RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 ZMYND15Q9H091 742 aa23.35■■□□□ 1.33
PCDHA13-203ENST00000617769 CLIP2Q9UDT6 1046 aa23.35■■□□□ 1.33
PCDHA13-203ENST00000617769 MYH14Q7Z406 1995 aaKnown RBP23.35■■□□□ 1.33
PCDHA13-203ENST00000617769 IQCB1Q15051 598 aa23.34■■□□□ 1.33
PCDHA13-203ENST00000617769 ZSCAN25Q6NSZ9 544 aa23.34■■□□□ 1.33
PCDHA13-203ENST00000617769 A0A087WWV3 80 aa23.34■■□□□ 1.33
PCDHA13-203ENST00000617769 FOXP2O15409 715 aa23.34■■□□□ 1.33
PCDHA13-203ENST00000617769 CAVIN2O95810 425 aa23.34■■□□□ 1.33
PCDHA13-203ENST00000617769 CHAF1AQ13111 956 aaPredicted RBP23.34■■□□□ 1.33
PCDHA13-203ENST00000617769 TICAM2Q86XR7 235 aa23.34■■□□□ 1.33
PCDHA13-203ENST00000617769 RIOK3O14730 519 aaKnown RBP23.33■■□□□ 1.33
PCDHA13-203ENST00000617769 ME1P48163 572 aa23.33■■□□□ 1.33
PCDHA13-203ENST00000617769 CCDC73Q6ZRK6 1079 aa23.33■■□□□ 1.33
PCDHA13-203ENST00000617769 ZNF396Q96N95 335 aaPredicted RBP23.33■■□□□ 1.33
PCDHA13-203ENST00000617769 CARMIL3Q8ND23 1372 aa23.33■■□□□ 1.33
PCDHA13-203ENST00000617769 GOLGA6L19H0YKK7 550 aa23.33■■□□□ 1.33
PCDHA13-203ENST00000617769 FDPSP14324 419 aaKnown RBP23.33■■□□□ 1.33
PCDHA13-203ENST00000617769 CCDC144BQ3MJ40 725 aa23.32■■□□□ 1.32
PCDHA13-203ENST00000617769 CCDC102BQ68D86 513 aa23.32■■□□□ 1.32
PCDHA13-203ENST00000617769 CCDC144CPQ8IYA2 1237 aa23.32■■□□□ 1.32
PCDHA13-203ENST00000617769 CTAGE5O15320 804 aa23.32■■□□□ 1.32
PCDHA13-203ENST00000617769 LINC00116Q8NCU8 138 aa23.32■■□□□ 1.32
PCDHA13-203ENST00000617769 ENGASEQ8NFI3 743 aa23.32■■□□□ 1.32
PCDHA13-203ENST00000617769 PIH1D3Q9NQM4 214 aaKnown RBP23.32■■□□□ 1.32
PCDHA13-203ENST00000617769 KINO60870 393 aaKnown RBP23.31■■□□□ 1.32
PCDHA13-203ENST00000617769 STX1AQ16623 288 aa23.31■■□□□ 1.32
PCDHA13-203ENST00000617769 CACTINQ8WUQ7 758 aaKnown RBP23.31■■□□□ 1.32
PCDHA13-203ENST00000617769 ERCC4Q92889 916 aaPredicted RBP23.31■■□□□ 1.32
PCDHA13-203ENST00000617769 BCL2L12Q9HB09 334 aa23.31■■□□□ 1.32
PCDHA13-203ENST00000617769 MYH3P11055 1940 aa23.31■■□□□ 1.32
PCDHA13-203ENST00000617769 IDH1O75874 414 aaKnown RBP23.31■■□□□ 1.32
PCDHA13-203ENST00000617769 FAM160A1Q05DH4 1040 aa23.31■■□□□ 1.32
PCDHA13-203ENST00000617769 ATL3Q6DD88 541 aa23.31■■□□□ 1.32
PCDHA13-203ENST00000617769 FSIP1Q8NA03 581 aa23.31■■□□□ 1.32
PCDHA13-203ENST00000617769 OTUD7BQ6GQQ9 843 aa23.3■■□□□ 1.32
PCDHA13-203ENST00000617769 BICDL1Q6ZP65 573 aa23.3■■□□□ 1.32
PCDHA13-203ENST00000617769 C16orf45Q96MC5 204 aaPredicted RBP23.3■■□□□ 1.32
PCDHA13-203ENST00000617769 MPHOSPH8Q99549 860 aa23.3■■□□□ 1.32
PCDHA13-203ENST00000617769 SLC9C2Q5TAH2 1124 aa23.3■■□□□ 1.32
PCDHA13-203ENST00000617769 NTSR2O95665 410 aa23.29■■□□□ 1.32
PCDHA13-203ENST00000617769 FGAP02671 866 aa23.29■■□□□ 1.32
PCDHA13-203ENST00000617769 SPEF2Q9C093 1822 aa23.29■■□□□ 1.32
PCDHA13-203ENST00000617769 APPBP2Q92624 585 aa23.29■■□□□ 1.32
PCDHA13-203ENST00000617769 PCDHA7Q9UN72 937 aa23.29■■□□□ 1.32
PCDHA13-203ENST00000617769 GPAA1O43292 621 aa23.28■■□□□ 1.32
PCDHA13-203ENST00000617769 EVCP57679 992 aa23.28■■□□□ 1.32
PCDHA13-203ENST00000617769 PUM3Q15397 648 aaKnown RBP23.28■■□□□ 1.32
PCDHA13-203ENST00000617769 IMMTQ16891 758 aaKnown RBP23.28■■□□□ 1.32
PCDHA13-203ENST00000617769 SARM1Q6SZW1 724 aa23.28■■□□□ 1.32
PCDHA13-203ENST00000617769 FBXL16Q8N461 479 aa23.28■■□□□ 1.32
PCDHA13-203ENST00000617769 NWD2Q9ULI1 1742 aa23.27■■□□□ 1.32
PCDHA13-203ENST00000617769 BCL9LQ86UU0 1499 aa23.27■■□□□ 1.32
PCDHA13-203ENST00000617769 BECN2A8MW95 431 aa23.27■■□□□ 1.32
PCDHA13-203ENST00000617769 ZFYP08048 801 aaPredicted RBP23.27■■□□□ 1.32
PCDHA13-203ENST00000617769 CDC25BP30305 580 aa23.27■■□□□ 1.32
PCDHA13-203ENST00000617769 RAB11FIP4Q86YS3 637 aa23.27■■□□□ 1.32
PCDHA13-203ENST00000617769 SMARCC1Q92922 1105 aaPredicted RBP23.27■■□□□ 1.32
PCDHA13-203ENST00000617769 CTNNA3Q9UI47 895 aa23.27■■□□□ 1.32
PCDHA13-203ENST00000617769 LRRFIP1Q32MZ4 808 aaKnown RBP23.27■■□□□ 1.31
PCDHA13-203ENST00000617769 C3orf67Q6ZVT6 689 aa23.27■■□□□ 1.31
PCDHA13-203ENST00000617769 DHX40Q8IX18 779 aaKnown RBP23.27■■□□□ 1.31
PCDHA13-203ENST00000617769 LPIN2Q92539 896 aa23.27■■□□□ 1.31
PCDHA13-203ENST00000617769 FBXW7Q969H0 707 aa23.27■■□□□ 1.31
PCDHA13-203ENST00000617769 CCDC94Q9BW85 323 aaPredicted RBP23.27■■□□□ 1.31
PCDHA13-203ENST00000617769 WWC3Q9ULE0 1092 aa23.27■■□□□ 1.31
PCDHA13-203ENST00000617769 WTIPA6NIX2 430 aaPredicted RBP23.26■■□□□ 1.31
PCDHA13-203ENST00000617769 PRC1O43663 620 aa23.26■■□□□ 1.31
PCDHA13-203ENST00000617769 POLR3DP05423 398 aaPredicted RBP23.26■■□□□ 1.31
PCDHA13-203ENST00000617769 FGFR2P21802 821 aa23.26■■□□□ 1.31
PCDHA13-203ENST00000617769 ARID5BQ14865 1188 aa23.26■■□□□ 1.31
PCDHA13-203ENST00000617769 PARP10Q53GL7 1025 aa23.26■■□□□ 1.31
PCDHA13-203ENST00000617769 MROH5Q6ZUA9 1318 aa23.26■■□□□ 1.31
PCDHA13-203ENST00000617769 A0A1B0GVL5 298 aa23.25■■□□□ 1.31
PCDHA13-203ENST00000617769 GJB4Q9NTQ9 266 aa23.25■■□□□ 1.31
PCDHA13-203ENST00000617769 ANO10Q9NW15 660 aa23.25■■□□□ 1.31
PCDHA13-203ENST00000617769 RTEL1Q9NZ71 1219 aa23.25■■□□□ 1.31
PCDHA13-203ENST00000617769 KLF18A0A0U1RQI7 1052 aa23.25■■□□□ 1.31
PCDHA13-203ENST00000617769 ADD2P35612 726 aa23.25■■□□□ 1.31
PCDHA13-203ENST00000617769 FMR1NBQ8N0W7 255 aaPredicted RBP23.25■■□□□ 1.31
PCDHA13-203ENST00000617769 MRPS27Q92552 414 aaKnown RBP23.25■■□□□ 1.31
PCDHA13-203ENST00000617769 CHMP4CQ96CF2 233 aa23.25■■□□□ 1.31
PCDHA13-203ENST00000617769 MRFAP1L1Q96HT8 127 aa23.25■■□□□ 1.31
PCDHA13-203ENST00000617769 C8orf76Q96K31 380 aa23.25■■□□□ 1.31
PCDHA13-203ENST00000617769 CLIC4Q9Y696 253 aa23.25■■□□□ 1.31
PCDHA13-203ENST00000617769 AKAP11Q9UKA4 1901 aa23.25■■□□□ 1.31
PCDHA13-203ENST00000617769 VPS72Q15906 364 aa23.24■■□□□ 1.31
PCDHA13-203ENST00000617769 ERFEQ4G0M1 354 aa23.24■■□□□ 1.31
PCDHA13-203ENST00000617769 CCDC152Q4G0S7 254 aa23.24■■□□□ 1.31
PCDHA13-203ENST00000617769 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.24■■□□□ 1.31
PCDHA13-203ENST00000617769 DENND2AQ9ULE3 1009 aa23.24■■□□□ 1.31
PCDHA13-203ENST00000617769 HPS5Q9UPZ3 1129 aa23.24■■□□□ 1.31
PCDHA13-203ENST00000617769 ZNF532Q9HCE3 1301 aa23.24■■□□□ 1.31
PCDHA13-203ENST00000617769 GOLGA8BA8MQT2 603 aa23.24■■□□□ 1.31
PCDHA13-203ENST00000617769 BCAMP50895 628 aa23.24■■□□□ 1.31
PCDHA13-203ENST00000617769 ADALQ6DHV7 355 aa23.24■■□□□ 1.31
PCDHA13-203ENST00000617769 LRRC8AQ8IWT6 810 aa23.24■■□□□ 1.31
PCDHA13-203ENST00000617769 MB21D2Q8IYB1 491 aaPredicted RBP23.24■■□□□ 1.31
PCDHA13-203ENST00000617769 TNNT1P13805 278 aa23.23■■□□□ 1.31
PCDHA13-203ENST00000617769 NDUFA8P51970 172 aa23.23■■□□□ 1.31
PCDHA13-203ENST00000617769 ANTXR2P58335 489 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms