RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 WDHD1O75717 1129 aaPredicted RBP17.54■□□□□ 0.4
PTPRT-210ENST00000617474 KIF5AQ12840 1032 aa17.54■□□□□ 0.4
PTPRT-210ENST00000617474 MTX1Q13505 466 aa17.54■□□□□ 0.4
PTPRT-210ENST00000617474 CCDC42Q96M95 316 aa17.54■□□□□ 0.4
PTPRT-210ENST00000617474 ZEB2O60315 1214 aa17.54■□□□□ 0.4
PTPRT-210ENST00000617474 MBD4O95243 580 aa17.54■□□□□ 0.4
PTPRT-210ENST00000617474 KRBA2Q6ZNG9 492 aa17.54■□□□□ 0.4
PTPRT-210ENST00000617474 EHBP1Q8NDI1 1231 aa17.54■□□□□ 0.4
PTPRT-210ENST00000617474 GSTTP1A0A1W2PQM5 241 aa17.54■□□□□ 0.4
PTPRT-210ENST00000617474 GPAA1O43292 621 aa17.54■□□□□ 0.4
PTPRT-210ENST00000617474 ATL3Q6DD88 541 aa17.54■□□□□ 0.4
PTPRT-210ENST00000617474 DIS3L2Q8IYB7 885 aaKnown RBP17.54■□□□□ 0.4
PTPRT-210ENST00000617474 CRACR2BQ8N4Y2 399 aaPredicted RBP17.54■□□□□ 0.4
PTPRT-210ENST00000617474 SPAG5Q96R06 1193 aa17.54■□□□□ 0.4
PTPRT-210ENST00000617474 CDC5LQ99459 802 aaKnown RBP17.54■□□□□ 0.4
PTPRT-210ENST00000617474 ZSWIM6Q9HCJ5 1215 aa17.54■□□□□ 0.4
PTPRT-210ENST00000617474 HELLSQ9NRZ9 838 aa17.54■□□□□ 0.4
PTPRT-210ENST00000617474 BCORL1Q5H9F3 1711 aa17.54■□□□□ 0.4
PTPRT-210ENST00000617474 CKAP4Q07065 602 aaKnown RBP17.53■□□□□ 0.4
PTPRT-210ENST00000617474 GCKRQ14397 625 aa17.53■□□□□ 0.4
PTPRT-210ENST00000617474 MICALL1Q8N3F8 863 aa17.53■□□□□ 0.4
PTPRT-210ENST00000617474 LLPHQ9BRT6 129 aaKnown RBP17.53■□□□□ 0.4
PTPRT-210ENST00000617474 METTL22Q9BUU2 404 aaPredicted RBP17.53■□□□□ 0.4
PTPRT-210ENST00000617474 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.53■□□□□ 0.4
PTPRT-210ENST00000617474 LUC7L2Q9Y383 392 aaKnown RBP17.53■□□□□ 0.4
PTPRT-210ENST00000617474 KIAA0232Q92628 1395 aa17.53■□□□□ 0.4
PTPRT-210ENST00000617474 hCG_1642624A0A1W2PR95 340 aa17.53■□□□□ 0.4
PTPRT-210ENST00000617474 IBTKQ9P2D0 1353 aaPredicted RBP17.53■□□□□ 0.4
PTPRT-210ENST00000617474 KRT86O43790 486 aa17.53■□□□□ 0.4
PTPRT-210ENST00000617474 HSF2BPO75031 334 aa17.53■□□□□ 0.4
PTPRT-210ENST00000617474 PRDM1O75626 825 aa17.53■□□□□ 0.4
PTPRT-210ENST00000617474 PIP4K2BP78356 416 aa17.53■□□□□ 0.4
PTPRT-210ENST00000617474 FAM114A1Q8IWE2 563 aa17.53■□□□□ 0.4
PTPRT-210ENST00000617474 PBRM1Q86U86 1689 aa17.53■□□□□ 0.4
PTPRT-210ENST00000617474 EXOC5O00471 708 aa17.53■□□□□ 0.4
PTPRT-210ENST00000617474 CTNNBL1Q8WYA6 563 aaPredicted RBP17.53■□□□□ 0.4
PTPRT-210ENST00000617474 A1BGP04217 495 aa17.52■□□□□ 0.4
PTPRT-210ENST00000617474 CCDC122Q5T0U0 273 aa17.52■□□□□ 0.4
PTPRT-210ENST00000617474 LSG1Q9H089 658 aaKnown RBP17.52■□□□□ 0.4
PTPRT-210ENST00000617474 ANGEL1Q9UNK9 670 aaKnown RBP17.52■□□□□ 0.4
PTPRT-210ENST00000617474 RGS12O14924 1447 aa17.52■□□□□ 0.4
PTPRT-210ENST00000617474 SBNO1A3KN83 1393 aa17.52■□□□□ 0.4
PTPRT-210ENST00000617474 LARGE1O95461 756 aa17.52■□□□□ 0.4
PTPRT-210ENST00000617474 BMP15O95972 392 aa17.52■□□□□ 0.4
PTPRT-210ENST00000617474 ADKP55263 362 aaKnown RBP17.52■□□□□ 0.39
PTPRT-210ENST00000617474 PTPN21Q16825 1174 aa17.52■□□□□ 0.39
PTPRT-210ENST00000617474 NAA16Q6N069 864 aaPredicted RBP17.52■□□□□ 0.39
PTPRT-210ENST00000617474 ZNF496Q96IT1 587 aaPredicted RBP17.52■□□□□ 0.39
PTPRT-210ENST00000617474 ZPR1O75312 459 aa17.51■□□□□ 0.39
PTPRT-210ENST00000617474 IVLP07476 585 aa17.51■□□□□ 0.39
PTPRT-210ENST00000617474 CUL4AQ13619 759 aa17.51■□□□□ 0.39
PTPRT-210ENST00000617474 KRT40Q6A162 431 aa17.51■□□□□ 0.39
PTPRT-210ENST00000617474 FTOQ9C0B1 505 aaKnown RBP eCLIP17.51■□□□□ 0.39
PTPRT-210ENST00000617474 KCNJ14Q9UNX9 436 aa17.51■□□□□ 0.39
PTPRT-210ENST00000617474 E7EWF7 191 aa17.51■□□□□ 0.39
PTPRT-210ENST00000617474 TACC1O75410 805 aa17.51■□□□□ 0.39
PTPRT-210ENST00000617474 ERCC3P19447 782 aa17.51■□□□□ 0.39
PTPRT-210ENST00000617474 TEX13AQ9BXU3 409 aaPredicted RBP17.51■□□□□ 0.39
PTPRT-210ENST00000617474 IRS4O14654 1257 aaPredicted RBP17.51■□□□□ 0.39
PTPRT-210ENST00000617474 CHMP4BP1P59074 171 aa17.51■□□□□ 0.39
PTPRT-210ENST00000617474 GDAP1L1Q96MZ0 367 aa17.51■□□□□ 0.39
PTPRT-210ENST00000617474 PYM1Q9BRP8 204 aaKnown RBP17.51■□□□□ 0.39
PTPRT-210ENST00000617474 DESI2Q9BSY9 194 aa17.51■□□□□ 0.39
PTPRT-210ENST00000617474 PNOCQ13519 176 aa17.51■□□□□ 0.39
PTPRT-210ENST00000617474 PLCD3Q8N3E9 789 aa17.51■□□□□ 0.39
PTPRT-210ENST00000617474 IQUBQ8NA54 791 aa17.51■□□□□ 0.39
PTPRT-210ENST00000617474 MRVI1Q9Y6F6 885 aa17.51■□□□□ 0.39
PTPRT-210ENST00000617474 UGGT1Q9NYU2 1555 aa17.5■□□□□ 0.39
PTPRT-210ENST00000617474 TICAM2Q86XR7 235 aa17.5■□□□□ 0.39
PTPRT-210ENST00000617474 IFT81Q8WYA0 676 aa17.5■□□□□ 0.39
PTPRT-210ENST00000617474 XAGE2Q96GT9 111 aa17.5■□□□□ 0.39
PTPRT-210ENST00000617474 CRNKL1Q9BZJ0 848 aaKnown RBP17.5■□□□□ 0.39
PTPRT-210ENST00000617474 KIAA1468Q9P260 1216 aa17.5■□□□□ 0.39
PTPRT-210ENST00000617474 ATP10AO60312 1499 aa17.5■□□□□ 0.39
PTPRT-210ENST00000617474 KDM5AP29375 1690 aaKnown RBP17.5■□□□□ 0.39
PTPRT-210ENST00000617474 NLRP12P59046 1061 aa17.5■□□□□ 0.39
PTPRT-210ENST00000617474 MICALCLQ6ZW33 695 aa17.5■□□□□ 0.39
PTPRT-210ENST00000617474 CACTINQ8WUQ7 758 aaKnown RBP17.5■□□□□ 0.39
PTPRT-210ENST00000617474 ZNF827Q17R98 1081 aa17.5■□□□□ 0.39
PTPRT-210ENST00000617474 CNGA4Q8IV77 575 aa17.5■□□□□ 0.39
PTPRT-210ENST00000617474 TLR7Q9NYK1 1049 aaKnown RBP17.5■□□□□ 0.39
PTPRT-210ENST00000617474 PLA2R1Q13018 1463 aa17.5■□□□□ 0.39
PTPRT-210ENST00000617474 KIF24Q5T7B8 1368 aa17.5■□□□□ 0.39
PTPRT-210ENST00000617474 VGLL3A8MV65 326 aa17.5■□□□□ 0.39
PTPRT-210ENST00000617474 KRT2P35908 639 aa17.5■□□□□ 0.39
PTPRT-210ENST00000617474 MYSM1Q5VVJ2 828 aa17.5■□□□□ 0.39
PTPRT-210ENST00000617474 LRRC8AQ8IWT6 810 aa17.5■□□□□ 0.39
PTPRT-210ENST00000617474 TARBP1Q13395 1621 aaKnown RBP17.49■□□□□ 0.39
PTPRT-210ENST00000617474 GOLGA6L10A0A0M3HER8 536 aa17.49■□□□□ 0.39
PTPRT-210ENST00000617474 GABPB1Q06547 395 aaPredicted RBP17.49■□□□□ 0.39
PTPRT-210ENST00000617474 OSBPL3Q9H4L5 887 aa17.49■□□□□ 0.39
PTPRT-210ENST00000617474 CTNND2Q9UQB3 1225 aa17.49■□□□□ 0.39
PTPRT-210ENST00000617474 C6orf229H3BNL8 230 aa17.49■□□□□ 0.39
PTPRT-210ENST00000617474 APPBP2Q92624 585 aa17.49■□□□□ 0.39
PTPRT-210ENST00000617474 ARMT1Q9H993 441 aa17.49■□□□□ 0.39
PTPRT-210ENST00000617474 TSPY3P0CV98 308 aa17.49■□□□□ 0.39
PTPRT-210ENST00000617474 TSPY8P0CW00 308 aa17.49■□□□□ 0.39
PTPRT-210ENST00000617474 KRT83P78385 493 aa17.49■□□□□ 0.39
PTPRT-210ENST00000617474 BEND3Q5T5X7 828 aa17.49■□□□□ 0.39
PTPRT-210ENST00000617474 ARHGAP6O43182 974 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms