RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 PIBF1Q8WXW3 757 aa16.22■□□□□ 0.19
CACNA1C-231ENST00000616390 ZNF396Q96N95 335 aaPredicted RBP16.22■□□□□ 0.19
CACNA1C-231ENST00000616390 KCNF1Q9H3M0 494 aa16.22■□□□□ 0.19
CACNA1C-231ENST00000616390 SEC31BQ9NQW1 1179 aa16.22■□□□□ 0.19
CACNA1C-231ENST00000616390 NWD2Q9ULI1 1742 aa16.22■□□□□ 0.19
CACNA1C-231ENST00000616390 MB21D2Q8IYB1 491 aaPredicted RBP16.22■□□□□ 0.19
CACNA1C-231ENST00000616390 AIFM3Q96NN9 605 aa16.22■□□□□ 0.19
CACNA1C-231ENST00000616390 ABCA3Q99758 1704 aa16.22■□□□□ 0.19
CACNA1C-231ENST00000616390 B4E1Z4 1266 aa16.21■□□□□ 0.19
CACNA1C-231ENST00000616390 PDE8AO60658 829 aa16.21■□□□□ 0.19
CACNA1C-231ENST00000616390 ADD2P35612 726 aa16.21■□□□□ 0.19
CACNA1C-231ENST00000616390 MYL10Q9BUA6 226 aa16.21■□□□□ 0.19
CACNA1C-231ENST00000616390 RCOR1Q9UKL0 485 aa16.21■□□□□ 0.19
CACNA1C-231ENST00000616390 IQSEC3Q9UPP2 1182 aaPredicted RBP16.21■□□□□ 0.19
CACNA1C-231ENST00000616390 CLIC4Q9Y696 253 aa16.21■□□□□ 0.19
CACNA1C-231ENST00000616390 STRCQ7RTU9 1775 aa16.21■□□□□ 0.19
CACNA1C-231ENST00000616390 KINO60870 393 aaKnown RBP16.21■□□□□ 0.19
CACNA1C-231ENST00000616390 CCDC186Q7Z3E2 898 aa16.21■□□□□ 0.19
CACNA1C-231ENST00000616390 TBC1D10CQ8IV04 446 aa16.21■□□□□ 0.19
CACNA1C-231ENST00000616390 SENP2Q9HC62 589 aa16.21■□□□□ 0.19
CACNA1C-231ENST00000616390 HPS5Q9UPZ3 1129 aa16.21■□□□□ 0.19
CACNA1C-231ENST00000616390 SALL1Q9NSC2 1324 aa16.2■□□□□ 0.18
CACNA1C-231ENST00000616390 FAM193AP78312 1265 aa16.2■□□□□ 0.18
CACNA1C-231ENST00000616390 STK38Q15208 465 aa16.2■□□□□ 0.18
CACNA1C-231ENST00000616390 C11orf57Q6ZUT1 292 aaPredicted RBP16.2■□□□□ 0.18
CACNA1C-231ENST00000616390 CYB5R4Q7L1T6 521 aa16.2■□□□□ 0.18
CACNA1C-231ENST00000616390 MICU3Q86XE3 530 aa16.2■□□□□ 0.18
CACNA1C-231ENST00000616390 TSC1Q92574 1164 aa16.2■□□□□ 0.18
CACNA1C-231ENST00000616390 AIDAQ96BJ3 306 aa16.2■□□□□ 0.18
CACNA1C-231ENST00000616390 MPHOSPH8Q99549 860 aa16.2■□□□□ 0.18
CACNA1C-231ENST00000616390 TOMM22Q9NS69 142 aa16.2■□□□□ 0.18
CACNA1C-231ENST00000616390 GOLGA6L6A8MZA4 724 aa16.2■□□□□ 0.18
CACNA1C-231ENST00000616390 LRMPQ12912 555 aa16.2■□□□□ 0.18
CACNA1C-231ENST00000616390 PCDHA7Q9UN72 937 aa16.2■□□□□ 0.18
CACNA1C-231ENST00000616390 MYH7P12883 1935 aa16.2■□□□□ 0.18
CACNA1C-231ENST00000616390 CDHR2Q9BYE9 1310 aa16.19■□□□□ 0.18
CACNA1C-231ENST00000616390 SUSD4Q5VX71 490 aa16.19■□□□□ 0.18
CACNA1C-231ENST00000616390 PHKBQ93100 1093 aa16.19■□□□□ 0.18
CACNA1C-231ENST00000616390 SDF4Q9BRK5 362 aa16.19■□□□□ 0.18
CACNA1C-231ENST00000616390 NBPF3Q9H094 633 aa16.19■□□□□ 0.18
CACNA1C-231ENST00000616390 AKAP11Q9UKA4 1901 aa16.19■□□□□ 0.18
CACNA1C-231ENST00000616390 GOLGA6L19H0YKK7 550 aa16.19■□□□□ 0.18
CACNA1C-231ENST00000616390 PDE6AP16499 860 aa16.19■□□□□ 0.18
CACNA1C-231ENST00000616390 ATP6V1AP38606 617 aa16.19■□□□□ 0.18
CACNA1C-231ENST00000616390 CTDSPL2Q05D32 466 aa16.19■□□□□ 0.18
CACNA1C-231ENST00000616390 RRP12Q5JTH9 1297 aaKnown RBP16.19■□□□□ 0.18
CACNA1C-231ENST00000616390 NFXL1Q6ZNB6 911 aa16.19■□□□□ 0.18
CACNA1C-231ENST00000616390 MAGEB6Q8N7X4 407 aa16.19■□□□□ 0.18
CACNA1C-231ENST00000616390 VGLL2Q8N8G2 317 aa16.19■□□□□ 0.18
CACNA1C-231ENST00000616390 NUP98P52948 1817 aa16.19■□□□□ 0.18
CACNA1C-231ENST00000616390 SNW1Q13573 536 aaKnown RBP16.18■□□□□ 0.18
CACNA1C-231ENST00000616390 ZSCAN25Q6NSZ9 544 aa16.18■□□□□ 0.18
CACNA1C-231ENST00000616390 MYH15Q9Y2K3 1946 aa16.18■□□□□ 0.18
CACNA1C-231ENST00000616390 BCL9O00512 1426 aa16.18■□□□□ 0.18
CACNA1C-231ENST00000616390 DHX16O60231 1041 aaKnown RBP16.18■□□□□ 0.18
CACNA1C-231ENST00000616390 KDM4FA0A1W2PPD8 638 aa16.18■□□□□ 0.18
CACNA1C-231ENST00000616390 BECN2A8MW95 431 aa16.18■□□□□ 0.18
CACNA1C-231ENST00000616390 KIF28PB7ZC32 967 aa16.18■□□□□ 0.18
CACNA1C-231ENST00000616390 TTF1Q15361 905 aaPredicted RBP16.18■□□□□ 0.18
CACNA1C-231ENST00000616390 SYNE3Q6ZMZ3 975 aa16.18■□□□□ 0.18
CACNA1C-231ENST00000616390 RBM43Q6ZSC3 357 aaKnown RBP16.18■□□□□ 0.18
CACNA1C-231ENST00000616390 CCDC82Q8N4S0 544 aa16.18■□□□□ 0.18
CACNA1C-231ENST00000616390 ARMT1Q9H993 441 aa16.18■□□□□ 0.18
CACNA1C-231ENST00000616390 MYH3P11055 1940 aa16.18■□□□□ 0.18
CACNA1C-231ENST00000616390 UBE2Q2LH0YL09 131 aa16.17■□□□□ 0.18
CACNA1C-231ENST00000616390 MARCKSP29966 332 aaPredicted RBP16.17■□□□□ 0.18
CACNA1C-231ENST00000616390 PLCD4Q9BRC7 762 aa16.17■□□□□ 0.18
CACNA1C-231ENST00000616390 ZKSCAN3Q9BRR0 538 aa16.17■□□□□ 0.18
CACNA1C-231ENST00000616390 SPEF2Q9C093 1822 aa16.17■□□□□ 0.18
CACNA1C-231ENST00000616390 METAP2P50579 478 aaKnown RBP eCLIP16.17■□□□□ 0.18
CACNA1C-231ENST00000616390 BCAMP50895 628 aa16.17■□□□□ 0.18
CACNA1C-231ENST00000616390 NDUFA8P51970 172 aa16.17■□□□□ 0.18
CACNA1C-231ENST00000616390 GNL2Q13823 731 aaKnown RBP16.17■□□□□ 0.18
CACNA1C-231ENST00000616390 PUM3Q15397 648 aaKnown RBP16.17■□□□□ 0.18
CACNA1C-231ENST00000616390 ISM2Q6H9L7 571 aa16.17■□□□□ 0.18
CACNA1C-231ENST00000616390 FBXO18Q8NFZ0 1043 aa16.17■□□□□ 0.18
CACNA1C-231ENST00000616390 PDCL3Q9H2J4 239 aa16.17■□□□□ 0.18
CACNA1C-231ENST00000616390 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.17■□□□□ 0.18
CACNA1C-231ENST00000616390 NUTM2BA6NNL0 878 aaPredicted RBP16.16■□□□□ 0.18
CACNA1C-231ENST00000616390 NUTM2EB1AL46 878 aaPredicted RBP16.16■□□□□ 0.18
CACNA1C-231ENST00000616390 BIN1O00499 593 aa16.16■□□□□ 0.18
CACNA1C-231ENST00000616390 PRKAB2O43741 272 aa16.16■□□□□ 0.18
CACNA1C-231ENST00000616390 ZNF75DP51815 510 aa16.16■□□□□ 0.18
CACNA1C-231ENST00000616390 KCNQ4P56696 695 aa16.16■□□□□ 0.18
CACNA1C-231ENST00000616390 FAM160A1Q05DH4 1040 aa16.16■□□□□ 0.18
CACNA1C-231ENST00000616390 NUTM2AQ8IVF1 878 aaPredicted RBP16.16■□□□□ 0.18
CACNA1C-231ENST00000616390 SPATA5Q8NB90 893 aa16.16■□□□□ 0.18
CACNA1C-231ENST00000616390 CLIP2Q9UDT6 1046 aa16.16■□□□□ 0.18
CACNA1C-231ENST00000616390 MBD4O95243 580 aa16.16■□□□□ 0.18
CACNA1C-231ENST00000616390 IL6STP40189 918 aaPredicted RBP16.16■□□□□ 0.18
CACNA1C-231ENST00000616390 RASGRF1Q13972 1273 aa16.16■□□□□ 0.18
CACNA1C-231ENST00000616390 LPIN2Q92539 896 aa16.16■□□□□ 0.18
CACNA1C-231ENST00000616390 ANGEL1Q9UNK9 670 aaKnown RBP16.16■□□□□ 0.18
CACNA1C-231ENST00000616390 NEDD4P46934 1319 aa16.16■□□□□ 0.18
CACNA1C-231ENST00000616390 CDC27P30260 824 aa16.15■□□□□ 0.18
CACNA1C-231ENST00000616390 MIGA1Q8NAN2 632 aa16.15■□□□□ 0.18
CACNA1C-231ENST00000616390 VGLL3A8MV65 326 aa16.15■□□□□ 0.18
CACNA1C-231ENST00000616390 CRKLP46109 303 aaKnown RBP16.15■□□□□ 0.18
CACNA1C-231ENST00000616390 SMIM5Q71RC9 77 aa16.15■□□□□ 0.18
CACNA1C-231ENST00000616390 ZNF34Q8IZ26 560 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms