RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 AK9Q5TCS8 1911 aa13.25□□□□□ -0.29
RABGAP1-213ENST00000616002 SF3B3Q15393 1217 aaKnown RBP13.25□□□□□ -0.29
RABGAP1-213ENST00000616002 SASS6Q6UVJ0 657 aa13.25□□□□□ -0.29
RABGAP1-213ENST00000616002 ANKRD13DQ6ZTN6 518 aa13.25□□□□□ -0.29
RABGAP1-213ENST00000616002 TMEM87AQ8NBN3 555 aa13.25□□□□□ -0.29
RABGAP1-213ENST00000616002 CCDC102AQ96A19 550 aa13.25□□□□□ -0.29
RABGAP1-213ENST00000616002 FAM89AQ96GI7 184 aa13.25□□□□□ -0.29
RABGAP1-213ENST00000616002 EYA3Q99504 573 aa13.25□□□□□ -0.29
RABGAP1-213ENST00000616002 CHMP4AQ9BY43 222 aa13.25□□□□□ -0.29
RABGAP1-213ENST00000616002 SALL3Q9BXA9 1300 aa13.25□□□□□ -0.29
RABGAP1-213ENST00000616002 ECE2O60344 883 aa13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 EGFRP00533 1210 aa13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 NCLP19338 710 aaKnown RBP13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 ZNF157P51786 506 aaPredicted RBP13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 PDE1AP54750 535 aa13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 DOK7Q18PE1 504 aa13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 KRT24Q2M2I5 525 aa13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 HDGFL1Q5TGJ6 251 aa13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 STAP2Q9UGK3 403 aa13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 POLLQ9UGP5 575 aa13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 DDX60Q8IY21 1712 aaKnown RBP13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 FAM155AB1AL88 458 aaPredicted RBP13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 ADM5C9JUS6 153 aa13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 ATP5J2-PTCD1G3V325 749 aa13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 STK25O00506 426 aa13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 GPSM2P81274 684 aa13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 TMCO4Q5TGY1 634 aa13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 SULF1Q8IWU6 871 aa13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 TMX3Q96JJ7 454 aa13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 SAGE1Q9NXZ1 904 aa13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 TMEM63CQ9P1W3 806 aa13.24□□□□□ -0.29
RABGAP1-213ENST00000616002 CACNA1FO60840 1977 aa13.23□□□□□ -0.29
RABGAP1-213ENST00000616002 POLR2AP24928 1970 aaKnown RBP13.23□□□□□ -0.29
RABGAP1-213ENST00000616002 G3V3G9 751 aa13.23□□□□□ -0.29
RABGAP1-213ENST00000616002 KIF23Q02241 960 aaPredicted RBP13.23□□□□□ -0.29
RABGAP1-213ENST00000616002 KIF4BQ2VIQ3 1234 aa13.23□□□□□ -0.29
RABGAP1-213ENST00000616002 DCAF8Q5TAQ9 597 aa13.23□□□□□ -0.29
RABGAP1-213ENST00000616002 ISCA1Q9BUE6 129 aa13.23□□□□□ -0.29
RABGAP1-213ENST00000616002 ZC3H12CQ9C0D7 883 aaKnown RBP13.23□□□□□ -0.29
RABGAP1-213ENST00000616002 TSPY26PQ9H489 355 aa13.23□□□□□ -0.29
RABGAP1-213ENST00000616002 KCNQ5Q9NR82 932 aa13.23□□□□□ -0.29
RABGAP1-213ENST00000616002 RYDENQ9NUL5 291 aaKnown RBP13.23□□□□□ -0.29
RABGAP1-213ENST00000616002 DBF4Q9UBU7 674 aaPredicted RBP13.23□□□□□ -0.29
RABGAP1-213ENST00000616002 RTL9Q8NET4 1388 aa13.23□□□□□ -0.29
RABGAP1-213ENST00000616002 IRS4O14654 1257 aaPredicted RBP13.22□□□□□ -0.29
RABGAP1-213ENST00000616002 TRPA1O75762 1119 aa13.22□□□□□ -0.29
RABGAP1-213ENST00000616002 RPS8P62241 208 aaKnown RBP13.22□□□□□ -0.29
RABGAP1-213ENST00000616002 ZGPATQ8N5A5 531 aaKnown RBP13.22□□□□□ -0.29
RABGAP1-213ENST00000616002 TBC1D16Q8TBP0 767 aa13.22□□□□□ -0.29
RABGAP1-213ENST00000616002 PRIMPOLQ96LW4 560 aa13.22□□□□□ -0.29
RABGAP1-213ENST00000616002 ESYT1Q9BSJ8 1104 aa13.22□□□□□ -0.29
RABGAP1-213ENST00000616002 RNF39Q9H2S5 420 aa13.22□□□□□ -0.29
RABGAP1-213ENST00000616002 GGA3Q9NZ52 723 aa13.22□□□□□ -0.29
RABGAP1-213ENST00000616002 ELL2O00472 640 aaPredicted RBP13.21□□□□□ -0.29
RABGAP1-213ENST00000616002 HOXB7P09629 217 aa13.21□□□□□ -0.29
RABGAP1-213ENST00000616002 PKP1Q13835 747 aa13.21□□□□□ -0.29
RABGAP1-213ENST00000616002 FOXD4L5Q5VV16 416 aaPredicted RBP13.21□□□□□ -0.29
RABGAP1-213ENST00000616002 FOXD4L4Q8WXT5 416 aaPredicted RBP13.21□□□□□ -0.29
RABGAP1-213ENST00000616002 HYPKQ9NX55 129 aa13.21□□□□□ -0.29
RABGAP1-213ENST00000616002 RNF186Q9NXI6 227 aa13.21□□□□□ -0.29
RABGAP1-213ENST00000616002 ANKIB1Q9P2G1 1089 aa13.21□□□□□ -0.29
RABGAP1-213ENST00000616002 GNAI2P04899 355 aa13.2□□□□□ -0.3
RABGAP1-213ENST00000616002 GNAI3P08754 354 aa13.2□□□□□ -0.3
RABGAP1-213ENST00000616002 VIL1P09327 827 aaKnown RBP13.2□□□□□ -0.3
RABGAP1-213ENST00000616002 NEK4P51957 841 aa13.2□□□□□ -0.3
RABGAP1-213ENST00000616002 HMGN5P82970 282 aaKnown RBP13.2□□□□□ -0.3
RABGAP1-213ENST00000616002 R3HCC1Q9Y3T6 440 aaKnown RBP13.2□□□□□ -0.3
RABGAP1-213ENST00000616002 AKAP11Q9UKA4 1901 aa13.2□□□□□ -0.3
RABGAP1-213ENST00000616002 UFL1O94874 794 aa13.2□□□□□ -0.3
RABGAP1-213ENST00000616002 SLC10A3P09131 477 aa13.2□□□□□ -0.3
RABGAP1-213ENST00000616002 GTF2F1P35269 517 aaKnown RBP eCLIP13.2□□□□□ -0.3
RABGAP1-213ENST00000616002 TRIM28Q13263 835 aaKnown RBP13.2□□□□□ -0.3
RABGAP1-213ENST00000616002 OTUD7AQ8TE49 926 aaPredicted RBP13.2□□□□□ -0.3
RABGAP1-213ENST00000616002 UQCRHLA0A096LP55 91 aa13.19□□□□□ -0.3
RABGAP1-213ENST00000616002 SYCE3A1L190 88 aa13.19□□□□□ -0.3
RABGAP1-213ENST00000616002 TPM3P06753 285 aa13.19□□□□□ -0.3
RABGAP1-213ENST00000616002 UQCRHP07919 91 aa13.19□□□□□ -0.3
RABGAP1-213ENST00000616002 SMAP1Q8IYB5 467 aaPredicted RBP13.19□□□□□ -0.3
RABGAP1-213ENST00000616002 CDCA5Q96FF9 252 aa13.19□□□□□ -0.3
RABGAP1-213ENST00000616002 CSRNP1Q96S65 589 aa13.19□□□□□ -0.3
RABGAP1-213ENST00000616002 MEIS3Q99687 375 aa13.19□□□□□ -0.3
RABGAP1-213ENST00000616002 GGA1Q9UJY5 639 aa13.19□□□□□ -0.3
RABGAP1-213ENST00000616002 COL4A1P02462 1669 aa13.19□□□□□ -0.3
RABGAP1-213ENST00000616002 PDE4DIPQ5VU43 2346 aa13.18□□□□□ -0.3
RABGAP1-213ENST00000616002 ASTN2O75129 1339 aaPredicted RBP13.18□□□□□ -0.3
RABGAP1-213ENST00000616002 SCN9AQ15858 1988 aa13.18□□□□□ -0.3
RABGAP1-213ENST00000616002 RIOK3O14730 519 aaKnown RBP13.18□□□□□ -0.3
RABGAP1-213ENST00000616002 CHMLP26374 656 aa13.18□□□□□ -0.3
RABGAP1-213ENST00000616002 SOX10P56693 466 aa13.18□□□□□ -0.3
RABGAP1-213ENST00000616002 ANGEL2Q5VTE6 544 aaKnown RBP13.18□□□□□ -0.3
RABGAP1-213ENST00000616002 RIC3Q7Z5B4 369 aa13.18□□□□□ -0.3
RABGAP1-213ENST00000616002 REM2Q8IYK8 340 aaPredicted RBP13.18□□□□□ -0.3
RABGAP1-213ENST00000616002 ZBTB38Q8NAP3 1195 aaPredicted RBP13.18□□□□□ -0.3
RABGAP1-213ENST00000616002 AGBL3Q8NEM8 1001 aa13.18□□□□□ -0.3
RABGAP1-213ENST00000616002 LRRCC1Q9C099 1032 aa13.18□□□□□ -0.3
RABGAP1-213ENST00000616002 SEC31BQ9NQW1 1179 aa13.18□□□□□ -0.3
RABGAP1-213ENST00000616002 PCDH10Q9P2E7 1040 aa13.18□□□□□ -0.3
RABGAP1-213ENST00000616002 ZNF280AP59817 542 aaPredicted RBP13.17□□□□□ -0.3
RABGAP1-213ENST00000616002 FKBP1BP68106 108 aa13.17□□□□□ -0.3
RABGAP1-213ENST00000616002 ATP8B2P98198 1209 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms