RNA–Protein interactions for RNA: ENST00000615940.4

LRTOMT-222, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, human

TSL 5 BASIC

Gene LRTOMT, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTOMT-222	ENST00000615940	DHX36	Q9H2U1	1008 aa	Known RBP	11.22	□□□□□ -0.61
LRTOMT-222	ENST00000615940	FCHSD2	O94868	740 aa		11.21	□□□□□ -0.61
LRTOMT-222	ENST00000615940	FGA	P02671	866 aa		11.21	□□□□□ -0.61
LRTOMT-222	ENST00000615940	MSL3P1	P0C860	447 aa		11.21	□□□□□ -0.61
LRTOMT-222	ENST00000615940	COL6A1	P12109	1028 aa		11.21	□□□□□ -0.61
LRTOMT-222	ENST00000615940	SLC7A5	Q01650	507 aa		11.21	□□□□□ -0.61
LRTOMT-222	ENST00000615940	TRIM29	Q14134	588 aa		11.21	□□□□□ -0.61
LRTOMT-222	ENST00000615940	MTHFSD	Q2M296	383 aa	Known RBP	11.21	□□□□□ -0.61
LRTOMT-222	ENST00000615940	SYNE3	Q6ZMZ3	975 aa		11.21	□□□□□ -0.61
LRTOMT-222	ENST00000615940	PLPP6	Q8IY26	295 aa		11.21	□□□□□ -0.61
LRTOMT-222	ENST00000615940	UHMK1	Q8TAS1	419 aa	Known RBP	11.21	□□□□□ -0.61
LRTOMT-222	ENST00000615940	SPOCK2	Q92563	424 aa		11.21	□□□□□ -0.61
LRTOMT-222	ENST00000615940	CENPT	Q96BT3	561 aa		11.21	□□□□□ -0.61
LRTOMT-222	ENST00000615940	POM121	Q96HA1	1249 aa		11.21	□□□□□ -0.61
LRTOMT-222	ENST00000615940	CDHR1	Q96JP9	859 aa		11.21	□□□□□ -0.61
LRTOMT-222	ENST00000615940	UNC45A	Q9H3U1	944 aa		11.21	□□□□□ -0.61
LRTOMT-222	ENST00000615940	SLC45A1	Q9Y2W3	748 aa		11.21	□□□□□ -0.61
LRTOMT-222	ENST00000615940	CHMP3	Q9Y3E7	222 aa		11.21	□□□□□ -0.61
LRTOMT-222	ENST00000615940	BTAF1	O14981	1849 aa		11.21	□□□□□ -0.62
LRTOMT-222	ENST00000615940	VAMP4	O75379	141 aa		11.21	□□□□□ -0.62
LRTOMT-222	ENST00000615940	BBOX1	O75936	387 aa		11.21	□□□□□ -0.62
LRTOMT-222	ENST00000615940	MYBL2	P10244	700 aa		11.21	□□□□□ -0.62
LRTOMT-222	ENST00000615940	FAM160A1	Q05DH4	1040 aa		11.21	□□□□□ -0.62
LRTOMT-222	ENST00000615940	PRPF4B	Q13523	1007 aa	Known RBP	11.21	□□□□□ -0.62
LRTOMT-222	ENST00000615940	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.21	□□□□□ -0.62
LRTOMT-222	ENST00000615940	CCDC191	Q8NCU4	936 aa		11.21	□□□□□ -0.62
LRTOMT-222	ENST00000615940	DDX27	Q96GQ7	796 aa	Known RBP	11.21	□□□□□ -0.62
LRTOMT-222	ENST00000615940	PLEKHF1	Q96S99	279 aa		11.21	□□□□□ -0.62
LRTOMT-222	ENST00000615940	CASS4	Q9NQ75	786 aa		11.21	□□□□□ -0.62
LRTOMT-222	ENST00000615940	NPHP1	O15259	732 aa		11.2	□□□□□ -0.62
LRTOMT-222	ENST00000615940	RWDD2B	P57060	319 aa		11.2	□□□□□ -0.62
LRTOMT-222	ENST00000615940	MECOM	Q03112	1051 aa		11.2	□□□□□ -0.62
LRTOMT-222	ENST00000615940	INF2	Q27J81	1249 aa		11.2	□□□□□ -0.62
LRTOMT-222	ENST00000615940	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.2	□□□□□ -0.62
LRTOMT-222	ENST00000615940	RELL1	Q8IUW5	271 aa		11.2	□□□□□ -0.62
LRTOMT-222	ENST00000615940	TACO1	Q9BSH4	297 aa	Known RBP	11.2	□□□□□ -0.62
LRTOMT-222	ENST00000615940	CD248	Q9HCU0	757 aa		11.2	□□□□□ -0.62
LRTOMT-222	ENST00000615940	MKS1	Q9NXB0	559 aa		11.2	□□□□□ -0.62
LRTOMT-222	ENST00000615940	IP6K2	Q9UHH9	426 aa		11.2	□□□□□ -0.62
LRTOMT-222	ENST00000615940	SPG7	Q9UQ90	795 aa		11.2	□□□□□ -0.62
LRTOMT-222	ENST00000615940	PCDH11X	Q9BZA7	1347 aa		11.2	□□□□□ -0.62
LRTOMT-222	ENST00000615940	PCDH11Y	Q9BZA8	1340 aa		11.2	□□□□□ -0.62
LRTOMT-222	ENST00000615940	TNS1	Q9HBL0	1735 aa	Known RBP	11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	DYTN	A2CJ06	578 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	CARNS1	A5YM72	827 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	KRT38	O76015	456 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	HOXA10	P31260	410 aa	Predicted RBP	11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	CBX1	P83916	185 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	EIF2B5	Q13144	721 aa	Known RBP	11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	EFCAB13	Q8IY85	973 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	NLGN1	Q8N2Q7	840 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	TRIM6	Q9C030	488 aa	Predicted RBP	11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	N6AMT1	Q9Y5N5	214 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	UQCRHL	A0A096LP55	91 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940		F8VZ95	297 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	BOLA2-SMG1P6	H3BVE0	249 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	PRC1	O43663	620 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	UQCRH	P07919	91 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	ENPP1	P22413	925 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	PIK3CA	P42336	1068 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	SEPT2	Q15019	361 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	PTF1A	Q7RTS3	328 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	RPUSD2	Q8IZ73	545 aa	Known RBP	11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	SAMD14	Q8IZD0	417 aa	Predicted RBP	11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	ACSBG1	Q96GR2	724 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	CDK5RAP3	Q96JB5	506 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	NHS	Q6T4R5	1651 aa		11.19	□□□□□ -0.62
LRTOMT-222	ENST00000615940	SIPA1L3	O60292	1781 aa	Predicted RBP	11.18	□□□□□ -0.62
LRTOMT-222	ENST00000615940	MME	P08473	750 aa		11.18	□□□□□ -0.62
LRTOMT-222	ENST00000615940	PHKG2	P15735	406 aa		11.18	□□□□□ -0.62
LRTOMT-222	ENST00000615940	PDE6B	P35913	854 aa		11.18	□□□□□ -0.62
LRTOMT-222	ENST00000615940	MYLK4	Q86YV6	388 aa	Predicted RBP	11.18	□□□□□ -0.62
LRTOMT-222	ENST00000615940	FAM212A	Q96EL1	285 aa		11.18	□□□□□ -0.62
LRTOMT-222	ENST00000615940	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.18	□□□□□ -0.62
LRTOMT-222	ENST00000615940	TRMT1	Q9NXH9	659 aa	Known RBP	11.18	□□□□□ -0.62
LRTOMT-222	ENST00000615940	CPSF2	Q9P2I0	782 aa	Known RBP	11.18	□□□□□ -0.62
LRTOMT-222	ENST00000615940	RRP7A	Q9Y3A4	280 aa	Known RBP	11.18	□□□□□ -0.62
LRTOMT-222	ENST00000615940	CHL1	O00533	1208 aa		11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	USP5	P45974	858 aa		11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	NFE2L2	Q16236	605 aa		11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	MPRIP	Q6WCQ1	1025 aa		11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	IFNL2	Q8IZJ0	200 aa		11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	ATRIP	Q8WXE1	791 aa		11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	MAP3K14	Q99558	947 aa		11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	TRIM7	Q9C029	511 aa		11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	KDM6A	O15550	1401 aa	Predicted RBP	11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	ADAMTS7	Q9UKP4	1686 aa		11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	KCNQ2	O43526	872 aa		11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	RBP3	P10745	1247 aa		11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	SH3BGR	P55822	239 aa	Predicted RBP	11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	TRIML1	Q8N9V2	468 aa		11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	GABPB2	Q8TAK5	448 aa	Predicted RBP	11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	FEZ1	Q99689	392 aa		11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	BRINP2	Q9C0B6	783 aa		11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	RBSN	Q9H1K0	784 aa		11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.17	□□□□□ -0.62
LRTOMT-222	ENST00000615940	MAPK8IP3	Q9UPT6	1336 aa		11.16	□□□□□ -0.62
LRTOMT-222	ENST00000615940	UBE4A	Q14139	1066 aa		11.16	□□□□□ -0.62
LRTOMT-222	ENST00000615940	PREPL	Q4J6C6	727 aa	Predicted RBP	11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 63 ms