RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CIAO1O76071 339 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 POTEJP0CG39 1038 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 AK2P54819 239 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 CFAP100Q494V2 611 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 CCDC102BQ68D86 513 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 CHST3Q7LGC8 479 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 ZNF397Q8NF99 534 aaPredicted RBP10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 GJD4Q96KN9 370 aaPredicted RBP10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 USP26Q9BXU7 913 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 LEMD3Q9Y2U8 911 aa10.84□□□□□ -0.67
CLTCL1-208ENST00000615606 XDHP47989 1333 aa10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 NEXMIFQ5QGS0 1516 aa10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 LRRIQ1Q96JM4 1722 aa10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 SYCE3A1L190 88 aa10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 BBOX1O75936 387 aa10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 C8orf34Q49A92 452 aa10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 MED14O60244 1454 aa10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 PPEF1O14829 653 aaPredicted RBP10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 RPS6KA4O75676 772 aa10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 IBSPP21815 317 aaPredicted RBP10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 DPY19L2Q6NUT2 758 aa10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 TRMT2AQ8IZ69 625 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 GREM2Q9H772 168 aa10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 TTF2Q9UNY4 1162 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 RIMS1Q86UR5 1692 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 SGSM2O43147 1006 aa10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.83□□□□□ -0.689e-9■■■■■ 111.8
CLTCL1-208ENST00000615606 MYO6Q9UM54 1294 aa10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 ADAMTS13Q76LX8 1427 aa10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 CEP170BQ9Y4F5 1589 aaPredicted RBP10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 TRIM75PA6NK02 468 aa10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 B4E1Z4 1266 aa10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 TBCAO75347 108 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 KRT2P35908 639 aa10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 CLEC4GQ6UXB4 293 aa10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 NAP1L4Q99733 375 aaKnown RBP10.83□□□□□ -0.68
CLTCL1-208ENST00000615606 SEPT11Q9NVA2 429 aaKnown RBP10.82□□□□□ -0.68
CLTCL1-208ENST00000615606 ZNF804BA4D1E1 1349 aa10.82□□□□□ -0.68
CLTCL1-208ENST00000615606 SLC27A2O14975 620 aa10.82□□□□□ -0.68
CLTCL1-208ENST00000615606 UBE2HP62256 183 aa10.82□□□□□ -0.68
CLTCL1-208ENST00000615606 NLRP10Q86W26 655 aa10.82□□□□□ -0.68
CLTCL1-208ENST00000615606 GRPEL1Q9HAV7 217 aa10.82□□□□□ -0.68
CLTCL1-208ENST00000615606 GPR108Q9NPR9 543 aa10.82□□□□□ -0.68
CLTCL1-208ENST00000615606 PRAMEF22A3QJZ6 481 aa10.82□□□□□ -0.68
CLTCL1-208ENST00000615606 PDE8BO95263 885 aa10.82□□□□□ -0.68
CLTCL1-208ENST00000615606 ARHGAP27Q6ZUM4 889 aa10.82□□□□□ -0.68
CLTCL1-208ENST00000615606 CCDC150Q8NCX0 1101 aa10.82□□□□□ -0.68
CLTCL1-208ENST00000615606 FAM227BQ96M60 508 aa10.82□□□□□ -0.68
CLTCL1-208ENST00000615606 ARGLU1Q9NWB6 273 aaPredicted RBP10.82□□□□□ -0.68
CLTCL1-208ENST00000615606 SEMA3EO15041 775 aa10.82□□□□□ -0.68
CLTCL1-208ENST00000615606 RPS6KB1P23443 525 aa10.82□□□□□ -0.68
CLTCL1-208ENST00000615606 GYG1P46976 350 aa10.82□□□□□ -0.68
CLTCL1-208ENST00000615606 CKAP2LQ8IYA6 745 aa10.82□□□□□ -0.68
CLTCL1-208ENST00000615606 ARPP21Q9UBL0 812 aaPredicted RBP10.82□□□□□ -0.68
CLTCL1-208ENST00000615606 FRMPD1Q5SYB0 1578 aa10.81□□□□□ -0.68
CLTCL1-208ENST00000615606 PTPDC1A2A3K4 754 aa10.81□□□□□ -0.68
CLTCL1-208ENST00000615606 CETN1Q12798 172 aa10.81□□□□□ -0.68
CLTCL1-208ENST00000615606 MAPKAPK5Q8IW41 473 aa10.81□□□□□ -0.68
CLTCL1-208ENST00000615606 ZKSCAN3Q9BRR0 538 aa10.81□□□□□ -0.68
CLTCL1-208ENST00000615606 USP40Q9NVE5 1235 aa10.81□□□□□ -0.68
CLTCL1-208ENST00000615606 RMND1Q9NWS8 449 aa10.81□□□□□ -0.68
CLTCL1-208ENST00000615606 EPB41L2O43491 1005 aaKnown RBP10.81□□□□□ -0.68
CLTCL1-208ENST00000615606 LRRC24Q50LG9 513 aa10.81□□□□□ -0.68
CLTCL1-208ENST00000615606 PAF1Q8N7H5 531 aa10.81□□□□□ -0.68
CLTCL1-208ENST00000615606 KCNQ4P56696 695 aa10.81□□□□□ -0.68
CLTCL1-208ENST00000615606 DSCC1Q9BVC3 393 aa10.81□□□□□ -0.68
CLTCL1-208ENST00000615606 GLT8D2Q9H1C3 349 aa10.81□□□□□ -0.68
CLTCL1-208ENST00000615606 ZNF408Q9H9D4 720 aa10.81□□□□□ -0.68
CLTCL1-208ENST00000615606 ATG3Q9NT62 314 aa10.81□□□□□ -0.68
CLTCL1-208ENST00000615606 ANGEL1Q9UNK9 670 aaKnown RBP10.81□□□□□ -0.68
CLTCL1-208ENST00000615606 ADRA2BP18089 450 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 ERFEQ4G0M1 354 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 USP48Q86UV5 1035 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 TGFBRAP1Q8WUH2 860 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 EAF2Q96CJ1 260 aaPredicted RBP10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 INTS4Q96HW7 963 aaKnown RBP10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 SYKP43405 635 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 PPP2R5BQ15173 497 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 VPS72Q15906 364 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 SLC27A3Q5K4L6 730 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 CC2D2BQ6DHV5 1058 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 TRMT1LQ7Z2T5 733 aaKnown RBP10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 PANK2Q9BZ23 570 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 GDPD2Q9HCC8 539 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 PATL2C9JE40 543 aaKnown RBP10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 BRAPQ7Z569 592 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 RUFY1Q96T51 708 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 ZNF521Q96K83 1311 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 LIG1P18858 919 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 BCAMP50895 628 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 STX1AQ16623 288 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 FAM114A1Q8IWE2 563 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 SYCP3Q8IZU3 236 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 ACBD3Q9H3P7 528 aa10.8□□□□□ -0.68
CLTCL1-208ENST00000615606 STAT6P42226 847 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 TCP10Q12799 353 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 FILIP1Q7Z7B0 1213 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 HAUS7Q99871 368 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 EXOC1Q9NV70 894 aa10.79□□□□□ -0.68
CLTCL1-208ENST00000615606 F13A1P00488 732 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms