RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 UBE4AQ14139 1066 aa11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 KRT79Q5XKE5 535 aa11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 CCDC117Q8IWD4 279 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 SMCR8Q8TEV9 937 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 APPBP2Q92624 585 aa11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 PALLDQ8WX93 1383 aa11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 A1BGP04217 495 aa11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 GBP2P32456 591 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 CCDC40Q4G0X9 1142 aa11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 MCF2L2Q86YR7 1114 aa11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 TSHZ2Q9NRE2 1034 aa11.13□□□□□ -0.63
TNFRSF9-204ENST00000615230 CIAO1O76071 339 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 USPL1Q5W0Q7 1092 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 KCNG4Q8TDN1 519 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 IQSEC3Q9UPP2 1182 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 EXOC7Q9UPT5 735 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 ERBB3P21860 1342 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 CEP152O94986 1710 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 CLTCL1P53675 1640 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 MBD4O95243 580 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 IFI16Q16666 785 aaKnown RBP11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 DDX12PQ92771 950 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 DCTPP1Q9H773 170 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 CEP170BQ9Y4F5 1589 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 SDSP20132 328 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 HSP90B2PQ58FF3 399 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 MSL1Q68DK7 614 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 LGR6Q9HBX8 967 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 NMIQ13287 307 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 ZNF496Q96IT1 587 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 ALG1Q9BT22 464 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 DCCP43146 1447 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 IREB2P48200 963 aaKnown RBP11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 SNX16P57768 344 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 HAND2P61296 217 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 ATL3Q6DD88 541 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 PHACTR3Q96KR7 559 aa11.12□□□□□ -0.63
TNFRSF9-204ENST00000615230 RPS6KA4O75676 772 aa11.11□□□□□ -0.63
TNFRSF9-204ENST00000615230 NASPP49321 788 aaPredicted RBP11.11□□□□□ -0.63
TNFRSF9-204ENST00000615230 DNM2P50570 870 aa11.11□□□□□ -0.63
TNFRSF9-204ENST00000615230 AZI2Q9H6S1 392 aa11.11□□□□□ -0.63
TNFRSF9-204ENST00000615230 HAUS3Q68CZ6 603 aa11.11□□□□□ -0.63
TNFRSF9-204ENST00000615230 TTLL6Q8N841 843 aa11.11□□□□□ -0.63
TNFRSF9-204ENST00000615230 ESYT1Q9BSJ8 1104 aa11.11□□□□□ -0.63
TNFRSF9-204ENST00000615230 USP40Q9NVE5 1235 aa11.11□□□□□ -0.63
TNFRSF9-204ENST00000615230 RBM8AQ9Y5S9 174 aaKnown RBP11.11□□□□□ -0.63
TNFRSF9-204ENST00000615230 FAM13AO94988 1023 aa11.11□□□□□ -0.63
TNFRSF9-204ENST00000615230 LIG1P18858 919 aa11.11□□□□□ -0.63
TNFRSF9-204ENST00000615230 KIAA1328Q86T90 577 aa11.11□□□□□ -0.63
TNFRSF9-204ENST00000615230 NOP56O00567 594 aaKnown RBP11.11□□□□□ -0.63
TNFRSF9-204ENST00000615230 GIGYF1O75420 1035 aaPredicted RBP11.11□□□□□ -0.63
TNFRSF9-204ENST00000615230 BACH2Q9BYV9 841 aa11.11□□□□□ -0.63
TNFRSF9-204ENST00000615230 NEURL1BA8MQ27 555 aa11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 SEPT7Q16181 437 aaKnown RBP11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 GNPTABQ3T906 1256 aa11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 STAT6P42226 847 aa11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 ATG3Q9NT62 314 aa11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 RNF216Q9NWF9 866 aaPredicted RBP11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 TRAK2O60296 914 aa11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 CFAP65Q6ZU64 1925 aaKnown RBP11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 TTF2Q9UNY4 1162 aaKnown RBP11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 GOLGA6L10A6NI86 522 aa11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 USO1O60763 962 aaKnown RBP11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 PHACTR2O75167 634 aa11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 YEATS4O95619 227 aa11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 CCT2P78371 535 aaKnown RBP11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 TAF12Q16514 161 aa11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 BRAPQ7Z569 592 aa11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 HELBQ8NG08 1087 aaPredicted RBP11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 CTAGE1Q96RT6 745 aa11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 GPR108Q9NPR9 543 aa11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 PABPN1LA6NDY0 278 aaKnown RBP11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 GJB2P29033 226 aa11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 SSR1P43307 286 aaKnown RBP11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 SMTNP53814 917 aa11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 CCDC183Q5T5S1 534 aa11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 CCDC102BQ68D86 513 aa11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 MIGA1Q8NAN2 632 aa11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 SPON1Q9HCB6 807 aa11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.1□□□□□ -0.63
TNFRSF9-204ENST00000615230 HEG1Q9ULI3 1381 aa11.09□□□□□ -0.63
TNFRSF9-204ENST00000615230 GIGYF2Q6Y7W6 1299 aaKnown RBP11.09□□□□□ -0.63
TNFRSF9-204ENST00000615230 HOOK3Q86VS8 718 aa11.09□□□□□ -0.63
TNFRSF9-204ENST00000615230 IFT74Q96LB3 600 aa11.09□□□□□ -0.63
TNFRSF9-204ENST00000615230 USP19O94966 1318 aa11.09□□□□□ -0.63
TNFRSF9-204ENST00000615230 BACH1O14867 736 aa11.09□□□□□ -0.63
TNFRSF9-204ENST00000615230 SPAG1Q07617 926 aa11.09□□□□□ -0.63
TNFRSF9-204ENST00000615230 SAP30BPQ9UHR5 308 aaKnown RBP11.09□□□□□ -0.63
TNFRSF9-204ENST00000615230 BICDL2A1A5D9 508 aa11.09□□□□□ -0.63
TNFRSF9-204ENST00000615230 IQCA1LA6NCM1 817 aa11.09□□□□□ -0.63
TNFRSF9-204ENST00000615230 KIF2AO00139 706 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF9-204ENST00000615230 LRSAM1Q6UWE0 723 aa11.09□□□□□ -0.63
TNFRSF9-204ENST00000615230 PNMA3Q9UL41 463 aa11.09□□□□□ -0.63
TNFRSF9-204ENST00000615230 MFSD14BQ5SR56 506 aa11.09□□□□□ -0.63
TNFRSF9-204ENST00000615230 TBC1D9Q6ZT07 1266 aa11.09□□□□□ -0.63
TNFRSF9-204ENST00000615230 DHX32Q7L7V1 743 aaKnown RBP11.09□□□□□ -0.63
TNFRSF9-204ENST00000615230 EXOC8Q8IYI6 725 aa11.09□□□□□ -0.63
TNFRSF9-204ENST00000615230 CARMIL3Q8ND23 1372 aa11.08□□□□□ -0.63
TNFRSF9-204ENST00000615230 MTIF2P46199 727 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms