RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 CYP11A1P05108 521 aa9.02□□□□□ -0.97
SCAMP1-205ENST00000614488 GNA15P30679 374 aa9.02□□□□□ -0.97
SCAMP1-205ENST00000614488 FAAP100Q0VG06 881 aa9.02□□□□□ -0.97
SCAMP1-205ENST00000614488 C3orf58Q8NDZ4 430 aa9.02□□□□□ -0.97
SCAMP1-205ENST00000614488 PPM1HQ9ULR3 514 aa9.02□□□□□ -0.97
SCAMP1-205ENST00000614488 GLB1P16278 677 aa9.01□□□□□ -0.97
SCAMP1-205ENST00000614488 AP3B2Q13367 1082 aa9.01□□□□□ -0.97
SCAMP1-205ENST00000614488 RSPO4Q2I0M5 234 aaPredicted RBP9.01□□□□□ -0.97
SCAMP1-205ENST00000614488 UVSSAQ2YD98 709 aa9.01□□□□□ -0.97
SCAMP1-205ENST00000614488 NKAPLQ5M9Q1 402 aa9.01□□□□□ -0.97
SCAMP1-205ENST00000614488 HP1BP3Q5SSJ5 553 aaPredicted RBP9.01□□□□□ -0.97
SCAMP1-205ENST00000614488 TMCO4Q5TGY1 634 aa9.01□□□□□ -0.97
SCAMP1-205ENST00000614488 ANKRD34AQ69YU3 496 aa9.01□□□□□ -0.97
SCAMP1-205ENST00000614488 FBXO33Q7Z6M2 555 aa9.01□□□□□ -0.97
SCAMP1-205ENST00000614488 ANKRD24Q8TF21 1146 aa9.01□□□□□ -0.97
SCAMP1-205ENST00000614488 TP53INP1Q96A56 240 aa9.01□□□□□ -0.97
SCAMP1-205ENST00000614488 TRIM56Q9BRZ2 755 aaKnown RBP9.01□□□□□ -0.97
SCAMP1-205ENST00000614488 FAM8A1Q9UBU6 413 aa9.01□□□□□ -0.97
SCAMP1-205ENST00000614488 H2AFB1P0C5Y9 115 aa9□□□□□ -0.97
SCAMP1-205ENST00000614488 H2AFB2P0C5Z0 115 aa9□□□□□ -0.97
SCAMP1-205ENST00000614488 TMPRSS13Q9BYE2 586 aa9□□□□□ -0.97
SCAMP1-205ENST00000614488 FURINP09958 794 aa8.99□□□□□ -0.97
SCAMP1-205ENST00000614488 PPP2R3AQ06190 1150 aa8.99□□□□□ -0.97
SCAMP1-205ENST00000614488 POU4F3Q15319 338 aa8.99□□□□□ -0.97
SCAMP1-205ENST00000614488 DUSP9Q99956 384 aaKnown RBP8.99□□□□□ -0.97
SCAMP1-205ENST00000614488 SUGCTQ9HAC7 445 aa8.99□□□□□ -0.97
SCAMP1-205ENST00000614488 TMEM39AQ9NV64 488 aa8.99□□□□□ -0.97
SCAMP1-205ENST00000614488 GPN3Q9UHW5 284 aaPredicted RBP8.99□□□□□ -0.97
SCAMP1-205ENST00000614488 AKAP2Q9Y2D5 859 aa8.99□□□□□ -0.97
SCAMP1-205ENST00000614488 K7ELQ4 463 aaPredicted RBP8.98□□□□□ -0.97
SCAMP1-205ENST00000614488 MAOBP27338 520 aa8.98□□□□□ -0.97
SCAMP1-205ENST00000614488 SMG8Q8ND04 991 aaKnown RBP8.98□□□□□ -0.97
SCAMP1-205ENST00000614488 FAM46AQ96IP4 442 aaKnown RBP8.98□□□□□ -0.97
SCAMP1-205ENST00000614488 UBL7Q96S82 380 aaPredicted RBP8.98□□□□□ -0.97
SCAMP1-205ENST00000614488 CORO1BQ9BR76 489 aa8.98□□□□□ -0.97
SCAMP1-205ENST00000614488 DLGAP3O95886 979 aa8.97□□□□□ -0.97
SCAMP1-205ENST00000614488 EIF4BP23588 611 aaKnown RBP8.97□□□□□ -0.97
SCAMP1-205ENST00000614488 EXOSC6Q5RKV6 272 aaKnown RBP8.97□□□□□ -0.97
SCAMP1-205ENST00000614488 NUTM2GQ5VZR2 741 aa8.97□□□□□ -0.97
SCAMP1-205ENST00000614488 FDX2Q6P4F2 183 aa8.97□□□□□ -0.97
SCAMP1-205ENST00000614488 CEP44Q9C0F1 390 aa8.97□□□□□ -0.97
SCAMP1-205ENST00000614488 CYP4F12Q9HCS2 524 aa8.97□□□□□ -0.97
SCAMP1-205ENST00000614488 DYRK3O43781 588 aa8.96□□□□□ -0.98
SCAMP1-205ENST00000614488 ADAM23O75077 832 aa8.96□□□□□ -0.98
SCAMP1-205ENST00000614488 USP17L7P0C7H9 530 aa8.96□□□□□ -0.98
SCAMP1-205ENST00000614488 AK5Q9Y6K8 562 aa8.96□□□□□ -0.98
SCAMP1-205ENST00000614488 TIAF1O95411 115 aa8.95□□□□□ -0.98
SCAMP1-205ENST00000614488 CTSBP07858 339 aa8.95□□□□□ -0.98
SCAMP1-205ENST00000614488 ZNF157P51786 506 aaPredicted RBP8.95□□□□□ -0.98
SCAMP1-205ENST00000614488 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.95□□□□□ -0.98
SCAMP1-205ENST00000614488 NECAB3Q96P71 396 aaPredicted RBP8.95□□□□□ -0.98
SCAMP1-205ENST00000614488 PARP2Q9UGN5 583 aa8.95□□□□□ -0.98
SCAMP1-205ENST00000614488 SART1O43290 800 aaKnown RBP8.94□□□□□ -0.98
SCAMP1-205ENST00000614488 PREPP48147 710 aa8.94□□□□□ -0.98
SCAMP1-205ENST00000614488 DAB2P98082 770 aa8.94□□□□□ -0.98
SCAMP1-205ENST00000614488 HNRNPUQ00839 825 aaKnown RBP eCLIP8.94□□□□□ -0.98
SCAMP1-205ENST00000614488 PRR23CQ6ZRP0 262 aa8.94□□□□□ -0.98
SCAMP1-205ENST00000614488 ARMC10Q8N2F6 343 aa8.94□□□□□ -0.98
SCAMP1-205ENST00000614488 UTP4Q969X6 686 aaKnown RBP8.94□□□□□ -0.98
SCAMP1-205ENST00000614488 HIF3AQ9Y2N7 669 aa8.94□□□□□ -0.98
SCAMP1-205ENST00000614488 SYNGAP1Q96PV0 1343 aa8.94□□□□□ -0.98
SCAMP1-205ENST00000614488 NME2P22392 152 aa8.93□□□□□ -0.98
SCAMP1-205ENST00000614488 TPTE2Q6XPS3 522 aa8.93□□□□□ -0.98
SCAMP1-205ENST00000614488 TMC4Q7Z404 712 aa8.93□□□□□ -0.98
SCAMP1-205ENST00000614488 SULF2Q8IWU5 870 aa8.93□□□□□ -0.98
SCAMP1-205ENST00000614488 MYRFLQ96LU7 910 aa8.93□□□□□ -0.98
SCAMP1-205ENST00000614488 SEMA6BQ9H3T3 888 aa8.93□□□□□ -0.98
SCAMP1-205ENST00000614488 KRT82Q9NSB4 513 aa8.93□□□□□ -0.98
SCAMP1-205ENST00000614488 DHX15O43143 795 aaKnown RBP8.92□□□□□ -0.98
SCAMP1-205ENST00000614488 ECEL1O95672 775 aa8.92□□□□□ -0.98
SCAMP1-205ENST00000614488 GSTP1P09211 210 aaKnown RBP8.92□□□□□ -0.98
SCAMP1-205ENST00000614488 ITGAEP38570 1179 aa8.92□□□□□ -0.98
SCAMP1-205ENST00000614488 MFAP1P55081 439 aaKnown RBP8.92□□□□□ -0.98
SCAMP1-205ENST00000614488 XPCQ01831 940 aaPredicted RBP8.92□□□□□ -0.98
SCAMP1-205ENST00000614488 PSMD2Q13200 908 aa8.92□□□□□ -0.98
SCAMP1-205ENST00000614488 EMILIN2Q9BXX0 1053 aa8.92□□□□□ -0.98
SCAMP1-205ENST00000614488 RNF19AQ9NV58 838 aa8.92□□□□□ -0.98
SCAMP1-205ENST00000614488 SAMM50Q9Y512 469 aa8.92□□□□□ -0.98
SCAMP1-205ENST00000614488 ENC1O14682 589 aa8.91□□□□□ -0.98
SCAMP1-205ENST00000614488 GAS2O43903 313 aaKnown RBP8.91□□□□□ -0.98
SCAMP1-205ENST00000614488 PDE3AQ14432 1141 aa8.91□□□□□ -0.98
SCAMP1-205ENST00000614488 PDZD3Q86UT5 571 aa8.91□□□□□ -0.98
SCAMP1-205ENST00000614488 C12orf50Q8NA57 414 aaPredicted RBP8.91□□□□□ -0.98
SCAMP1-205ENST00000614488 TTF2Q9UNY4 1162 aaKnown RBP8.91□□□□□ -0.98
SCAMP1-205ENST00000614488 RAXQ9Y2V3 346 aa8.91□□□□□ -0.98
SCAMP1-205ENST00000614488 ADH5P11766 374 aa8.9□□□□□ -0.98
SCAMP1-205ENST00000614488 ARNTP27540 789 aa8.9□□□□□ -0.98
SCAMP1-205ENST00000614488 SOX4Q06945 474 aaPredicted RBP8.9□□□□□ -0.98
SCAMP1-205ENST00000614488 TRIM26Q12899 539 aaPredicted RBP8.9□□□□□ -0.98
SCAMP1-205ENST00000614488 SV2BQ7L1I2 683 aa8.9□□□□□ -0.98
SCAMP1-205ENST00000614488 FAM20CQ8IXL6 584 aa8.9□□□□□ -0.98
SCAMP1-205ENST00000614488 BCL2L13Q9BXK5 485 aa8.9□□□□□ -0.98
SCAMP1-205ENST00000614488 FBXO24O75426 580 aa8.89□□□□□ -0.99
SCAMP1-205ENST00000614488 TAGLNQ01995 201 aaKnown RBP8.89□□□□□ -0.99
SCAMP1-205ENST00000614488 WDR18Q9BV38 432 aa8.89□□□□□ -0.99
SCAMP1-205ENST00000614488 CCDC86Q9H6F5 360 aaKnown RBP8.89□□□□□ -0.99
SCAMP1-205ENST00000614488 RAD18Q9NS91 495 aa8.89□□□□□ -0.99
SCAMP1-205ENST00000614488 AOC2O75106 756 aa8.88□□□□□ -0.99
SCAMP1-205ENST00000614488 ITGB7P26010 798 aa8.88□□□□□ -0.99
SCAMP1-205ENST00000614488 ZNF252P-AS1Q0IIN9 211 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms