RNA–Protein interactions for RNA: ENST00000614259.1

BRCA2-207, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 2

Gene BRCA2, Length 7,950 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-207ENST00000614259 ULK1O75385 1050 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 F11P03951 625 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 SMCPP49901 116 aaPredicted RBP2.06□□□□□ -2.08
BRCA2-207ENST00000614259 GUCA2AQ02747 115 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 RCC1LQ96I51 464 aaKnown RBP2.06□□□□□ -2.08
BRCA2-207ENST00000614259 SETDB2Q96T68 719 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 PHACTR1Q9C0D0 580 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 CABP1Q9NZU7 370 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 GIT1Q9Y2X7 761 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 CCDC196A0A1B0GTZ2 297 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 SMAPO00193 183 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 CPP00450 1065 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 DNAJA1P31689 397 aaKnown RBP2.06□□□□□ -2.08
BRCA2-207ENST00000614259 NASPP49321 788 aaPredicted RBP2.06□□□□□ -2.08
BRCA2-207ENST00000614259 APOBRQ0VD83 1088 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 BIRC2Q13490 618 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 RASA3Q14644 834 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 RALBP1Q15311 655 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 C4orf46Q504U0 113 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 DDX46Q7L014 1031 aaKnown RBP2.06□□□□□ -2.08
BRCA2-207ENST00000614259 SHDQ96IW2 340 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 LSM14BQ9BX40 385 aaKnown RBP2.06□□□□□ -2.08
BRCA2-207ENST00000614259 JAG2Q9Y219 1238 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 USP20Q9Y2K6 914 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 RTCBQ9Y3I0 505 aaKnown RBP2.06□□□□□ -2.08
BRCA2-207ENST00000614259 UBAP1LF5GYI3 381 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 ITGA6P23229 1130 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 GJA9P57773 515 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 RAPGEF1Q13905 1077 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 NFE2Q16621 373 aaPredicted RBP2.06□□□□□ -2.08
BRCA2-207ENST00000614259 SMAP1Q8IYB5 467 aaPredicted RBP2.06□□□□□ -2.08
BRCA2-207ENST00000614259 RUNDC1Q96C34 613 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 TSPAN10Q9H1Z9 355 aaPredicted RBP2.06□□□□□ -2.08
BRCA2-207ENST00000614259 EFR3BQ9Y2G0 817 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 RAB11FIP3O75154 756 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 GBP2P32456 591 aaPredicted RBP2.06□□□□□ -2.08
BRCA2-207ENST00000614259 LIG3P49916 1009 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 MAP4K2Q12851 820 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 TMEM95Q3KNT9 176 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 SLC6A19Q695T7 634 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 NUDT16Q96DE0 195 aaKnown RBP2.06□□□□□ -2.08
BRCA2-207ENST00000614259 ACBD3Q9H3P7 528 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 CASS4Q9NQ75 786 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 APOBEC2Q9Y235 224 aaKnown RBP2.06□□□□□ -2.08
BRCA2-207ENST00000614259 BPNT1O95861 308 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 CES1P23141 567 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 PDCD2Q16342 344 aaPredicted RBP2.06□□□□□ -2.08
BRCA2-207ENST00000614259 GFOD2Q3B7J2 385 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 SNAP47Q5SQN1 464 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 PERM1Q5SV97 790 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 TMEM214Q6NUQ4 689 aaKnown RBP2.06□□□□□ -2.08
BRCA2-207ENST00000614259 CCDC34Q96HJ3 373 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 SUSD3Q96L08 255 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 PRDM6Q9NQX0 595 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 SNTG2Q9NY99 539 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 MEGF11A6BM72 1044 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 FAM153BP0C7A2 387 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 TYRP1P17643 537 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 CABP4P57796 275 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 TCEAL8Q8IYN2 117 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 ZNF428Q96B54 188 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 GBP3Q9H0R5 595 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 CNTN3Q9P232 1028 aa2.06□□□□□ -2.08
BRCA2-207ENST00000614259 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.06□□□□□ -2.08
BRCA2-207ENST00000614259 C3orf80F5H4A9 247 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 CFBP00751 764 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 ASLP04424 464 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 CALRP27797 417 aaKnown RBP2.05□□□□□ -2.08
BRCA2-207ENST00000614259 CLNS1AP54105 237 aaKnown RBP2.05□□□□□ -2.08
BRCA2-207ENST00000614259 ADCY1Q08828 1119 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 FAM117BQ6P1L5 589 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 TSHZ1Q6ZSZ6 1077 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 DDX1Q92499 740 aaKnown RBP2.05□□□□□ -2.08
BRCA2-207ENST00000614259 DHX38Q92620 1227 aaKnown RBP2.05□□□□□ -2.08
BRCA2-207ENST00000614259 FOXJ1Q92949 421 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 HERPUD2Q9BSE4 406 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.05□□□□□ -2.08
BRCA2-207ENST00000614259 TRAV20A0A0B4J274 112 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 GADD45BO75293 160 aaPredicted RBP2.05□□□□□ -2.08
BRCA2-207ENST00000614259 RACK1P63244 317 aaKnown RBP2.05□□□□□ -2.08
BRCA2-207ENST00000614259 GPLD1P80108 840 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 GRB10Q13322 594 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 BTLAQ7Z6A9 289 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 EHBP1Q8NDI1 1231 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 C3orf58Q8NDZ4 430 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 SRPK1Q96SB4 655 aaKnown RBP2.05□□□□□ -2.08
BRCA2-207ENST00000614259 ADGRE2Q9UHX3 823 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 RNF112Q9ULX5 631 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 ST18O60284 1047 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 HSD3B1P14060 373 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 TBX2Q13207 712 aaPredicted RBP2.05□□□□□ -2.08
BRCA2-207ENST00000614259 SVIPQ8NHG7 77 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 STAT3P40763 770 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 DNM1Q05193 864 aaKnown RBP2.05□□□□□ -2.08
BRCA2-207ENST00000614259 CBLBQ13191 982 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 LAPTM4AQ15012 233 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 DDR2Q16832 855 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 KIFC2Q96AC6 838 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 RCAN3Q9UKA8 241 aa2.05□□□□□ -2.08
BRCA2-207ENST00000614259 PADI4Q9UM07 663 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms