RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 IGSF3O75054 1194 aa16.53■□□□□ 0.24
TMEM254-213ENST00000613758 IARSP41252 1262 aaKnown RBP16.53■□□□□ 0.24
TMEM254-213ENST00000613758 GRIK5Q16478 980 aa16.53■□□□□ 0.24
TMEM254-213ENST00000613758 NAA16Q6N069 864 aaPredicted RBP16.53■□□□□ 0.24
TMEM254-213ENST00000613758 CHD4Q14839 1912 aa16.53■□□□□ 0.24
TMEM254-213ENST00000613758 PTH1RQ03431 593 aa16.53■□□□□ 0.24
TMEM254-213ENST00000613758 DZIP1Q86YF9 867 aaKnown RBP16.53■□□□□ 0.24
TMEM254-213ENST00000613758 ZNF384Q8TF68 577 aa16.53■□□□□ 0.24
TMEM254-213ENST00000613758 MYH7P12883 1935 aa16.52■□□□□ 0.24
TMEM254-213ENST00000613758 EPB41L2O43491 1005 aaKnown RBP16.52■□□□□ 0.24
TMEM254-213ENST00000613758 LTBP3Q9NS15 1303 aa16.52■□□□□ 0.23
TMEM254-213ENST00000613758 USP17L3A6NCW0 530 aa16.51■□□□□ 0.23
TMEM254-213ENST00000613758 USP17L4A6NCW7 530 aa16.51■□□□□ 0.23
TMEM254-213ENST00000613758 STRIP1Q5VSL9 837 aa16.51■□□□□ 0.23
TMEM254-213ENST00000613758 TMED8Q6PL24 325 aaPredicted RBP16.51■□□□□ 0.23
TMEM254-213ENST00000613758 USP17L1Q7RTZ2 530 aa16.51■□□□□ 0.23
TMEM254-213ENST00000613758 FER1L6Q2WGJ9 1857 aa16.51■□□□□ 0.23
TMEM254-213ENST00000613758 YDJCA8MPS7 323 aa16.51■□□□□ 0.23
TMEM254-213ENST00000613758 GPAA1O43292 621 aa16.51■□□□□ 0.23
TMEM254-213ENST00000613758 SLC4A3P48751 1232 aa16.51■□□□□ 0.23
TMEM254-213ENST00000613758 ADGRA1Q86SQ6 560 aa16.51■□□□□ 0.23
TMEM254-213ENST00000613758 NIM1KQ8IY84 436 aa16.51■□□□□ 0.23
TMEM254-213ENST00000613758 KIF2CQ99661 725 aa16.51■□□□□ 0.23
TMEM254-213ENST00000613758 MXD3Q9BW11 206 aa16.51■□□□□ 0.23
TMEM254-213ENST00000613758 GSTO1P78417 241 aa16.5■□□□□ 0.23
TMEM254-213ENST00000613758 CERS5Q8N5B7 392 aa16.5■□□□□ 0.23
TMEM254-213ENST00000613758 MAP4K1Q92918 833 aa16.5■□□□□ 0.23
TMEM254-213ENST00000613758 AIDAQ96BJ3 306 aa16.5■□□□□ 0.23
TMEM254-213ENST00000613758 SUGT1Q9Y2Z0 365 aa16.5■□□□□ 0.23
TMEM254-213ENST00000613758 ARFGEF1Q9Y6D6 1849 aa16.5■□□□□ 0.23
TMEM254-213ENST00000613758 RASSF7Q02833 373 aa16.5■□□□□ 0.23
TMEM254-213ENST00000613758 DACT2Q5SW24 774 aa16.5■□□□□ 0.23
TMEM254-213ENST00000613758 ARHGAP27Q6ZUM4 889 aa16.5■□□□□ 0.23
TMEM254-213ENST00000613758 MIGA1Q8NAN2 632 aa16.5■□□□□ 0.23
TMEM254-213ENST00000613758 ZNRF3Q9ULT6 936 aa16.5■□□□□ 0.23
TMEM254-213ENST00000613758 MBD4O95243 580 aa16.49■□□□□ 0.23
TMEM254-213ENST00000613758 MCCP23508 829 aa16.49■□□□□ 0.23
TMEM254-213ENST00000613758 FKBP1AP62942 108 aaKnown RBP16.49■□□□□ 0.23
TMEM254-213ENST00000613758 VPS53Q5VIR6 699 aa16.49■□□□□ 0.23
TMEM254-213ENST00000613758 STRBPQ96SI9 672 aaKnown RBP16.49■□□□□ 0.23
TMEM254-213ENST00000613758 MAGEB6P1A0A0J9YX57 407 aa16.48■□□□□ 0.23
TMEM254-213ENST00000613758 LDHCP07864 332 aa16.48■□□□□ 0.23
TMEM254-213ENST00000613758 HSPD1P10809 573 aaKnown RBP16.48■□□□□ 0.23
TMEM254-213ENST00000613758 JDP2Q8WYK2 163 aa16.48■□□□□ 0.23
TMEM254-213ENST00000613758 ARMT1Q9H993 441 aa16.48■□□□□ 0.23
TMEM254-213ENST00000613758 COL4A5P29400 1685 aa16.48■□□□□ 0.23
TMEM254-213ENST00000613758 DIXDC1Q155Q3 683 aa16.48■□□□□ 0.23
TMEM254-213ENST00000613758 DSCC1Q9BVC3 393 aa16.48■□□□□ 0.23
TMEM254-213ENST00000613758 RBM8AQ9Y5S9 174 aaKnown RBP16.48■□□□□ 0.23
TMEM254-213ENST00000613758 HSPA4P34932 840 aa16.47■□□□□ 0.23
TMEM254-213ENST00000613758 SLF2Q8IX21 1173 aa16.47■□□□□ 0.23
TMEM254-213ENST00000613758 LCORLQ8N3X6 602 aa16.47■□□□□ 0.23
TMEM254-213ENST00000613758 F8W031 263 aaPredicted RBP16.47■□□□□ 0.23
TMEM254-213ENST00000613758 RAD17O75943 681 aa16.47■□□□□ 0.23
TMEM254-213ENST00000613758 PRELPP51888 382 aa16.47■□□□□ 0.23
TMEM254-213ENST00000613758 DYNLL1P63167 89 aaKnown RBP16.47■□□□□ 0.23
TMEM254-213ENST00000613758 RIOK1Q9BRS2 568 aaKnown RBP16.47■□□□□ 0.23
TMEM254-213ENST00000613758 TTF2Q9UNY4 1162 aaKnown RBP16.47■□□□□ 0.23
TMEM254-213ENST00000613758 U3KPZ7 1027 aaPredicted RBP16.47■□□□□ 0.23
TMEM254-213ENST00000613758 SCN9AQ15858 1988 aa16.47■□□□□ 0.23
TMEM254-213ENST00000613758 YBX3P16989 372 aaKnown RBP eCLIP16.46■□□□□ 0.23
TMEM254-213ENST00000613758 NECTIN1Q15223 517 aa16.46■□□□□ 0.23
TMEM254-213ENST00000613758 CCDC88AQ3V6T2 1871 aa16.46■□□□□ 0.23
TMEM254-213ENST00000613758 PSMD14O00487 310 aa16.45■□□□□ 0.22
TMEM254-213ENST00000613758 FOXP2O15409 715 aa16.45■□□□□ 0.22
TMEM254-213ENST00000613758 VIL1P09327 827 aaKnown RBP16.45■□□□□ 0.22
TMEM254-213ENST00000613758 GNAT2P19087 354 aa16.45■□□□□ 0.22
TMEM254-213ENST00000613758 FAM163AQ96GL9 167 aaPredicted RBP16.45■□□□□ 0.22
TMEM254-213ENST00000613758 TBC1D2Q9BYX2 928 aa16.45■□□□□ 0.22
TMEM254-213ENST00000613758 AATFQ9NY61 560 aaKnown RBP eCLIP16.45■□□□□ 0.22
TMEM254-213ENST00000613758 MROH7-TTC4A0A0A0MT08 1334 aa16.45■□□□□ 0.22
TMEM254-213ENST00000613758 PATL2C9JE40 543 aaKnown RBP16.45■□□□□ 0.22
TMEM254-213ENST00000613758 APPP05067 770 aa16.45■□□□□ 0.22
TMEM254-213ENST00000613758 PALD1Q9ULE6 856 aa16.45■□□□□ 0.22
TMEM254-213ENST00000613758 MAST2Q6P0Q8 1798 aa16.45■□□□□ 0.22
TMEM254-213ENST00000613758 PRKAB2O43741 272 aa16.44■□□□□ 0.22
TMEM254-213ENST00000613758 CXCL9Q07325 125 aa16.44■□□□□ 0.22
TMEM254-213ENST00000613758 CREB3L3Q68CJ9 461 aa16.44■□□□□ 0.22
TMEM254-213ENST00000613758 RSBN1LQ6PCB5 846 aaPredicted RBP16.44■□□□□ 0.22
TMEM254-213ENST00000613758 KIAA0825Q8IV33 1275 aa16.44■□□□□ 0.22
TMEM254-213ENST00000613758 NOL10Q9BSC4 688 aaKnown RBP16.44■□□□□ 0.22
TMEM254-213ENST00000613758 SLC4A4Q9Y6R1 1079 aa16.44■□□□□ 0.22
TMEM254-213ENST00000613758 BAG3O95817 575 aa16.44■□□□□ 0.22
TMEM254-213ENST00000613758 SCNN1DP51172 638 aa16.44■□□□□ 0.22
TMEM254-213ENST00000613758 GPR75-ASB3A0A0A6YYF3 556 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 SLC27A2O14975 620 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 FGAP02671 866 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 LMNB1P20700 586 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 ANAPC15P60006 121 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 PPP4CP60510 307 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 BECN1Q14457 450 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 CIAPIN1Q6FI81 312 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 KCNB2Q92953 911 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 MRIQ9BWK5 157 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 CTNNA3Q9UI47 895 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 GAKO14976 1311 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 MYO3BQ8WXR4 1341 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 GSG1L2A8MUP6 293 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 BTDP43251 543 aa16.43■□□□□ 0.22
TMEM254-213ENST00000613758 RNF20Q5VTR2 975 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms