RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 R3HDMLQ9H3Y0 253 aa18.49■□□□□ 0.55
FDPS-221ENST00000612683 FKTNO75072 461 aa18.48■□□□□ 0.55
FDPS-221ENST00000612683 IFIT1P09914 478 aaKnown RBP18.48■□□□□ 0.55
FDPS-221ENST00000612683 ZBTB48P10074 688 aaPredicted RBP18.48■□□□□ 0.55
FDPS-221ENST00000612683 TNNI2P48788 182 aa18.48■□□□□ 0.55
FDPS-221ENST00000612683 SOX10P56693 466 aa18.48■□□□□ 0.55
FDPS-221ENST00000612683 NOM1Q5C9Z4 860 aaKnown RBP18.48■□□□□ 0.55
FDPS-221ENST00000612683 IFNL1Q8IU54 200 aa18.48■□□□□ 0.55
FDPS-221ENST00000612683 ANKRD13AQ8IZ07 590 aa18.48■□□□□ 0.55
FDPS-221ENST00000612683 SSC5DA1L4H1 1573 aa18.47■□□□□ 0.55
FDPS-221ENST00000612683 TRMT2AQ8IZ69 625 aaKnown RBP18.47■□□□□ 0.55
FDPS-221ENST00000612683 CFHR5Q9BXR6 569 aa18.47■□□□□ 0.55
FDPS-221ENST00000612683 HPS5Q9UPZ3 1129 aa18.47■□□□□ 0.55
FDPS-221ENST00000612683 EYA2O00167 538 aa18.46■□□□□ 0.55
FDPS-221ENST00000612683 HDLBPQ00341 1268 aaKnown RBP18.46■□□□□ 0.55
FDPS-221ENST00000612683 PUM3Q15397 648 aaKnown RBP18.46■□□□□ 0.55
FDPS-221ENST00000612683 TEKT1Q969V4 418 aa18.46■□□□□ 0.55
FDPS-221ENST00000612683 NOB1Q9ULX3 412 aaKnown RBP18.46■□□□□ 0.55
FDPS-221ENST00000612683 UBTFL1P0CB47 393 aaPredicted RBP18.45■□□□□ 0.54
FDPS-221ENST00000612683 SLC5A1P13866 664 aa18.45■□□□□ 0.54
FDPS-221ENST00000612683 FGFR2P21802 821 aa18.45■□□□□ 0.54
FDPS-221ENST00000612683 RFX5P48382 616 aaPredicted RBP18.45■□□□□ 0.54
FDPS-221ENST00000612683 OTUD7BQ6GQQ9 843 aa18.45■□□□□ 0.54
FDPS-221ENST00000612683 TMEM39BQ9GZU3 492 aa18.45■□□□□ 0.54
FDPS-221ENST00000612683 GJA5P36382 358 aa18.44■□□□□ 0.54
FDPS-221ENST00000612683 CDAN1Q8IWY9 1227 aa18.44■□□□□ 0.54
FDPS-221ENST00000612683 TEPSINQ96N21 525 aa18.44■□□□□ 0.54
FDPS-221ENST00000612683 MRIQ9BWK5 157 aa18.44■□□□□ 0.54
FDPS-221ENST00000612683 ELP3Q9H9T3 547 aa18.44■□□□□ 0.54
FDPS-221ENST00000612683 IGF2BP3O00425 579 aaKnown RBP eCLIP18.43■□□□□ 0.54
FDPS-221ENST00000612683 CT47B1P0C2W7 299 aaPredicted RBP18.43■□□□□ 0.54
FDPS-221ENST00000612683 CACNB3P54284 484 aa18.43■□□□□ 0.54
FDPS-221ENST00000612683 LPIN2Q92539 896 aa18.43■□□□□ 0.54
FDPS-221ENST00000612683 SIL1Q9H173 461 aa18.43■□□□□ 0.54
FDPS-221ENST00000612683 TMOD2Q9NZR1 351 aa18.43■□□□□ 0.54
FDPS-221ENST00000612683 MAP3K9P80192 1104 aa18.42■□□□□ 0.54
FDPS-221ENST00000612683 FBXO46Q6PJ61 603 aaPredicted RBP18.42■□□□□ 0.54
FDPS-221ENST00000612683 ATG9AQ7Z3C6 839 aa18.42■□□□□ 0.54
FDPS-221ENST00000612683 OPTNQ96CV9 577 aa18.42■□□□□ 0.54
FDPS-221ENST00000612683 ZDHHC15Q96MV8 337 aa18.42■□□□□ 0.54
FDPS-221ENST00000612683 API5Q9BZZ5 524 aaKnown RBP18.42■□□□□ 0.54
FDPS-221ENST00000612683 CEP126Q9P2H0 1117 aa18.42■□□□□ 0.54
FDPS-221ENST00000612683 HDAC5Q9UQL6 1122 aa18.42■□□□□ 0.54
FDPS-221ENST00000612683 SUGT1Q9Y2Z0 365 aa18.42■□□□□ 0.54
FDPS-221ENST00000612683 MAST3O60307 1309 aa18.42■□□□□ 0.54
FDPS-221ENST00000612683 KIF16BQ96L93 1317 aa18.42■□□□□ 0.54
FDPS-221ENST00000612683 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.41■□□□□ 0.54
FDPS-221ENST00000612683 WDR66Q8TBY9 1149 aa18.41■□□□□ 0.54
FDPS-221ENST00000612683 CCER2I3L3R5 266 aa18.4■□□□□ 0.54
FDPS-221ENST00000612683 APOBEC3HQ6NTF7 200 aaKnown RBP18.4■□□□□ 0.54
FDPS-221ENST00000612683 PTPN18Q99952 460 aa18.4■□□□□ 0.54
FDPS-221ENST00000612683 FBXO3Q9UK99 471 aa18.4■□□□□ 0.54
FDPS-221ENST00000612683 CSADQ9Y600 493 aa18.4■□□□□ 0.54
FDPS-221ENST00000612683 LRRFIP2Q9Y608 721 aaKnown RBP18.4■□□□□ 0.54
FDPS-221ENST00000612683 TESPA1A2RU30 521 aaPredicted RBP18.39■□□□□ 0.53
FDPS-221ENST00000612683 ATP2B3Q16720 1220 aa18.39■□□□□ 0.53
FDPS-221ENST00000612683 HHIPL2Q6UWX4 724 aa18.39■□□□□ 0.53
FDPS-221ENST00000612683 CNKSR2Q8WXI2 1034 aa18.39■□□□□ 0.53
FDPS-221ENST00000612683 GNL3LQ9NVN8 582 aaKnown RBP18.39■□□□□ 0.53
FDPS-221ENST00000612683 TRIM17Q9Y577 477 aa18.39■□□□□ 0.53
FDPS-221ENST00000612683 ARAP2Q8WZ64 1704 aa18.38■□□□□ 0.53
FDPS-221ENST00000612683 CIAO1O76071 339 aa18.38■□□□□ 0.53
FDPS-221ENST00000612683 CRHR2Q13324 411 aa18.38■□□□□ 0.53
FDPS-221ENST00000612683 VGLL4Q14135 290 aa18.38■□□□□ 0.53
FDPS-221ENST00000612683 FKBP1CQ5VVH2 108 aa18.38■□□□□ 0.53
FDPS-221ENST00000612683 FAM83AQ86UY5 434 aa18.38■□□□□ 0.53
FDPS-221ENST00000612683 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.38■□□□□ 0.532e-21■□□□□ 10
FDPS-221ENST00000612683 MS4A4AQ96JQ5 239 aa18.38■□□□□ 0.53
FDPS-221ENST00000612683 PA2G4Q9UQ80 394 aaKnown RBP18.38■□□□□ 0.53
FDPS-221ENST00000612683 GTF2A2P52657 109 aa18.37■□□□□ 0.53
FDPS-221ENST00000612683 RARSP54136 660 aaKnown RBP18.37■□□□□ 0.53
FDPS-221ENST00000612683 HOOK2Q96ED9 719 aa18.37■□□□□ 0.53
FDPS-221ENST00000612683 OTUD5Q96G74 571 aa18.37■□□□□ 0.53
FDPS-221ENST00000612683 ERO1AQ96HE7 468 aa18.37■□□□□ 0.53
FDPS-221ENST00000612683 CCL15-CCL14A0A0B4J2E2 113 aa18.36■□□□□ 0.53
FDPS-221ENST00000612683 IL15P40933 162 aaPredicted RBP18.36■□□□□ 0.53
FDPS-221ENST00000612683 CCL15Q16663 113 aa18.36■□□□□ 0.53
FDPS-221ENST00000612683 OTOP1Q7RTM1 612 aa18.36■□□□□ 0.53
FDPS-221ENST00000612683 CD99L2Q8TCZ2 262 aa18.36■□□□□ 0.53
FDPS-221ENST00000612683 MEIS3Q99687 375 aa18.36■□□□□ 0.53
FDPS-221ENST00000612683 LDHBP07195 334 aaKnown RBP18.35■□□□□ 0.53
FDPS-221ENST00000612683 SP3Q02447 781 aa18.35■□□□□ 0.53
FDPS-221ENST00000612683 DCAF15Q66K64 600 aa18.35■□□□□ 0.53
FDPS-221ENST00000612683 MIGA2Q7L4E1 593 aa18.35■□□□□ 0.53
FDPS-221ENST00000612683 BRI3BPQ8WY22 251 aa18.35■□□□□ 0.53
FDPS-221ENST00000612683 ZKSCAN4Q969J2 545 aaPredicted RBP18.35■□□□□ 0.53
FDPS-221ENST00000612683 WRNIP1Q96S55 665 aa18.35■□□□□ 0.53
FDPS-221ENST00000612683 DENND2AQ9ULE3 1009 aa18.35■□□□□ 0.53
FDPS-221ENST00000612683 PRDX5P30044 214 aa18.34■□□□□ 0.53
FDPS-221ENST00000612683 PHKA1P46020 1223 aa18.34■□□□□ 0.53
FDPS-221ENST00000612683 TCP10Q12799 353 aa18.34■□□□□ 0.53
FDPS-221ENST00000612683 TAF1CQ15572 869 aaPredicted RBP18.34■□□□□ 0.53
FDPS-221ENST00000612683 DIXDC1Q155Q3 683 aa18.34■□□□□ 0.53
FDPS-221ENST00000612683 ERO1BQ86YB8 467 aa18.34■□□□□ 0.53
FDPS-221ENST00000612683 FAM151AQ8WW52 585 aa18.34■□□□□ 0.53
FDPS-221ENST00000612683 ARHGAP45Q92619 1136 aa18.34■□□□□ 0.53
FDPS-221ENST00000612683 ZFYVE28Q9HCC9 887 aa18.34■□□□□ 0.53
FDPS-221ENST00000612683 COPRSQ9NQ92 184 aa18.34■□□□□ 0.53
FDPS-221ENST00000612683 DAGLAQ9Y4D2 1042 aa18.34■□□□□ 0.53
FDPS-221ENST00000612683 OTOFQ9HC10 1997 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms