RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 KAZALD1Q96I82 304 aa15.01□□□□□ -0.01
FDPS-220ENST00000611010 TMEM39BQ9GZU3 492 aa15.01□□□□□ -0.01
FDPS-220ENST00000611010 TDRD3Q9H7E2 651 aaKnown RBP15.01□□□□□ -0.01
FDPS-220ENST00000611010 EFCC1Q9HA90 598 aa15.01□□□□□ -0.01
FDPS-220ENST00000611010 CHMP3Q9Y3E7 222 aa15.01□□□□□ -0.01
FDPS-220ENST00000611010 PTCH2Q9Y6C5 1203 aa15.01□□□□□ -0.01
FDPS-220ENST00000611010 RANBP2P49792 3224 aaKnown RBP15□□□□□ -0.01
FDPS-220ENST00000611010 MGAMO43451 1857 aa15□□□□□ -0.01
FDPS-220ENST00000611010 MYO1BO43795 1136 aa15□□□□□ -0.01
FDPS-220ENST00000611010 GYG1P46976 350 aa15□□□□□ -0.01
FDPS-220ENST00000611010 MFSD14BQ5SR56 506 aa15□□□□□ -0.01
FDPS-220ENST00000611010 FAM43AQ8N2R8 423 aa15□□□□□ -0.01
FDPS-220ENST00000611010 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15□□□□□ -0.012e-21■□□□□ 10
FDPS-220ENST00000611010 PUS3Q9BZE2 481 aaKnown RBP15□□□□□ -0.01
FDPS-220ENST00000611010 SPINK5Q9NQ38 1064 aaPredicted RBP15□□□□□ -0.01
FDPS-220ENST00000611010 TRIOBPQ9H2D6 2365 aa14.99□□□□□ -0.01
FDPS-220ENST00000611010 PLIN1O60240 522 aa14.99□□□□□ -0.01
FDPS-220ENST00000611010 RBM5P52756 815 aaKnown RBP eCLIP14.99□□□□□ -0.01
FDPS-220ENST00000611010 FAM84BQ96KN1 310 aaPredicted RBP14.99□□□□□ -0.01
FDPS-220ENST00000611010 ARHGAP39Q9C0H5 1083 aa14.99□□□□□ -0.01
FDPS-220ENST00000611010 TTF2Q9UNY4 1162 aaKnown RBP14.99□□□□□ -0.01
FDPS-220ENST00000611010 PTPRFP10586 1907 aa14.98□□□□□ -0.01
FDPS-220ENST00000611010 TCP10L2B9ZVM9 353 aa14.98□□□□□ -0.01
FDPS-220ENST00000611010 CACNB3P54284 484 aa14.98□□□□□ -0.01
FDPS-220ENST00000611010 EXOSC9Q06265 439 aaKnown RBP14.98□□□□□ -0.01
FDPS-220ENST00000611010 LDHAL6AQ6ZMR3 332 aa14.98□□□□□ -0.01
FDPS-220ENST00000611010 DZIP1LQ8IYY4 767 aaKnown RBP14.98□□□□□ -0.01
FDPS-220ENST00000611010 SERPINA10Q9UK55 444 aa14.98□□□□□ -0.01
FDPS-220ENST00000611010 SNCAIPQ9Y6H5 919 aa14.98□□□□□ -0.01
FDPS-220ENST00000611010 DOCK2Q92608 1830 aa14.98□□□□□ -0.01
FDPS-220ENST00000611010 CCL15-CCL14A0A0B4J2E2 113 aa14.97□□□□□ -0.01
FDPS-220ENST00000611010 GRM8O00222 908 aa14.97□□□□□ -0.01
FDPS-220ENST00000611010 CRKP46108 304 aa14.97□□□□□ -0.01
FDPS-220ENST00000611010 TAF1CQ15572 869 aaPredicted RBP14.97□□□□□ -0.01
FDPS-220ENST00000611010 CCL15Q16663 113 aa14.97□□□□□ -0.01
FDPS-220ENST00000611010 OTUD5Q96G74 571 aa14.97□□□□□ -0.01
FDPS-220ENST00000611010 SUCLG2Q96I99 432 aa14.97□□□□□ -0.01
FDPS-220ENST00000611010 CTGFP29279 349 aa14.96□□□□□ -0.01
FDPS-220ENST00000611010 TNFAIP1Q13829 316 aa14.96□□□□□ -0.01
FDPS-220ENST00000611010 OTUD7BQ6GQQ9 843 aa14.96□□□□□ -0.01
FDPS-220ENST00000611010 CNNM1Q9NRU3 951 aa14.96□□□□□ -0.01
FDPS-220ENST00000611010 IQSEC3Q9UPP2 1182 aaPredicted RBP14.96□□□□□ -0.01
FDPS-220ENST00000611010 ALPK3Q96L96 1907 aa14.96□□□□□ -0.02
FDPS-220ENST00000611010 PHIPQ8WWQ0 1821 aa14.95□□□□□ -0.02
FDPS-220ENST00000611010 SPDYE5A6NIY4 337 aa14.95□□□□□ -0.02
FDPS-220ENST00000611010 UBE4AQ14139 1066 aa14.95□□□□□ -0.02
FDPS-220ENST00000611010 CCDC57Q2TAC2 916 aa14.95□□□□□ -0.02
FDPS-220ENST00000611010 VGLL2Q8N8G2 317 aa14.95□□□□□ -0.02
FDPS-220ENST00000611010 SH3TC2Q8TF17 1288 aa14.95□□□□□ -0.02
FDPS-220ENST00000611010 SHISA4Q96DD7 197 aa14.95□□□□□ -0.02
FDPS-220ENST00000611010 COLQQ9Y215 455 aaPredicted RBP14.95□□□□□ -0.02
FDPS-220ENST00000611010 HIBADHP31937 336 aaKnown RBP14.94□□□□□ -0.02
FDPS-220ENST00000611010 MAP3K9P80192 1104 aa14.94□□□□□ -0.02
FDPS-220ENST00000611010 SLC9C1Q4G0N8 1177 aa14.94□□□□□ -0.02
FDPS-220ENST00000611010 NCBP3Q53F19 620 aaKnown RBP14.94□□□□□ -0.02
FDPS-220ENST00000611010 RIPOR2Q9Y4F9 1068 aa14.94□□□□□ -0.02
FDPS-220ENST00000611010 GTF3C3Q9Y5Q9 886 aa14.94□□□□□ -0.02
FDPS-220ENST00000611010 ADGRA2Q96PE1 1338 aa14.93□□□□□ -0.02
FDPS-220ENST00000611010 BTBD19C9JJ37 291 aa14.93□□□□□ -0.02
FDPS-220ENST00000611010 MYCP01106 439 aaPredicted RBP14.93□□□□□ -0.02
FDPS-220ENST00000611010 NBPF7P0C2Y1 421 aaPredicted RBP14.93□□□□□ -0.02
FDPS-220ENST00000611010 GTF2A2P52657 109 aa14.93□□□□□ -0.02
FDPS-220ENST00000611010 LRRC24Q50LG9 513 aa14.93□□□□□ -0.02
FDPS-220ENST00000611010 TAF7LQ5H9L4 462 aa14.93□□□□□ -0.02
FDPS-220ENST00000611010 FBXO33Q7Z6M2 555 aa14.93□□□□□ -0.02
FDPS-220ENST00000611010 ZKSCAN4Q969J2 545 aaPredicted RBP14.93□□□□□ -0.02
FDPS-220ENST00000611010 ZFYVE28Q9HCC9 887 aa14.93□□□□□ -0.02
FDPS-220ENST00000611010 AK9Q5TCS8 1911 aa14.93□□□□□ -0.02
FDPS-220ENST00000611010 RPAP1Q9BWH6 1393 aaPredicted RBP14.93□□□□□ -0.02
FDPS-220ENST00000611010 IRF6O14896 467 aa14.92□□□□□ -0.02
FDPS-220ENST00000611010 TLR2O60603 784 aa14.92□□□□□ -0.02
FDPS-220ENST00000611010 LACTBP83111 547 aaPredicted RBP14.92□□□□□ -0.02
FDPS-220ENST00000611010 ANKRD44Q8N8A2 993 aa14.92□□□□□ -0.02
FDPS-220ENST00000611010 SALL2Q9Y467 1007 aaPredicted RBP14.92□□□□□ -0.02
FDPS-220ENST00000611010 UTYO14607 1347 aa14.92□□□□□ -0.02
FDPS-220ENST00000611010 CHAF1AQ13111 956 aaPredicted RBP14.91□□□□□ -0.02
FDPS-220ENST00000611010 RABL6Q3YEC7 729 aaPredicted RBP14.91□□□□□ -0.02
FDPS-220ENST00000611010 APOBEC3HQ6NTF7 200 aaKnown RBP14.91□□□□□ -0.02
FDPS-220ENST00000611010 WRNIP1Q96S55 665 aa14.91□□□□□ -0.02
FDPS-220ENST00000611010 BICC1Q9H694 974 aaKnown RBP14.91□□□□□ -0.02
FDPS-220ENST00000611010 CSADQ9Y600 493 aa14.91□□□□□ -0.02
FDPS-220ENST00000611010 LAMA3Q16787 3333 aa14.91□□□□□ -0.02
FDPS-220ENST00000611010 DOCK1Q14185 1865 aa14.91□□□□□ -0.02
FDPS-220ENST00000611010 H0YGN5 161 aa14.9□□□□□ -0.02
FDPS-220ENST00000611010 ALDH1L1O75891 902 aa14.9□□□□□ -0.02
FDPS-220ENST00000611010 ECM2O94769 699 aaPredicted RBP14.9□□□□□ -0.02
FDPS-220ENST00000611010 MOGSQ13724 837 aa14.9□□□□□ -0.02
FDPS-220ENST00000611010 MTFR1Q15390 333 aa14.9□□□□□ -0.02
FDPS-220ENST00000611010 WDR63Q8IWG1 891 aa14.9□□□□□ -0.02
FDPS-220ENST00000611010 KLHDC4Q8TBB5 520 aa14.9□□□□□ -0.02
FDPS-220ENST00000611010 TMEM106CQ9BVX2 250 aa14.9□□□□□ -0.02
FDPS-220ENST00000611010 MYH2Q9UKX2 1941 aa14.9□□□□□ -0.02
FDPS-220ENST00000611010 INPP5BP32019 993 aa14.89□□□□□ -0.03
FDPS-220ENST00000611010 TNNI2P48788 182 aa14.89□□□□□ -0.03
FDPS-220ENST00000611010 HDLBPQ00341 1268 aaKnown RBP14.89□□□□□ -0.03
FDPS-220ENST00000611010 PPIL2Q13356 520 aa14.89□□□□□ -0.03
FDPS-220ENST00000611010 SLC4A10Q6U841 1118 aa14.89□□□□□ -0.03
FDPS-220ENST00000611010 ERO1BQ86YB8 467 aa14.89□□□□□ -0.03
FDPS-220ENST00000611010 TEKT1Q969V4 418 aa14.89□□□□□ -0.03
FDPS-220ENST00000611010 ZDHHC15Q96MV8 337 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms