RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 VGLL4Q14135 290 aa16.98■□□□□ 0.31
CTSA-212ENST00000606394 FAM43AQ8N2R8 423 aa16.98■□□□□ 0.31
CTSA-212ENST00000606394 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.98■□□□□ 0.31
CTSA-212ENST00000606394 CUL9Q8IWT3 2517 aa16.98■□□□□ 0.31
CTSA-212ENST00000606394 A0A1B0GUL6 1792 aa16.97■□□□□ 0.31
CTSA-212ENST00000606394 CETPP11597 493 aa16.97■□□□□ 0.31
CTSA-212ENST00000606394 LACTBP83111 547 aaPredicted RBP16.97■□□□□ 0.31
CTSA-212ENST00000606394 MFSD14BQ5SR56 506 aa16.97■□□□□ 0.31
CTSA-212ENST00000606394 G2E3Q7L622 706 aa16.97■□□□□ 0.31
CTSA-212ENST00000606394 HELBQ8NG08 1087 aaPredicted RBP16.97■□□□□ 0.31
CTSA-212ENST00000606394 DNAAF4Q8WXU2 420 aa16.97■□□□□ 0.31
CTSA-212ENST00000606394 SPDYE5A6NIY4 337 aa16.96■□□□□ 0.31
CTSA-212ENST00000606394 FLIIQ13045 1269 aa16.96■□□□□ 0.31
CTSA-212ENST00000606394 TWISTNBQ3B726 338 aaPredicted RBP16.96■□□□□ 0.31
CTSA-212ENST00000606394 DZIP1LQ8IYY4 767 aaKnown RBP16.96■□□□□ 0.31
CTSA-212ENST00000606394 NKX2-3Q8TAU0 364 aa16.96■□□□□ 0.31
CTSA-212ENST00000606394 TDRD3Q9H7E2 651 aaKnown RBP16.96■□□□□ 0.31
CTSA-212ENST00000606394 PRKRIP1Q9H875 184 aaPredicted RBP16.96■□□□□ 0.31
CTSA-212ENST00000606394 TTF2Q9UNY4 1162 aaKnown RBP16.96■□□□□ 0.31
CTSA-212ENST00000606394 TDRD7Q8NHU6 1098 aaKnown RBP16.95■□□□□ 0.3
CTSA-212ENST00000606394 SH3TC2Q8TF17 1288 aa16.95■□□□□ 0.3
CTSA-212ENST00000606394 CNKSR2Q8WXI2 1034 aa16.95■□□□□ 0.3
CTSA-212ENST00000606394 HOOK2Q96ED9 719 aa16.95■□□□□ 0.3
CTSA-212ENST00000606394 ARAP2Q8WZ64 1704 aa16.95■□□□□ 0.3
CTSA-212ENST00000606394 CACNA1FO60840 1977 aa16.95■□□□□ 0.3
CTSA-212ENST00000606394 FOXO4P98177 505 aa16.94■□□□□ 0.3
CTSA-212ENST00000606394 FKBP5Q13451 457 aaPredicted RBP16.94■□□□□ 0.3
CTSA-212ENST00000606394 SNAPC2Q13487 334 aa16.94■□□□□ 0.3
CTSA-212ENST00000606394 CHRDL2Q6WN34 429 aa16.94■□□□□ 0.3
CTSA-212ENST00000606394 LDHAL6AQ6ZMR3 332 aa16.94■□□□□ 0.3
CTSA-212ENST00000606394 ERO1BQ86YB8 467 aa16.94■□□□□ 0.3
CTSA-212ENST00000606394 TMEM39BQ9GZU3 492 aa16.94■□□□□ 0.3
CTSA-212ENST00000606394 JAG2Q9Y219 1238 aa16.94■□□□□ 0.3
CTSA-212ENST00000606394 CRKP46108 304 aa16.93■□□□□ 0.3
CTSA-212ENST00000606394 HDLBPQ00341 1268 aaKnown RBP16.93■□□□□ 0.3
CTSA-212ENST00000606394 UBE4AQ14139 1066 aa16.93■□□□□ 0.3
CTSA-212ENST00000606394 CCDC27Q2M243 656 aa16.93■□□□□ 0.3
CTSA-212ENST00000606394 CCDC57Q2TAC2 916 aa16.93■□□□□ 0.3
CTSA-212ENST00000606394 TSR2Q969E8 191 aaKnown RBP16.93■□□□□ 0.3
CTSA-212ENST00000606394 CHMP3Q9Y3E7 222 aa16.93■□□□□ 0.3
CTSA-212ENST00000606394 COL6A3P12111 3177 aa16.93■□□□□ 0.3
CTSA-212ENST00000606394 LAMA3Q16787 3333 aa16.93■□□□□ 0.3
CTSA-212ENST00000606394 TCP10L2B9ZVM9 353 aa16.92■□□□□ 0.3
CTSA-212ENST00000606394 BTBD19C9JJ37 291 aa16.92■□□□□ 0.3
CTSA-212ENST00000606394 MYCP01106 439 aaPredicted RBP16.92■□□□□ 0.3
CTSA-212ENST00000606394 HOXD10P28358 340 aa16.92■□□□□ 0.3
CTSA-212ENST00000606394 HIBADHP31937 336 aaKnown RBP16.92■□□□□ 0.3
CTSA-212ENST00000606394 PPIL2Q13356 520 aa16.92■□□□□ 0.3
CTSA-212ENST00000606394 CDAN1Q8IWY9 1227 aa16.92■□□□□ 0.3
CTSA-212ENST00000606394 DPF3Q92784 378 aa16.92■□□□□ 0.3
CTSA-212ENST00000606394 HTATIP2Q9BUP3 242 aa16.92■□□□□ 0.3
CTSA-212ENST00000606394 ARHGAP39Q9C0H5 1083 aa16.92■□□□□ 0.3
CTSA-212ENST00000606394 CNNM1Q9NRU3 951 aa16.92■□□□□ 0.3
CTSA-212ENST00000606394 RBM27Q9P2N5 1060 aaKnown RBP16.92■□□□□ 0.3
CTSA-212ENST00000606394 SNCAIPQ9Y6H5 919 aa16.92■□□□□ 0.3
CTSA-212ENST00000606394 TAF7LQ5H9L4 462 aa16.91■□□□□ 0.3
CTSA-212ENST00000606394 FKBP1CQ5VVH2 108 aa16.91■□□□□ 0.3
CTSA-212ENST00000606394 C17orf99Q6UX52 265 aa16.91■□□□□ 0.3
CTSA-212ENST00000606394 FAM83AQ86UY5 434 aa16.91■□□□□ 0.3
CTSA-212ENST00000606394 SHISA4Q96DD7 197 aa16.91■□□□□ 0.3
CTSA-212ENST00000606394 SRRDQ9UH36 339 aa16.91■□□□□ 0.3
CTSA-212ENST00000606394 A0A1W2PPC1 479 aa16.9■□□□□ 0.3
CTSA-212ENST00000606394 IRF6O14896 467 aa16.9■□□□□ 0.3
CTSA-212ENST00000606394 PLIN1O60240 522 aa16.9■□□□□ 0.3
CTSA-212ENST00000606394 GJB1P08034 283 aa16.9■□□□□ 0.3
CTSA-212ENST00000606394 CAPN2P17655 700 aa16.9■□□□□ 0.3
CTSA-212ENST00000606394 GJA8P48165 433 aa16.9■□□□□ 0.3
CTSA-212ENST00000606394 LMBR1LQ6UX01 489 aa16.9■□□□□ 0.3
CTSA-212ENST00000606394 UBE2Q1Q7Z7E8 422 aa16.9■□□□□ 0.3
CTSA-212ENST00000606394 TBC1D22AQ8WUA7 517 aa16.9■□□□□ 0.3
CTSA-212ENST00000606394 FAM84BQ96KN1 310 aaPredicted RBP16.9■□□□□ 0.3
CTSA-212ENST00000606394 MRIQ9BWK5 157 aa16.9■□□□□ 0.3
CTSA-212ENST00000606394 PRO3102Q9H379 93 aa16.9■□□□□ 0.3
CTSA-212ENST00000606394 NR2E3Q9Y5X4 410 aa16.9■□□□□ 0.3
CTSA-212ENST00000606394 IL16Q14005 1332 aa16.9■□□□□ 0.3
CTSA-212ENST00000606394 GRK4P32298 578 aa16.89■□□□□ 0.29
CTSA-212ENST00000606394 PPATQ06203 517 aa16.89■□□□□ 0.29
CTSA-212ENST00000606394 MTFR1Q15390 333 aa16.89■□□□□ 0.29
CTSA-212ENST00000606394 DCAF15Q66K64 600 aa16.89■□□□□ 0.29
CTSA-212ENST00000606394 WRNIP1Q96S55 665 aa16.89■□□□□ 0.29
CTSA-212ENST00000606394 PSMC4P43686 418 aa16.88■□□□□ 0.29
CTSA-212ENST00000606394 GYG1P46976 350 aa16.88■□□□□ 0.29
CTSA-212ENST00000606394 BEND3Q5T5X7 828 aa16.88■□□□□ 0.29
CTSA-212ENST00000606394 ANKRD23Q86SG2 305 aa16.88■□□□□ 0.29
CTSA-212ENST00000606394 RAET1EQ8TD07 263 aa16.88■□□□□ 0.29
CTSA-212ENST00000606394 TEKT1Q969V4 418 aa16.88■□□□□ 0.29
CTSA-212ENST00000606394 TRIM47Q96LD4 638 aa16.88■□□□□ 0.29
CTSA-212ENST00000606394 TMOD2Q9NZR1 351 aa16.88■□□□□ 0.29
CTSA-212ENST00000606394 RPAP1Q9BWH6 1393 aaPredicted RBP16.88■□□□□ 0.29
CTSA-212ENST00000606394 ZSWIM8A7E2V4 1837 aa16.87■□□□□ 0.29
CTSA-212ENST00000606394 NCBP3Q53F19 620 aaKnown RBP16.87■□□□□ 0.29
CTSA-212ENST00000606394 WWC1Q8IX03 1113 aa16.87■□□□□ 0.29
CTSA-212ENST00000606394 ZKSCAN4Q969J2 545 aaPredicted RBP16.87■□□□□ 0.29
CTSA-212ENST00000606394 ZNF594Q96JF6 807 aaPredicted RBP16.87■□□□□ 0.29
CTSA-212ENST00000606394 ZDHHC15Q96MV8 337 aa16.87■□□□□ 0.29
CTSA-212ENST00000606394 RIPOR2Q9Y4F9 1068 aa16.87■□□□□ 0.29
CTSA-212ENST00000606394 GRM8O00222 908 aa16.86■□□□□ 0.29
CTSA-212ENST00000606394 OSBPP22059 807 aa16.86■□□□□ 0.29
CTSA-212ENST00000606394 UBXN2AP68543 259 aa16.86■□□□□ 0.29
CTSA-212ENST00000606394 EPHA10Q5JZY3 1008 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms