RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 POLD1P28340 1107 aa11.2□□□□□ -0.62
NFKB1-212ENST00000600343 TPP2P29144 1249 aaPredicted RBP11.2□□□□□ -0.62
NFKB1-212ENST00000600343 AMOTQ4VCS5 1084 aa11.2□□□□□ -0.62
NFKB1-212ENST00000600343 YTHDF3Q7Z739 585 aaKnown RBP11.2□□□□□ -0.62
NFKB1-212ENST00000600343 MFN1Q8IWA4 741 aa11.2□□□□□ -0.62
NFKB1-212ENST00000600343 MAF1Q9H063 256 aa11.2□□□□□ -0.62
NFKB1-212ENST00000600343 RGL1Q9NZL6 768 aa11.2□□□□□ -0.62
NFKB1-212ENST00000600343 FESP07332 822 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 MIS18BP1Q6P0N0 1132 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 NECAB1Q8N987 351 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 OSBPL9Q96SU4 736 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 NSD3Q9BZ95 1437 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 CTAGE15A4D2H0 777 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 CTAGE8P0CG41 777 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 CWF19L1Q69YN2 538 aaKnown RBP11.19□□□□□ -0.62
NFKB1-212ENST00000600343 CCDC73Q6ZRK6 1079 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 BZW1Q7L1Q6 419 aaKnown RBP11.19□□□□□ -0.62
NFKB1-212ENST00000600343 CTAGE6Q86UF2 777 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 CTAGE4Q8IX94 777 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 TBC1D5Q92609 795 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 ZNF396Q96N95 335 aaPredicted RBP11.19□□□□□ -0.62
NFKB1-212ENST00000600343 MMTAG2Q9BU76 263 aaKnown RBP11.19□□□□□ -0.62
NFKB1-212ENST00000600343 HYPKQ9NX55 129 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 TRPC6Q9Y210 931 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.19□□□□□ -0.62
NFKB1-212ENST00000600343 C9orf84Q5VXU9 1444 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 OATP04181 439 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 DCTN1Q14203 1278 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 SPAG5Q96R06 1193 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 TMEM165Q9HC07 324 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 ELL2O00472 640 aaPredicted RBP11.19□□□□□ -0.62
NFKB1-212ENST00000600343 ZSCAN9O15535 394 aaPredicted RBP11.19□□□□□ -0.62
NFKB1-212ENST00000600343 KIF4AO95239 1232 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 CCAR1Q8IX12 1150 aaKnown RBP11.19□□□□□ -0.62
NFKB1-212ENST00000600343 ACRBPQ8NEB7 543 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 SMARCC2Q8TAQ2 1214 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 EPAS1Q99814 870 aa11.19□□□□□ -0.62
NFKB1-212ENST00000600343 VAMP4O75379 141 aa11.18□□□□□ -0.62
NFKB1-212ENST00000600343 CD151P48509 253 aa11.18□□□□□ -0.62
NFKB1-212ENST00000600343 PAPOLAP51003 745 aaKnown RBP11.18□□□□□ -0.62
NFKB1-212ENST00000600343 ACCSLQ4AC99 568 aa11.18□□□□□ -0.62
NFKB1-212ENST00000600343 ARHGEF40Q8TER5 1519 aa11.18□□□□□ -0.62
NFKB1-212ENST00000600343 SPDYE3A6NKU9 549 aa11.18□□□□□ -0.62
NFKB1-212ENST00000600343 FANCCQ00597 558 aa11.18□□□□□ -0.62
NFKB1-212ENST00000600343 AKAP17AQ02040 695 aaKnown RBP11.18□□□□□ -0.62
NFKB1-212ENST00000600343 ZRSR2Q15696 482 aaKnown RBP11.18□□□□□ -0.62
NFKB1-212ENST00000600343 FUKQ8N0W3 1084 aa11.18□□□□□ -0.62
NFKB1-212ENST00000600343 FAM81AQ8TBF8 368 aa11.18□□□□□ -0.62
NFKB1-212ENST00000600343 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.18□□□□□ -0.62
NFKB1-212ENST00000600343 RIPOR2Q9Y4F9 1068 aa11.18□□□□□ -0.62
NFKB1-212ENST00000600343 PCDHGC5Q9Y5F6 944 aa11.18□□□□□ -0.62
NFKB1-212ENST00000600343 ATP10DQ9P241 1426 aa11.18□□□□□ -0.62
NFKB1-212ENST00000600343 BUB1BO60566 1050 aaPredicted RBP11.18□□□□□ -0.62
NFKB1-212ENST00000600343 TOGARAM2Q6ZUX3 1019 aa11.18□□□□□ -0.62
NFKB1-212ENST00000600343 TRIM58Q8NG06 486 aa11.18□□□□□ -0.62
NFKB1-212ENST00000600343 NSMCE1Q8WV22 266 aa11.18□□□□□ -0.62
NFKB1-212ENST00000600343 ARHGEF5Q12774 1597 aa11.18□□□□□ -0.62
NFKB1-212ENST00000600343 ERICH2A1L162 156 aa11.17□□□□□ -0.62
NFKB1-212ENST00000600343 H7C1W4 665 aa11.17□□□□□ -0.62
NFKB1-212ENST00000600343 SMNDC1O75940 238 aaKnown RBP eCLIP11.17□□□□□ -0.62
NFKB1-212ENST00000600343 TOP1P11387 765 aaKnown RBP11.17□□□□□ -0.62
NFKB1-212ENST00000600343 ARHGAP22Q7Z5H3 698 aa11.17□□□□□ -0.62
NFKB1-212ENST00000600343 RASEFQ8IZ41 740 aa11.17□□□□□ -0.62
NFKB1-212ENST00000600343 CCDC47Q96A33 483 aaKnown RBP11.17□□□□□ -0.62
NFKB1-212ENST00000600343 PLEKHF1Q96S99 279 aa11.17□□□□□ -0.62
NFKB1-212ENST00000600343 TPD52L2O43399 206 aaKnown RBP11.17□□□□□ -0.62
NFKB1-212ENST00000600343 MAP4K4O95819 1239 aaPredicted RBP11.17□□□□□ -0.62
NFKB1-212ENST00000600343 LMOD1P29536 600 aaPredicted RBP11.17□□□□□ -0.62
NFKB1-212ENST00000600343 COG1Q8WTW3 980 aa11.17□□□□□ -0.62
NFKB1-212ENST00000600343 FMNL1O95466 1100 aaPredicted RBP11.17□□□□□ -0.62
NFKB1-212ENST00000600343 CEBPZQ03701 1054 aaKnown RBP11.17□□□□□ -0.62
NFKB1-212ENST00000600343 IFFO1Q0D2I5 559 aa11.17□□□□□ -0.62
NFKB1-212ENST00000600343 DBN1Q16643 649 aa11.17□□□□□ -0.62
NFKB1-212ENST00000600343 RRP12Q5JTH9 1297 aaKnown RBP11.17□□□□□ -0.62
NFKB1-212ENST00000600343 WDR93Q6P2C0 686 aa11.17□□□□□ -0.62
NFKB1-212ENST00000600343 RASSF8Q8NHQ8 419 aa11.17□□□□□ -0.62
NFKB1-212ENST00000600343 TBC1D31Q96DN5 1066 aa11.17□□□□□ -0.62
NFKB1-212ENST00000600343 GDAP1L1Q96MZ0 367 aa11.17□□□□□ -0.62
NFKB1-212ENST00000600343 TSPAN18Q96SJ8 248 aa11.17□□□□□ -0.62
NFKB1-212ENST00000600343 IL25Q9H293 177 aa11.17□□□□□ -0.62
NFKB1-212ENST00000600343 PAPOLBQ9NRJ5 636 aaKnown RBP11.17□□□□□ -0.62
NFKB1-212ENST00000600343 HOOK1Q9UJC3 728 aaKnown RBP11.17□□□□□ -0.62
NFKB1-212ENST00000600343 TRAPPC8Q9Y2L5 1435 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 PLA2R1Q13018 1463 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 EIF2S2P20042 333 aaKnown RBP11.16□□□□□ -0.62
NFKB1-212ENST00000600343 MYO1EQ12965 1108 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 TUBB2AQ13885 445 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 BRAPQ7Z569 592 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 ALS2CR12Q96Q35 445 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 TUBB2BQ9BVA1 445 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 CORO1CQ9ULV4 474 aaPredicted RBP11.16□□□□□ -0.62
NFKB1-212ENST00000600343 KIF24Q5T7B8 1368 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 CBFA2T2O43439 604 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 ROR2Q01974 943 aaKnown RBP11.16□□□□□ -0.62
NFKB1-212ENST00000600343 ST3GAL1Q11201 340 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 IFT88Q13099 833 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 ME3Q16798 604 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 CFAP100Q494V2 611 aa11.16□□□□□ -0.62
NFKB1-212ENST00000600343 LRRC23Q53EV4 343 aaPredicted RBP11.16□□□□□ -0.62
NFKB1-212ENST00000600343 MFSD4BQ5TF39 518 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms