RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 ALPK3Q96L96 1907 aa5.93□□□□□ -1.46
HERC3-213ENST00000598772 ZNF646O15015 1829 aaPredicted RBP5.93□□□□□ -1.46
HERC3-213ENST00000598772 CLRN2A0PK11 232 aa5.93□□□□□ -1.46
HERC3-213ENST00000598772 BTBD19C9JJ37 291 aa5.93□□□□□ -1.46
HERC3-213ENST00000598772 GPR37L1O60883 481 aa5.93□□□□□ -1.46
HERC3-213ENST00000598772 CETPP11597 493 aa5.93□□□□□ -1.46
HERC3-213ENST00000598772 FLT3LGP49771 235 aa5.93□□□□□ -1.46
HERC3-213ENST00000598772 EMP3P54852 163 aa5.93□□□□□ -1.46
HERC3-213ENST00000598772 TFF2Q03403 129 aa5.93□□□□□ -1.46
HERC3-213ENST00000598772 CSPP1Q1MSJ5 1256 aa5.93□□□□□ -1.46
HERC3-213ENST00000598772 C9orf50Q5SZB4 431 aa5.93□□□□□ -1.46
HERC3-213ENST00000598772 IL17REQ8NFR9 667 aa5.93□□□□□ -1.46
HERC3-213ENST00000598772 GMLQ99445 158 aa5.93□□□□□ -1.46
HERC3-213ENST00000598772 CRISPLD2Q9H0B8 497 aa5.93□□□□□ -1.46
HERC3-213ENST00000598772 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.93□□□□□ -1.46
HERC3-213ENST00000598772 MAP3K15Q6ZN16 1313 aa5.93□□□□□ -1.46
HERC3-213ENST00000598772 CHD8Q9HCK8 2581 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 BAHCC1Q9P281 2608 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 ERVV-1B6SEH8 477 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 SEC24BO95487 1268 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 BMP1P13497 986 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 CAPN2P17655 700 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 KCNQ1P51787 676 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 SMAD3P84022 425 aaKnown RBP5.92□□□□□ -1.46
HERC3-213ENST00000598772 DLGAP5Q15398 846 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 MAP3K11Q16584 847 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 LRRC26Q2I0M4 334 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 SLC10A5Q5PT55 438 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 C17orf99Q6UX52 265 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 TMC4Q7Z404 712 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 KIAA0825Q8IV33 1275 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 ANKLE1Q8NAG6 615 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 CELF1Q92879 486 aaKnown RBP5.92□□□□□ -1.46
HERC3-213ENST00000598772 FBXL18Q96ME1 805 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 GGA1Q9UJY5 639 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 CSADQ9Y600 493 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 KIF20BQ96Q89 1820 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 SPTBN4Q9H254 2564 aa5.92□□□□□ -1.46
HERC3-213ENST00000598772 FAM205CA6NFA0 338 aa5.91□□□□□ -1.46
HERC3-213ENST00000598772 GNAT3A8MTJ3 354 aa5.91□□□□□ -1.46
HERC3-213ENST00000598772 PARP10Q53GL7 1025 aa5.91□□□□□ -1.46
HERC3-213ENST00000598772 ZNF34Q8IZ26 560 aa5.91□□□□□ -1.46
HERC3-213ENST00000598772 TESK2Q96S53 571 aa5.91□□□□□ -1.46
HERC3-213ENST00000598772 PHOX2BQ99453 314 aa5.91□□□□□ -1.46
HERC3-213ENST00000598772 PRDM12Q9H4Q4 367 aa5.91□□□□□ -1.46
HERC3-213ENST00000598772 PAK6Q9NQU5 681 aaPredicted RBP5.91□□□□□ -1.46
HERC3-213ENST00000598772 PRDM5Q9NQX1 630 aaPredicted RBP5.91□□□□□ -1.46
HERC3-213ENST00000598772 TRMT112Q9UI30 125 aaKnown RBP5.91□□□□□ -1.46
HERC3-213ENST00000598772 CFAP54Q96N23 3096 aa5.9□□□□□ -1.46
HERC3-213ENST00000598772 CDH23Q9H251 3354 aa5.9□□□□□ -1.46
HERC3-213ENST00000598772 UNCXA6NJT0 531 aa5.9□□□□□ -1.46
HERC3-213ENST00000598772 PDHXO00330 501 aa5.9□□□□□ -1.46
HERC3-213ENST00000598772 TNPO2O14787 897 aaKnown RBP5.9□□□□□ -1.46
HERC3-213ENST00000598772 RBM5P52756 815 aaKnown RBP eCLIP5.9□□□□□ -1.46
HERC3-213ENST00000598772 MAP3K9P80192 1104 aa5.9□□□□□ -1.46
HERC3-213ENST00000598772 SNAPC2Q13487 334 aa5.9□□□□□ -1.46
HERC3-213ENST00000598772 RTL5Q5HYW3 569 aaPredicted RBP5.9□□□□□ -1.46
HERC3-213ENST00000598772 CCDC129Q6ZRS4 1044 aa5.9□□□□□ -1.46
HERC3-213ENST00000598772 KHSRPQ92945 711 aaKnown RBP eCLIP5.9□□□□□ -1.46
HERC3-213ENST00000598772 ZNF576Q9H609 170 aa5.9□□□□□ -1.46
HERC3-213ENST00000598772 HMX1Q9NP08 348 aaPredicted RBP5.9□□□□□ -1.46
HERC3-213ENST00000598772 C11orf16Q9NQ32 467 aa5.9□□□□□ -1.46
HERC3-213ENST00000598772 ADGRA2Q96PE1 1338 aa5.9□□□□□ -1.47
HERC3-213ENST00000598772 PTPRZ1P23471 2315 aaPredicted RBP5.9□□□□□ -1.47
HERC3-213ENST00000598772 SCN9AQ15858 1988 aa5.89□□□□□ -1.47
HERC3-213ENST00000598772 F8W031 263 aaPredicted RBP5.89□□□□□ -1.47
HERC3-213ENST00000598772 MYO1BO43795 1136 aa5.89□□□□□ -1.47
HERC3-213ENST00000598772 U2AF1L5P0DN76 240 aaPredicted RBP5.89□□□□□ -1.47
HERC3-213ENST00000598772 IL13P35225 146 aa5.89□□□□□ -1.47
HERC3-213ENST00000598772 RPS8P62241 208 aaKnown RBP5.89□□□□□ -1.47
HERC3-213ENST00000598772 U2AF1Q01081 240 aaKnown RBP eCLIP5.89□□□□□ -1.47
HERC3-213ENST00000598772 VGLL4Q14135 290 aa5.89□□□□□ -1.47
HERC3-213ENST00000598772 RASA3Q14644 834 aa5.89□□□□□ -1.47
HERC3-213ENST00000598772 AAK1Q2M2I8 961 aa5.89□□□□□ -1.47
HERC3-213ENST00000598772 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.89□□□□□ -1.47
HERC3-213ENST00000598772 RIC3Q7Z5B4 369 aa5.89□□□□□ -1.47
HERC3-213ENST00000598772 MORC1Q86VD1 984 aa5.89□□□□□ -1.47
HERC3-213ENST00000598772 BADQ92934 168 aa5.89□□□□□ -1.47
HERC3-213ENST00000598772 RNPC3Q96LT9 517 aaKnown RBP5.89□□□□□ -1.47
HERC3-213ENST00000598772 SENP6Q9GZR1 1112 aaPredicted RBP5.89□□□□□ -1.47
HERC3-213ENST00000598772 PCDHAC2Q9Y5I4 1007 aa5.89□□□□□ -1.47
HERC3-213ENST00000598772 PFASO15067 1338 aa5.89□□□□□ -1.47
HERC3-213ENST00000598772 ZFHX2Q9C0A1 2572 aaPredicted RBP5.89□□□□□ -1.47
HERC3-213ENST00000598772 DNAH12Q6ZR08 3092 aa5.88□□□□□ -1.47
HERC3-213ENST00000598772 WDFY4Q6ZS81 3184 aa5.88□□□□□ -1.47
HERC3-213ENST00000598772 DNAJB2P25686 324 aa5.88□□□□□ -1.47
HERC3-213ENST00000598772 TRIM32Q13049 653 aa5.88□□□□□ -1.47
HERC3-213ENST00000598772 DACT2Q5SW24 774 aa5.88□□□□□ -1.47
HERC3-213ENST00000598772 AKNAD1Q5T1N1 836 aa5.88□□□□□ -1.47
HERC3-213ENST00000598772 TTLL5Q6EMB2 1281 aa5.88□□□□□ -1.47
HERC3-213ENST00000598772 GIGYF2Q6Y7W6 1299 aaKnown RBP5.88□□□□□ -1.47
HERC3-213ENST00000598772 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.88□□□□□ -1.47
HERC3-213ENST00000598772 PXYLP1Q8TE99 480 aa5.88□□□□□ -1.47
HERC3-213ENST00000598772 COA7Q96BR5 231 aa5.88□□□□□ -1.47
HERC3-213ENST00000598772 TIFAQ96CG3 184 aa5.88□□□□□ -1.47
HERC3-213ENST00000598772 MIS18AQ9NYP9 233 aa5.88□□□□□ -1.47
HERC3-213ENST00000598772 CXXC1Q9P0U4 656 aaPredicted RBP5.88□□□□□ -1.47
HERC3-213ENST00000598772 ATP11BQ9Y2G3 1177 aa5.88□□□□□ -1.47
HERC3-213ENST00000598772 DUOX1Q9NRD9 1551 aa5.88□□□□□ -1.47
HERC3-213ENST00000598772 UBR2Q8IWV8 1755 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms