RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 AGXT2Q9BYV1 514 aa20.18■□□□□ 0.82
SHKBP1-216ENST00000598201 MTMR6Q9Y217 621 aa20.18■□□□□ 0.82
SHKBP1-216ENST00000598201 KLRK1P26718 216 aa20.18■□□□□ 0.82
SHKBP1-216ENST00000598201 FGD1P98174 961 aa20.18■□□□□ 0.82
SHKBP1-216ENST00000598201 NBPF3Q9H094 633 aa20.18■□□□□ 0.82
SHKBP1-216ENST00000598201 COL1A1P02452 1464 aaPredicted RBP20.18■□□□□ 0.82
SHKBP1-216ENST00000598201 NPHP1O15259 732 aa20.17■□□□□ 0.82
SHKBP1-216ENST00000598201 APOBRQ0VD83 1088 aa20.17■□□□□ 0.82
SHKBP1-216ENST00000598201 FAM84BQ96KN1 310 aaPredicted RBP20.17■□□□□ 0.82
SHKBP1-216ENST00000598201 F13A1P00488 732 aa20.17■□□□□ 0.82
SHKBP1-216ENST00000598201 GPT2Q8TD30 523 aa20.17■□□□□ 0.82
SHKBP1-216ENST00000598201 AIDAQ96BJ3 306 aa20.17■□□□□ 0.82
SHKBP1-216ENST00000598201 FSD2A1L4K1 749 aa20.16■□□□□ 0.82
SHKBP1-216ENST00000598201 ZNF213O14771 459 aa20.16■□□□□ 0.82
SHKBP1-216ENST00000598201 MBD4O95243 580 aa20.16■□□□□ 0.82
SHKBP1-216ENST00000598201 SLC51AQ86UW1 340 aa20.16■□□□□ 0.82
SHKBP1-216ENST00000598201 JAK2O60674 1132 aa20.15■□□□□ 0.82
SHKBP1-216ENST00000598201 APPP05067 770 aa20.15■□□□□ 0.82
SHKBP1-216ENST00000598201 SCRN1Q12765 414 aa20.15■□□□□ 0.82
SHKBP1-216ENST00000598201 CNBD1Q8NA66 436 aa20.15■□□□□ 0.82
SHKBP1-216ENST00000598201 ARMT1Q9H993 441 aa20.15■□□□□ 0.82
SHKBP1-216ENST00000598201 GDPD2Q9HCC8 539 aa20.15■□□□□ 0.82
SHKBP1-216ENST00000598201 GPHNQ9NQX3 736 aaPredicted RBP20.15■□□□□ 0.82
SHKBP1-216ENST00000598201 CAVIN4Q5BKX8 364 aa20.15■□□□□ 0.82
SHKBP1-216ENST00000598201 LARP1BQ659C4 914 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-216ENST00000598201 MB21D2Q8IYB1 491 aaPredicted RBP20.15■□□□□ 0.82
SHKBP1-216ENST00000598201 LRP2BPQ9P2M1 347 aa20.15■□□□□ 0.82
SHKBP1-216ENST00000598201 DENND2AQ9ULE3 1009 aa20.15■□□□□ 0.82
SHKBP1-216ENST00000598201 PFKFB2O60825 505 aa20.14■□□□□ 0.81
SHKBP1-216ENST00000598201 PRR5LQ6MZQ0 368 aa20.14■□□□□ 0.81
SHKBP1-216ENST00000598201 TBC1D10CQ8IV04 446 aa20.14■□□□□ 0.81
SHKBP1-216ENST00000598201 EPB41L4AQ9HCS5 686 aaPredicted RBP20.14■□□□□ 0.81
SHKBP1-216ENST00000598201 GNL3LQ9NVN8 582 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-216ENST00000598201 NSFL1CQ9UNZ2 370 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-216ENST00000598201 VPS37CA5D8V6 355 aaPredicted RBP20.14■□□□□ 0.81
SHKBP1-216ENST00000598201 NCLP19338 710 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-216ENST00000598201 FBXO33Q7Z6M2 555 aa20.14■□□□□ 0.81
SHKBP1-216ENST00000598201 NKX2-3Q8TAU0 364 aa20.14■□□□□ 0.81
SHKBP1-216ENST00000598201 ANTXR2P58335 489 aa20.13■□□□□ 0.81
SHKBP1-216ENST00000598201 VPS37DQ86XT2 251 aa20.13■□□□□ 0.81
SHKBP1-216ENST00000598201 ABCF2Q9UG63 623 aa20.13■□□□□ 0.81
SHKBP1-216ENST00000598201 SRCAPQ6ZRS2 3230 aa20.13■□□□□ 0.81
SHKBP1-216ENST00000598201 GOLGA6L3A6NEY3 463 aa20.12■□□□□ 0.81
SHKBP1-216ENST00000598201 PATL2C9JE40 543 aaKnown RBP20.12■□□□□ 0.81
SHKBP1-216ENST00000598201 PRKAB2O43741 272 aa20.12■□□□□ 0.81
SHKBP1-216ENST00000598201 ADGRA1Q86SQ6 560 aa20.12■□□□□ 0.81
SHKBP1-216ENST00000598201 LCORLQ8N3X6 602 aa20.12■□□□□ 0.81
SHKBP1-216ENST00000598201 FBXL16Q8N461 479 aa20.12■□□□□ 0.81
SHKBP1-216ENST00000598201 NCOA7Q8NI08 942 aa20.12■□□□□ 0.81
SHKBP1-216ENST00000598201 ANKRD2Q9GZV1 360 aa20.12■□□□□ 0.81
SHKBP1-216ENST00000598201 CNPY2Q9Y2B0 182 aa20.12■□□□□ 0.81
SHKBP1-216ENST00000598201 PRC1O43663 620 aa20.12■□□□□ 0.81
SHKBP1-216ENST00000598201 ST5P78524 1137 aa20.12■□□□□ 0.81
SHKBP1-216ENST00000598201 ALX1Q15699 326 aa20.12■□□□□ 0.81
SHKBP1-216ENST00000598201 CAVIN1Q6NZI2 390 aaKnown RBP20.12■□□□□ 0.81
SHKBP1-216ENST00000598201 CDC37L1Q7L3B6 337 aa20.12■□□□□ 0.81
SHKBP1-216ENST00000598201 MIGA1Q8NAN2 632 aa20.12■□□□□ 0.81
SHKBP1-216ENST00000598201 GSG1L2A8MUP6 293 aa20.11■□□□□ 0.81
SHKBP1-216ENST00000598201 CTDNEP1O95476 244 aa20.11■□□□□ 0.81
SHKBP1-216ENST00000598201 PDIA3P30101 505 aaKnown RBP20.11■□□□□ 0.81
SHKBP1-216ENST00000598201 MCM5P33992 734 aa20.11■□□□□ 0.81
SHKBP1-216ENST00000598201 USP48Q86UV5 1035 aa20.11■□□□□ 0.81
SHKBP1-216ENST00000598201 GAS2L3Q86XJ1 694 aa20.11■□□□□ 0.81
SHKBP1-216ENST00000598201 IFNL3Q8IZI9 196 aa20.11■□□□□ 0.81
SHKBP1-216ENST00000598201 TCHHQ07283 1943 aa20.11■□□□□ 0.81
SHKBP1-216ENST00000598201 NRXN2Q9P2S2 1712 aa20.11■□□□□ 0.81
SHKBP1-216ENST00000598201 CYP7A1P22680 504 aa20.11■□□□□ 0.81
SHKBP1-216ENST00000598201 CCT2P78371 535 aaKnown RBP20.11■□□□□ 0.81
SHKBP1-216ENST00000598201 TXNRD3Q86VQ6 643 aa20.11■□□□□ 0.81
SHKBP1-216ENST00000598201 NCOA5Q9HCD5 579 aaKnown RBP20.11■□□□□ 0.81
SHKBP1-216ENST00000598201 RBM27Q9P2N5 1060 aaKnown RBP20.11■□□□□ 0.81
SHKBP1-216ENST00000598201 PDCP20941 246 aa20.1■□□□□ 0.81
SHKBP1-216ENST00000598201 EVCP57679 992 aa20.1■□□□□ 0.81
SHKBP1-216ENST00000598201 GRAPQ13588 217 aa20.1■□□□□ 0.81
SHKBP1-216ENST00000598201 RALYLQ86SE5 291 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-216ENST00000598201 SMARCC2Q8TAQ2 1214 aa20.1■□□□□ 0.81
SHKBP1-216ENST00000598201 GRAPLQ8TC17 118 aaPredicted RBP20.1■□□□□ 0.81
SHKBP1-216ENST00000598201 DDX11Q96FC9 970 aa20.1■□□□□ 0.81
SHKBP1-216ENST00000598201 ZNF274Q96GC6 653 aaPredicted RBP20.1■□□□□ 0.81
SHKBP1-216ENST00000598201 RAI14Q9P0K7 980 aa20.1■□□□□ 0.81
SHKBP1-216ENST00000598201 GADD45BO75293 160 aaPredicted RBP20.09■□□□□ 0.81
SHKBP1-216ENST00000598201 NSUN7Q8NE18 718 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-216ENST00000598201 NAP1L2Q9ULW6 460 aaPredicted RBP20.09■□□□□ 0.81
SHKBP1-216ENST00000598201 ZMYM6O95789 1325 aa20.09■□□□□ 0.81
SHKBP1-216ENST00000598201 IRS2Q9Y4H2 1338 aa20.09■□□□□ 0.81
SHKBP1-216ENST00000598201 HIBADHP31937 336 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-216ENST00000598201 FERMT3Q86UX7 667 aa20.09■□□□□ 0.81
SHKBP1-216ENST00000598201 TMEM87AQ8NBN3 555 aa20.09■□□□□ 0.81
SHKBP1-216ENST00000598201 ZNF384Q8TF68 577 aa20.09■□□□□ 0.81
SHKBP1-216ENST00000598201 LLPHQ9BRT6 129 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-216ENST00000598201 NAPBQ9H115 298 aa20.09■□□□□ 0.81
SHKBP1-216ENST00000598201 INCENPQ9NQS7 918 aa20.09■□□□□ 0.81
SHKBP1-216ENST00000598201 PPP1R1BQ9UD71 204 aaPredicted RBP20.09■□□□□ 0.81
SHKBP1-216ENST00000598201 BRPF3Q9ULD4 1205 aa20.09■□□□□ 0.81
SHKBP1-216ENST00000598201 TACC3Q9Y6A5 838 aa20.09■□□□□ 0.81
SHKBP1-216ENST00000598201 SLC4A4Q9Y6R1 1079 aa20.09■□□□□ 0.81
SHKBP1-216ENST00000598201 DNM1Q05193 864 aaKnown RBP20.08■□□□□ 0.81
SHKBP1-216ENST00000598201 CYB5R4Q7L1T6 521 aa20.08■□□□□ 0.81
SHKBP1-216ENST00000598201 BRIP1Q9BX63 1249 aa20.08■□□□□ 0.81
SHKBP1-216ENST00000598201 ATP6V1DQ9Y5K8 247 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms