RNA–Protein interactions for RNA: ENST00000597360.5

PDE4C-211, Transcript of phosphodiesterase 4C, humanhuman

TSL 2

Gene PDE4C, Length 3,511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-211ENST00000597360 PSME1Q06323 249 aa17.67■□□□□ 0.42
PDE4C-211ENST00000597360 RNF187Q5TA31 235 aaPredicted RBP17.67■□□□□ 0.42
PDE4C-211ENST00000597360 GBP6Q6ZN66 633 aa17.67■□□□□ 0.42
PDE4C-211ENST00000597360 SAMM50Q9Y512 469 aa17.67■□□□□ 0.42
PDE4C-211ENST00000597360 PLEKHG2Q9H7P9 1386 aa17.67■□□□□ 0.42
PDE4C-211ENST00000597360 SHTN1A0MZ66 631 aa17.67■□□□□ 0.42
PDE4C-211ENST00000597360 CCDC172P0C7W6 258 aa17.67■□□□□ 0.42
PDE4C-211ENST00000597360 CWF19L2Q2TBE0 894 aaKnown RBP17.67■□□□□ 0.42
PDE4C-211ENST00000597360 SRGAP1Q7Z6B7 1085 aa17.67■□□□□ 0.42
PDE4C-211ENST00000597360 CEP112Q8N8E3 955 aa17.67■□□□□ 0.42
PDE4C-211ENST00000597360 MAP3K9P80192 1104 aa17.66■□□□□ 0.42
PDE4C-211ENST00000597360 ZNF827Q17R98 1081 aa17.66■□□□□ 0.42
PDE4C-211ENST00000597360 LRRC31Q6UY01 552 aa17.66■□□□□ 0.42
PDE4C-211ENST00000597360 KDM4FA0A1W2PPD8 638 aa17.66■□□□□ 0.42
PDE4C-211ENST00000597360 HAND2P61296 217 aa17.66■□□□□ 0.42
PDE4C-211ENST00000597360 PNKPQ96T60 521 aa17.66■□□□□ 0.42
PDE4C-211ENST00000597360 CEP83Q9Y592 693 aa17.66■□□□□ 0.42
PDE4C-211ENST00000597360 CTAGE9A4FU28 777 aa17.65■□□□□ 0.42
PDE4C-211ENST00000597360 EFCAB13Q8IY85 973 aa17.65■□□□□ 0.42
PDE4C-211ENST00000597360 EAF2Q96CJ1 260 aaPredicted RBP17.65■□□□□ 0.42
PDE4C-211ENST00000597360 CORO7P57737 925 aa17.65■□□□□ 0.42
PDE4C-211ENST00000597360 VSNL1P62760 191 aa17.65■□□□□ 0.42
PDE4C-211ENST00000597360 HMG20BQ9P0W2 317 aa17.65■□□□□ 0.42
PDE4C-211ENST00000597360 INPP5BP32019 993 aa17.65■□□□□ 0.42
PDE4C-211ENST00000597360 STX17P56962 302 aa17.65■□□□□ 0.42
PDE4C-211ENST00000597360 ATP2B2Q01814 1243 aa17.65■□□□□ 0.42
PDE4C-211ENST00000597360 ADALQ6DHV7 355 aa17.65■□□□□ 0.42
PDE4C-211ENST00000597360 FMR1NBQ8N0W7 255 aaPredicted RBP17.65■□□□□ 0.42
PDE4C-211ENST00000597360 USHBP1Q8N6Y0 703 aa17.65■□□□□ 0.42
PDE4C-211ENST00000597360 A0A087WUV0 522 aaPredicted RBP17.64■□□□□ 0.42
PDE4C-211ENST00000597360 SOWAHDA6NJG2 315 aa17.64■□□□□ 0.42
PDE4C-211ENST00000597360 POTEB2H3BUK9 544 aa17.64■□□□□ 0.42
PDE4C-211ENST00000597360 FANCGO15287 622 aa17.64■□□□□ 0.42
PDE4C-211ENST00000597360 PFKFB1P16118 471 aa17.64■□□□□ 0.42
PDE4C-211ENST00000597360 ATG3Q9NT62 314 aa17.64■□□□□ 0.42
PDE4C-211ENST00000597360 CAPN7Q9Y6W3 813 aa17.64■□□□□ 0.42
PDE4C-211ENST00000597360 RUFY1Q96T51 708 aa17.64■□□□□ 0.41
PDE4C-211ENST00000597360 PPFIA4O75335 1185 aa17.64■□□□□ 0.41
PDE4C-211ENST00000597360 SSBP05455 408 aaKnown RBP eCLIP17.64■□□□□ 0.41
PDE4C-211ENST00000597360 CEP57Q86XR8 500 aa17.64■□□□□ 0.41
PDE4C-211ENST00000597360 NSUN7Q8NE18 718 aaKnown RBP17.64■□□□□ 0.41
PDE4C-211ENST00000597360 KCNG4Q8TDN1 519 aa17.64■□□□□ 0.41
PDE4C-211ENST00000597360 PSD3Q9NYI0 1048 aa17.64■□□□□ 0.41
PDE4C-211ENST00000597360 SUFUQ9UMX1 484 aa17.64■□□□□ 0.41
PDE4C-211ENST00000597360 ZEB2O60315 1214 aa17.63■□□□□ 0.41
PDE4C-211ENST00000597360 PPP2R5AQ15172 486 aa17.63■□□□□ 0.41
PDE4C-211ENST00000597360 CCDC148Q8NFR7 591 aa17.63■□□□□ 0.41
PDE4C-211ENST00000597360 BCAS4Q8TDM0 211 aa17.63■□□□□ 0.41
PDE4C-211ENST00000597360 CDC5LQ99459 802 aaKnown RBP17.63■□□□□ 0.41
PDE4C-211ENST00000597360 CCDC61Q9Y6R9 512 aa17.63■□□□□ 0.41
PDE4C-211ENST00000597360 GNAT3A8MTJ3 354 aa17.63■□□□□ 0.41
PDE4C-211ENST00000597360 FAM71BQ8TC56 605 aa17.63■□□□□ 0.41
PDE4C-211ENST00000597360 POLD4Q9HCU8 107 aa17.63■□□□□ 0.41
PDE4C-211ENST00000597360 ENGASEQ8NFI3 743 aa17.63■□□□□ 0.41
PDE4C-211ENST00000597360 NFE2L3Q9Y4A8 694 aa17.63■□□□□ 0.41
PDE4C-211ENST00000597360 FRMD3A2A2Y4 597 aa17.62■□□□□ 0.41
PDE4C-211ENST00000597360 CUTAO60888 179 aa17.62■□□□□ 0.41
PDE4C-211ENST00000597360 BRD2P25440 801 aaKnown RBP17.62■□□□□ 0.41
PDE4C-211ENST00000597360 MAP3K19Q56UN5 1328 aa17.62■□□□□ 0.41
PDE4C-211ENST00000597360 EIF5P55010 431 aaKnown RBP17.62■□□□□ 0.41
PDE4C-211ENST00000597360 NBPF6Q5VWK0 638 aa17.62■□□□□ 0.41
PDE4C-211ENST00000597360 ANKLE2Q86XL3 938 aa17.62■□□□□ 0.41
PDE4C-211ENST00000597360 VSTM4Q8IW00 320 aa17.62■□□□□ 0.41
PDE4C-211ENST00000597360 SLC35F6Q8N357 371 aa17.62■□□□□ 0.41
PDE4C-211ENST00000597360 NBPF4Q96M43 638 aa17.62■□□□□ 0.41
PDE4C-211ENST00000597360 ZNF142P52746 1687 aaPredicted RBP17.62■□□□□ 0.41
PDE4C-211ENST00000597360 BEND6Q5SZJ8 279 aaPredicted RBP17.61■□□□□ 0.41
PDE4C-211ENST00000597360 NAA16Q6N069 864 aaPredicted RBP17.61■□□□□ 0.41
PDE4C-211ENST00000597360 NOC3LQ8WTT2 800 aaKnown RBP17.61■□□□□ 0.41
PDE4C-211ENST00000597360 MRPL44Q9H9J2 332 aaKnown RBP17.61■□□□□ 0.41
PDE4C-211ENST00000597360 CDC23Q9UJX2 597 aa17.61■□□□□ 0.41
PDE4C-211ENST00000597360 PTPRUQ92729 1446 aa17.61■□□□□ 0.41
PDE4C-211ENST00000597360 CYP21A2P08686 494 aa17.61■□□□□ 0.41
PDE4C-211ENST00000597360 MATR3P43243 847 aaKnown RBP eCLIP17.61■□□□□ 0.41
PDE4C-211ENST00000597360 GUCA1BQ9UMX6 200 aa17.61■□□□□ 0.41
PDE4C-211ENST00000597360 MAP3K2Q9Y2U5 619 aa17.61■□□□□ 0.41
PDE4C-211ENST00000597360 NCAPH2Q6IBW4 605 aa17.61■□□□□ 0.41
PDE4C-211ENST00000597360 GSPT2Q8IYD1 628 aaKnown RBP17.61■□□□□ 0.41
PDE4C-211ENST00000597360 FAM76AQ8TAV0 307 aa17.61■□□□□ 0.41
PDE4C-211ENST00000597360 U3KPZ7 1027 aaPredicted RBP17.61■□□□□ 0.41
PDE4C-211ENST00000597360 CPSF1Q10570 1443 aaKnown RBP17.61■□□□□ 0.41
PDE4C-211ENST00000597360 ATP2C2O75185 946 aa17.6■□□□□ 0.41
PDE4C-211ENST00000597360 TAF5LO75529 589 aa17.6■□□□□ 0.41
PDE4C-211ENST00000597360 OTUD6BQ8N6M0 293 aa17.6■□□□□ 0.41
PDE4C-211ENST00000597360 TBX22Q9Y458 520 aa17.6■□□□□ 0.41
PDE4C-211ENST00000597360 CLIC6Q96NY7 704 aa17.6■□□□□ 0.41
PDE4C-211ENST00000597360 GPHNQ9NQX3 736 aaPredicted RBP17.6■□□□□ 0.41
PDE4C-211ENST00000597360 FAM169AQ9Y6X4 670 aa17.6■□□□□ 0.41
PDE4C-211ENST00000597360 GOLGA8BA8MQT2 603 aa17.6■□□□□ 0.41
PDE4C-211ENST00000597360 WASLO00401 505 aaPredicted RBP17.6■□□□□ 0.41
PDE4C-211ENST00000597360 SPECC1LQ69YQ0 1117 aa17.6■□□□□ 0.41
PDE4C-211ENST00000597360 RSRC2Q7L4I2 434 aaKnown RBP17.6■□□□□ 0.41
PDE4C-211ENST00000597360 ROBO2Q9HCK4 1378 aa17.59■□□□□ 0.41
PDE4C-211ENST00000597360 A0A0U1RQJ8 604 aa17.59■□□□□ 0.41
PDE4C-211ENST00000597360 GIGYF1O75420 1035 aaPredicted RBP17.59■□□□□ 0.41
PDE4C-211ENST00000597360 RXRAP19793 462 aa17.59■□□□□ 0.41
PDE4C-211ENST00000597360 CCDC102BQ68D86 513 aa17.59■□□□□ 0.41
PDE4C-211ENST00000597360 DHX32Q7L7V1 743 aaKnown RBP17.59■□□□□ 0.41
PDE4C-211ENST00000597360 ATRIPQ8WXE1 791 aa17.59■□□□□ 0.41
PDE4C-211ENST00000597360 GOLGA6CA6NDK9 693 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms