RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 PPIP5K2O43314 1243 aa17.71■□□□□ 0.43
SHKBP1-211ENST00000595945 IL17RAQ96F46 866 aa17.71■□□□□ 0.43
SHKBP1-211ENST00000595945 DBNDD1Q9H9R9 158 aa17.71■□□□□ 0.43
SHKBP1-211ENST00000595945 BCS1LQ9Y276 419 aa17.71■□□□□ 0.43
SHKBP1-211ENST00000595945 LAMA4Q16363 1823 aa17.7■□□□□ 0.42
SHKBP1-211ENST00000595945 FOXP2O15409 715 aa17.7■□□□□ 0.42
SHKBP1-211ENST00000595945 CYP7A1P22680 504 aa17.7■□□□□ 0.42
SHKBP1-211ENST00000595945 HSPA4P34932 840 aa17.7■□□□□ 0.42
SHKBP1-211ENST00000595945 FKBP1AP62942 108 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-211ENST00000595945 GTF2IP78347 998 aa17.7■□□□□ 0.42
SHKBP1-211ENST00000595945 MECOMQ03112 1051 aa17.7■□□□□ 0.42
SHKBP1-211ENST00000595945 GRIK5Q16478 980 aa17.7■□□□□ 0.42
SHKBP1-211ENST00000595945 ADGRA1Q86SQ6 560 aa17.7■□□□□ 0.42
SHKBP1-211ENST00000595945 KCNB2Q92953 911 aa17.7■□□□□ 0.42
SHKBP1-211ENST00000595945 KIF2CQ99661 725 aa17.7■□□□□ 0.42
SHKBP1-211ENST00000595945 DSCC1Q9BVC3 393 aa17.7■□□□□ 0.42
SHKBP1-211ENST00000595945 SUGT1Q9Y2Z0 365 aa17.7■□□□□ 0.42
SHKBP1-211ENST00000595945 GPAA1O43292 621 aa17.69■□□□□ 0.42
SHKBP1-211ENST00000595945 LDHBP07195 334 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-211ENST00000595945 TTLL5Q6EMB2 1281 aa17.69■□□□□ 0.42
SHKBP1-211ENST00000595945 NAA16Q6N069 864 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-211ENST00000595945 CERS5Q8N5B7 392 aa17.69■□□□□ 0.42
SHKBP1-211ENST00000595945 ZNF277Q9NRM2 450 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-211ENST00000595945 YDJCA8MPS7 323 aa17.68■□□□□ 0.42
SHKBP1-211ENST00000595945 G3V3G9 751 aa17.68■□□□□ 0.42
SHKBP1-211ENST00000595945 SOCS7O14512 581 aa17.68■□□□□ 0.42
SHKBP1-211ENST00000595945 IARSP41252 1262 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-211ENST00000595945 NECTIN1Q15223 517 aa17.68■□□□□ 0.42
SHKBP1-211ENST00000595945 MFSD14BQ5SR56 506 aa17.68■□□□□ 0.42
SHKBP1-211ENST00000595945 DCAF8Q5TAQ9 597 aa17.68■□□□□ 0.42
SHKBP1-211ENST00000595945 VPS53Q5VIR6 699 aa17.68■□□□□ 0.42
SHKBP1-211ENST00000595945 STRIP1Q5VSL9 837 aa17.68■□□□□ 0.42
SHKBP1-211ENST00000595945 STRBPQ96SI9 672 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-211ENST00000595945 SYT17Q9BSW7 474 aa17.68■□□□□ 0.42
SHKBP1-211ENST00000595945 TAOK3Q9H2K8 898 aa17.68■□□□□ 0.42
SHKBP1-211ENST00000595945 KCNQ5Q9NR82 932 aa17.68■□□□□ 0.42
SHKBP1-211ENST00000595945 RBM8AQ9Y5S9 174 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-211ENST00000595945 FOCADQ5VW36 1801 aa17.68■□□□□ 0.42
SHKBP1-211ENST00000595945 BAZ2AQ9UIF9 1905 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-211ENST00000595945 ADAMTSL1Q8N6G6 1762 aa17.67■□□□□ 0.42
SHKBP1-211ENST00000595945 MBD4O95243 580 aa17.67■□□□□ 0.42
SHKBP1-211ENST00000595945 HSPD1P10809 573 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-211ENST00000595945 MCCP23508 829 aa17.67■□□□□ 0.42
SHKBP1-211ENST00000595945 ANAPC15P60006 121 aa17.67■□□□□ 0.42
SHKBP1-211ENST00000595945 DACT2Q5SW24 774 aa17.67■□□□□ 0.42
SHKBP1-211ENST00000595945 LARGE2Q8N3Y3 721 aa17.67■□□□□ 0.42
SHKBP1-211ENST00000595945 RIOK1Q9BRS2 568 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-211ENST00000595945 PALD1Q9ULE6 856 aa17.67■□□□□ 0.42
SHKBP1-211ENST00000595945 U3KPZ7 1027 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-211ENST00000595945 ECM29Q5VYK3 1845 aa17.67■□□□□ 0.42
SHKBP1-211ENST00000595945 USP17L3A6NCW0 530 aa17.66■□□□□ 0.42
SHKBP1-211ENST00000595945 USP17L4A6NCW7 530 aa17.66■□□□□ 0.42
SHKBP1-211ENST00000595945 GSTO1P78417 241 aa17.66■□□□□ 0.42
SHKBP1-211ENST00000595945 USP17L1Q7RTZ2 530 aa17.66■□□□□ 0.42
SHKBP1-211ENST00000595945 DZIP1Q86YF9 867 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-211ENST00000595945 AIDAQ96BJ3 306 aa17.66■□□□□ 0.42
SHKBP1-211ENST00000595945 LCORLQ8N3X6 602 aa17.65■□□□□ 0.42
SHKBP1-211ENST00000595945 FAM163AQ96GL9 167 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-211ENST00000595945 ARMT1Q9H993 441 aa17.65■□□□□ 0.42
SHKBP1-211ENST00000595945 GAKO14976 1311 aa17.65■□□□□ 0.42
SHKBP1-211ENST00000595945 RPAP1Q9BWH6 1393 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-211ENST00000595945 MAGEB6P1A0A0J9YX57 407 aa17.64■□□□□ 0.41
SHKBP1-211ENST00000595945 SLC27A2O14975 620 aa17.64■□□□□ 0.41
SHKBP1-211ENST00000595945 LDHCP07864 332 aa17.64■□□□□ 0.41
SHKBP1-211ENST00000595945 GNAT2P19087 354 aa17.64■□□□□ 0.41
SHKBP1-211ENST00000595945 PRELPP51888 382 aa17.64■□□□□ 0.41
SHKBP1-211ENST00000595945 ALX1Q15699 326 aa17.64■□□□□ 0.41
SHKBP1-211ENST00000595945 CREB3L3Q68CJ9 461 aa17.64■□□□□ 0.41
SHKBP1-211ENST00000595945 RASEFQ8IZ41 740 aa17.64■□□□□ 0.41
SHKBP1-211ENST00000595945 MIGA1Q8NAN2 632 aa17.64■□□□□ 0.41
SHKBP1-211ENST00000595945 MXD3Q9BW11 206 aa17.64■□□□□ 0.41
SHKBP1-211ENST00000595945 SNX14Q9Y5W7 946 aa17.64■□□□□ 0.41
SHKBP1-211ENST00000595945 MROH7-TTC4A0A0A0MT08 1334 aa17.64■□□□□ 0.41
SHKBP1-211ENST00000595945 ZMYM6O95789 1325 aa17.64■□□□□ 0.41
SHKBP1-211ENST00000595945 NAV1Q8NEY1 1877 aa17.63■□□□□ 0.41
SHKBP1-211ENST00000595945 PPP4CP60510 307 aa17.63■□□□□ 0.41
SHKBP1-211ENST00000595945 DYNLL1P63167 89 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-211ENST00000595945 DIXDC1Q155Q3 683 aa17.63■□□□□ 0.41
SHKBP1-211ENST00000595945 TSGA10IPQ3SY00 556 aa17.63■□□□□ 0.41
SHKBP1-211ENST00000595945 NIM1KQ8IY84 436 aa17.63■□□□□ 0.41
SHKBP1-211ENST00000595945 FBXW7Q969H0 707 aa17.63■□□□□ 0.41
SHKBP1-211ENST00000595945 ZNRF3Q9ULT6 936 aa17.63■□□□□ 0.41
SHKBP1-211ENST00000595945 LAMB1P07942 1786 aa17.63■□□□□ 0.41
SHKBP1-211ENST00000595945 GPR75-ASB3A0A0A6YYF3 556 aa17.62■□□□□ 0.41
SHKBP1-211ENST00000595945 GSG1L2A8MUP6 293 aa17.62■□□□□ 0.41
SHKBP1-211ENST00000595945 PATL2C9JE40 543 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-211ENST00000595945 ANP32AP39687 249 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-211ENST00000595945 RASSF7Q02833 373 aa17.62■□□□□ 0.41
SHKBP1-211ENST00000595945 SLF2Q8IX21 1173 aa17.62■□□□□ 0.41
SHKBP1-211ENST00000595945 MRIQ9BWK5 157 aa17.62■□□□□ 0.41
SHKBP1-211ENST00000595945 EPB41L4AQ9HCS5 686 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-211ENST00000595945 DDX60LQ5H9U9 1706 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-211ENST00000595945 TIAM2Q8IVF5 1701 aa17.61■□□□□ 0.41
SHKBP1-211ENST00000595945 MYH1P12882 1939 aa17.61■□□□□ 0.41
SHKBP1-211ENST00000595945 PRKAB2O43741 272 aa17.61■□□□□ 0.41
SHKBP1-211ENST00000595945 FGAP02671 866 aa17.61■□□□□ 0.41
SHKBP1-211ENST00000595945 VIL1P09327 827 aaKnown RBP17.61■□□□□ 0.41
SHKBP1-211ENST00000595945 RABEP1Q15276 862 aa17.61■□□□□ 0.41
SHKBP1-211ENST00000595945 GMLQ99445 158 aa17.61■□□□□ 0.41
SHKBP1-211ENST00000595945 PSMD14O00487 310 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms