RNA–Protein interactions for RNA: ENST00000595514.1

NOTCH3-203, Transcript of notch 3, humanhuman

TSL 3

Gene NOTCH3, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-203ENST00000595514 SNAPC2Q13487 334 aa13.2□□□□□ -0.3
NOTCH3-203ENST00000595514 DIEXFQ68CQ4 756 aaKnown RBP13.2□□□□□ -0.3
NOTCH3-203ENST00000595514 C7orf61Q8IZ16 206 aa13.2□□□□□ -0.3
NOTCH3-203ENST00000595514 CERS5Q8N5B7 392 aa13.2□□□□□ -0.3
NOTCH3-203ENST00000595514 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.2□□□□□ -0.3
NOTCH3-203ENST00000595514 MYD88Q99836 296 aa13.2□□□□□ -0.3
NOTCH3-203ENST00000595514 CD209Q9NNX6 404 aa13.2□□□□□ -0.3
NOTCH3-203ENST00000595514 CWC25Q9NXE8 425 aaPredicted RBP13.2□□□□□ -0.3
NOTCH3-203ENST00000595514 AOX1Q06278 1338 aa13.19□□□□□ -0.3
NOTCH3-203ENST00000595514 COL9A1P20849 921 aa13.19□□□□□ -0.3
NOTCH3-203ENST00000595514 KCNJ4P48050 445 aa13.19□□□□□ -0.3
NOTCH3-203ENST00000595514 LMOD3Q0VAK6 560 aa13.19□□□□□ -0.3
NOTCH3-203ENST00000595514 NECAB2Q7Z6G3 386 aa13.19□□□□□ -0.3
NOTCH3-203ENST00000595514 PAWRQ96IZ0 340 aaKnown RBP13.19□□□□□ -0.3
NOTCH3-203ENST00000595514 DEFB118Q96PH6 123 aa13.19□□□□□ -0.3
NOTCH3-203ENST00000595514 IGHMBP2P38935 993 aaKnown RBP13.18□□□□□ -0.3
NOTCH3-203ENST00000595514 FCGRTP55899 365 aa13.18□□□□□ -0.3
NOTCH3-203ENST00000595514 ERO1BQ86YB8 467 aa13.18□□□□□ -0.3
NOTCH3-203ENST00000595514 UBE2OQ9C0C9 1292 aaKnown RBP13.18□□□□□ -0.3
NOTCH3-203ENST00000595514 ANKRD2Q9GZV1 360 aa13.18□□□□□ -0.3
NOTCH3-203ENST00000595514 GREM2Q9H772 168 aa13.18□□□□□ -0.3
NOTCH3-203ENST00000595514 ADAMTS8Q9UP79 889 aa13.18□□□□□ -0.3
NOTCH3-203ENST00000595514 OTOFQ9HC10 1997 aa13.18□□□□□ -0.3
NOTCH3-203ENST00000595514 IRS2Q9Y4H2 1338 aa13.17□□□□□ -0.3
NOTCH3-203ENST00000595514 EYSQ5T1H1 3165 aa13.17□□□□□ -0.3
NOTCH3-203ENST00000595514 IRF6O14896 467 aa13.17□□□□□ -0.3
NOTCH3-203ENST00000595514 HOXB7P09629 217 aa13.17□□□□□ -0.3
NOTCH3-203ENST00000595514 MAGEA10P43363 369 aaPredicted RBP13.17□□□□□ -0.3
NOTCH3-203ENST00000595514 SPDYE2Q495Y8 402 aa13.17□□□□□ -0.3
NOTCH3-203ENST00000595514 CDAN1Q8IWY9 1227 aa13.17□□□□□ -0.3
NOTCH3-203ENST00000595514 TTLL11Q8NHH1 800 aa13.17□□□□□ -0.3
NOTCH3-203ENST00000595514 TEPSINQ96N21 525 aa13.17□□□□□ -0.3
NOTCH3-203ENST00000595514 MRS2Q9HD23 443 aa13.17□□□□□ -0.3
NOTCH3-203ENST00000595514 ZNF70Q9UC06 446 aaPredicted RBP13.17□□□□□ -0.3
NOTCH3-203ENST00000595514 ADCY3O60266 1144 aa13.16□□□□□ -0.3
NOTCH3-203ENST00000595514 INHAP05111 366 aa13.16□□□□□ -0.3
NOTCH3-203ENST00000595514 SYN1P17600 705 aa13.16□□□□□ -0.3
NOTCH3-203ENST00000595514 TMPOP42166 694 aaKnown RBP13.16□□□□□ -0.3
NOTCH3-203ENST00000595514 TNNI2P48788 182 aa13.16□□□□□ -0.3
NOTCH3-203ENST00000595514 FKBP1AP62942 108 aaKnown RBP13.16□□□□□ -0.3
NOTCH3-203ENST00000595514 PPIL2Q13356 520 aa13.16□□□□□ -0.3
NOTCH3-203ENST00000595514 WDR43Q15061 677 aaKnown RBP eCLIP13.16□□□□□ -0.3
NOTCH3-203ENST00000595514 GUCD1Q96NT3 240 aa13.16□□□□□ -0.3
NOTCH3-203ENST00000595514 SNCAIPQ9Y6H5 919 aa13.16□□□□□ -0.3
NOTCH3-203ENST00000595514 TTC28Q96AY4 2481 aa13.16□□□□□ -0.3
NOTCH3-203ENST00000595514 ADGRA2Q96PE1 1338 aa13.15□□□□□ -0.3
NOTCH3-203ENST00000595514 TCP10L2B9ZVM9 353 aa13.15□□□□□ -0.3
NOTCH3-203ENST00000595514 CCER2I3L3R5 266 aa13.15□□□□□ -0.3
NOTCH3-203ENST00000595514 PDHXO00330 501 aa13.15□□□□□ -0.3
NOTCH3-203ENST00000595514 CHL1O00533 1208 aa13.15□□□□□ -0.3
NOTCH3-203ENST00000595514 FAM109BQ6ICB4 259 aaPredicted RBP13.15□□□□□ -0.3
NOTCH3-203ENST00000595514 ANKRD23Q86SG2 305 aa13.15□□□□□ -0.3
NOTCH3-203ENST00000595514 DIS3LQ8TF46 1054 aaKnown RBP13.15□□□□□ -0.3
NOTCH3-203ENST00000595514 WRNIP1Q96S55 665 aa13.15□□□□□ -0.3
NOTCH3-203ENST00000595514 TMEM39BQ9GZU3 492 aa13.15□□□□□ -0.3
NOTCH3-203ENST00000595514 CRISPLD2Q9H0B8 497 aa13.15□□□□□ -0.3
NOTCH3-203ENST00000595514 TDRD3Q9H7E2 651 aaKnown RBP13.15□□□□□ -0.3
NOTCH3-203ENST00000595514 LAS1LQ9Y4W2 734 aaKnown RBP13.15□□□□□ -0.3
NOTCH3-203ENST00000595514 ECM29Q5VYK3 1845 aa13.14□□□□□ -0.31
NOTCH3-203ENST00000595514 MUC3AQ02505 3323 aa13.14□□□□□ -0.31
NOTCH3-203ENST00000595514 ELNP15502 786 aa13.14□□□□□ -0.31
NOTCH3-203ENST00000595514 NEUROD2Q15784 382 aa13.14□□□□□ -0.31
NOTCH3-203ENST00000595514 FAM161BQ96MY7 647 aa13.14□□□□□ -0.31
NOTCH3-203ENST00000595514 MPHOSPH8Q99549 860 aa13.14□□□□□ -0.31
NOTCH3-203ENST00000595514 PAK6Q9NQU5 681 aaPredicted RBP13.14□□□□□ -0.31
NOTCH3-203ENST00000595514 GABRQQ9UN88 632 aa13.14□□□□□ -0.31
NOTCH3-203ENST00000595514 JAG2Q9Y219 1238 aa13.14□□□□□ -0.31
NOTCH3-203ENST00000595514 FAM205AQ6ZU69 1335 aa13.13□□□□□ -0.31
NOTCH3-203ENST00000595514 PRUNE2Q8WUY3 3088 aa13.13□□□□□ -0.31
NOTCH3-203ENST00000595514 ZNF804AQ7Z570 1209 aa13.13□□□□□ -0.31
NOTCH3-203ENST00000595514 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.13□□□□□ -0.31
NOTCH3-203ENST00000595514 PXYLP1Q8TE99 480 aa13.13□□□□□ -0.31
NOTCH3-203ENST00000595514 SYMPKQ92797 1274 aaKnown RBP13.13□□□□□ -0.31
NOTCH3-203ENST00000595514 ZKSCAN4Q969J2 545 aaPredicted RBP13.13□□□□□ -0.31
NOTCH3-203ENST00000595514 RUNDC1Q96C34 613 aa13.13□□□□□ -0.31
NOTCH3-203ENST00000595514 PARK7Q99497 189 aaKnown RBP13.13□□□□□ -0.31
NOTCH3-203ENST00000595514 POTEB2H3BUK9 544 aa13.12□□□□□ -0.31
NOTCH3-203ENST00000595514 FLT3LGP49771 235 aa13.12□□□□□ -0.31
NOTCH3-203ENST00000595514 PPATQ06203 517 aa13.12□□□□□ -0.31
NOTCH3-203ENST00000595514 CHRNDQ07001 517 aa13.12□□□□□ -0.31
NOTCH3-203ENST00000595514 CCDC146Q8IYE0 955 aa13.12□□□□□ -0.31
NOTCH3-203ENST00000595514 MIER1Q8N108 512 aa13.12□□□□□ -0.31
NOTCH3-203ENST00000595514 ANKLE1Q8NAG6 615 aa13.12□□□□□ -0.31
NOTCH3-203ENST00000595514 METTL22Q9BUU2 404 aaPredicted RBP13.12□□□□□ -0.31
NOTCH3-203ENST00000595514 NBPF3Q9H094 633 aa13.12□□□□□ -0.31
NOTCH3-203ENST00000595514 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
NOTCH3-203ENST00000595514 LAMA2P24043 3122 aaKnown RBP13.12□□□□□ -0.31
NOTCH3-203ENST00000595514 BCRP11274 1271 aa13.11□□□□□ -0.31
NOTCH3-203ENST00000595514 IL1R1P14778 569 aa13.11□□□□□ -0.31
NOTCH3-203ENST00000595514 ZNF697Q5TEC3 545 aa13.11□□□□□ -0.31
NOTCH3-203ENST00000595514 DUSP27Q5VZP5 1158 aa13.11□□□□□ -0.31
NOTCH3-203ENST00000595514 DZIP1LQ8IYY4 767 aaKnown RBP13.11□□□□□ -0.31
NOTCH3-203ENST00000595514 SERPINA10Q9UK55 444 aa13.11□□□□□ -0.31
NOTCH3-203ENST00000595514 TAOK2Q9UL54 1235 aa13.11□□□□□ -0.31
NOTCH3-203ENST00000595514 TTF2Q9UNY4 1162 aaKnown RBP13.11□□□□□ -0.31
NOTCH3-203ENST00000595514 DDX58O95786 925 aaKnown RBP13.1□□□□□ -0.31
NOTCH3-203ENST00000595514 ITGA6P23229 1130 aa13.1□□□□□ -0.31
NOTCH3-203ENST00000595514 PLA2G5P39877 138 aa13.1□□□□□ -0.31
NOTCH3-203ENST00000595514 IRF5Q13568 498 aa13.1□□□□□ -0.31
NOTCH3-203ENST00000595514 C15orf52Q6ZUT6 534 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms