RNA–Protein interactions for RNA: ENST00000594461.2

LINC00347-202, long intergenic non-protein coding RNA 347, humanhuman

TSL 1 (best) BASIC

Gene LINC00347, Length 2,371 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-202ENST00000594461 PTGS1P23219 599 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 ATICP31939 592 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 GUCY1B3Q02153 619 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 CCDC57Q2TAC2 916 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 CEP85LQ5SZL2 805 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 NANOGNBQ7Z5D8 188 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 RPAP3Q9H6T3 665 aaPredicted RBP8.39□□□□□ -1.07
LINC00347-202ENST00000594461 L2HGDHQ9H9P8 463 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 SLC39A2Q9NP94 309 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 KLHL42Q9P2K6 505 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 ZMAT5Q9UDW3 170 aaKnown RBP8.39□□□□□ -1.07
LINC00347-202ENST00000594461 SWAP70Q9UH65 585 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 CROTQ9UKG9 612 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 CORO1CQ9ULV4 474 aaPredicted RBP8.39□□□□□ -1.07
LINC00347-202ENST00000594461 CAPN7Q9Y6W3 813 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 EPRSP07814 1512 aaKnown RBP8.39□□□□□ -1.07
LINC00347-202ENST00000594461 TIAM1Q13009 1591 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 RIMBP3CA6NJZ7 1639 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 RIMBP3BA6NNM3 1639 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 RIMBP3Q9UFD9 1639 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 GOLGA6L9A6NEM1 432 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 SEC31AO94979 1220 aaKnown RBP8.39□□□□□ -1.07
LINC00347-202ENST00000594461 PARP1P09874 1014 aaKnown RBP8.39□□□□□ -1.07
LINC00347-202ENST00000594461 NEK2P51955 445 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 ATF7IPQ6VMQ6 1270 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 BRAPQ7Z569 592 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 SPATS2Q86XZ4 545 aaKnown RBP8.39□□□□□ -1.07
LINC00347-202ENST00000594461 CCDC50Q8IVM0 306 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 SLC7A5P1Q8MH63 180 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 GALNT15Q8N3T1 639 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 CCDC82Q8N4S0 544 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 GBP7Q8N8V2 638 aaPredicted RBP8.39□□□□□ -1.07
LINC00347-202ENST00000594461 UIMC1Q96RL1 719 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 YIPF3Q9GZM5 350 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 TUBA8Q9NY65 449 aaPredicted RBP8.39□□□□□ -1.07
LINC00347-202ENST00000594461 WWC3Q9ULE0 1092 aa8.39□□□□□ -1.07
LINC00347-202ENST00000594461 H3BQF6 201 aa8.38□□□□□ -1.07
LINC00347-202ENST00000594461 SRGAP3O43295 1099 aa8.38□□□□□ -1.07
LINC00347-202ENST00000594461 MTRF1O75570 445 aaKnown RBP8.38□□□□□ -1.07
LINC00347-202ENST00000594461 FGFR1OPO95684 399 aaKnown RBP8.38□□□□□ -1.07
LINC00347-202ENST00000594461 FNTAP49354 379 aa8.38□□□□□ -1.07
LINC00347-202ENST00000594461 CC2D1AQ6P1N0 951 aaPredicted RBP8.38□□□□□ -1.07
LINC00347-202ENST00000594461 ARHGAP27Q6ZUM4 889 aa8.38□□□□□ -1.07
LINC00347-202ENST00000594461 LRRC49Q8IUZ0 686 aa8.38□□□□□ -1.07
LINC00347-202ENST00000594461 TRIM58Q8NG06 486 aa8.38□□□□□ -1.07
LINC00347-202ENST00000594461 HOOK2Q96ED9 719 aa8.38□□□□□ -1.07
LINC00347-202ENST00000594461 DHTKD1Q96HY7 919 aaPredicted RBP8.38□□□□□ -1.07
LINC00347-202ENST00000594461 HELLSQ9NRZ9 838 aa8.38□□□□□ -1.07
LINC00347-202ENST00000594461 ZNHIT6Q9NWK9 470 aaKnown RBP8.38□□□□□ -1.07
LINC00347-202ENST00000594461 COMMD8Q9NX08 183 aa8.38□□□□□ -1.07
LINC00347-202ENST00000594461 NSFL1CQ9UNZ2 370 aaKnown RBP8.38□□□□□ -1.07
LINC00347-202ENST00000594461 ATP6V0A2Q9Y487 856 aa8.38□□□□□ -1.07
LINC00347-202ENST00000594461 HECW1Q76N89 1606 aa8.38□□□□□ -1.07
LINC00347-202ENST00000594461 UACAQ9BZF9 1416 aa8.38□□□□□ -1.07
LINC00347-202ENST00000594461 TMEM110-MUSTN1A8MSY1 372 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 EBAG9O00559 213 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 PPFIA3O75145 1194 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 FSBPO95073 299 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 CCDC159P0C7I6 412 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 PSMD7P51665 324 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 DCTN1Q14203 1278 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 UBXN4Q92575 508 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 VTI1AQ96AJ9 217 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 CCDC68Q9H2F9 335 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 LUC7LQ9NQ29 371 aaKnown RBP8.37□□□□□ -1.07
LINC00347-202ENST00000594461 KLC4Q9NSK0 619 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 ITGB1BP2Q9UKP3 347 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 PAIP2BQ9ULR5 123 aaKnown RBP8.37□□□□□ -1.07
LINC00347-202ENST00000594461 PHF24Q9UPV7 400 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 AATKQ6ZMQ8 1374 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 LSM1O15116 133 aaKnown RBP8.37□□□□□ -1.07
LINC00347-202ENST00000594461 SMNDC1O75940 238 aaKnown RBP eCLIP8.37□□□□□ -1.07
LINC00347-202ENST00000594461 CHGAP10645 457 aaKnown RBP8.37□□□□□ -1.07
LINC00347-202ENST00000594461 MATR3P43243 847 aaKnown RBP eCLIP8.37□□□□□ -1.07
LINC00347-202ENST00000594461 MCM2P49736 904 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 DMPKQ09013 629 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 CCDC158Q5M9N0 1113 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 AGAP9Q5VTM2 703 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 NEK10Q6ZWH5 1172 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 ARHGEF25Q86VW2 580 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 CEP57Q86XR8 500 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 TSC22D3Q99576 134 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 FUT8Q9BYC5 575 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 ARFGAP3Q9NP61 516 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 C6orf203Q9P0P8 240 aaPredicted RBP8.37□□□□□ -1.07
LINC00347-202ENST00000594461 ABCA8O94911 1581 aa8.37□□□□□ -1.07
LINC00347-202ENST00000594461 B4DLN1 442 aa8.36□□□□□ -1.07
LINC00347-202ENST00000594461 GNAT1P11488 350 aa8.36□□□□□ -1.07
LINC00347-202ENST00000594461 EIF4A2Q14240 407 aaKnown RBP8.36□□□□□ -1.07
LINC00347-202ENST00000594461 EMC10Q5UCC4 262 aa8.36□□□□□ -1.07
LINC00347-202ENST00000594461 LMOD2Q6P5Q4 547 aa8.36□□□□□ -1.07
LINC00347-202ENST00000594461 HPS3Q969F9 1004 aa8.36□□□□□ -1.07
LINC00347-202ENST00000594461 VMP1Q96GC9 406 aa8.36□□□□□ -1.07
LINC00347-202ENST00000594461 MAP3K20Q9NYL2 800 aaKnown RBP8.36□□□□□ -1.07
LINC00347-202ENST00000594461 PRELID1Q9Y255 219 aa8.36□□□□□ -1.07
LINC00347-202ENST00000594461 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.36□□□□□ -1.07
LINC00347-202ENST00000594461 BZW2Q9Y6E2 419 aaKnown RBP8.36□□□□□ -1.07
LINC00347-202ENST00000594461 ATXN2Q99700 1313 aaKnown RBP8.36□□□□□ -1.07
LINC00347-202ENST00000594461 ATP10BO94823 1461 aa8.36□□□□□ -1.07
LINC00347-202ENST00000594461 LRRC9Q6ZRR7 1453 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms