RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 UQCRHLA0A096LP55 91 aa16.78■□□□□ 0.28
RANBP3-229ENST00000592771 FGAP02671 866 aa16.78■□□□□ 0.28
RANBP3-229ENST00000592771 UQCRHP07919 91 aa16.78■□□□□ 0.28
RANBP3-229ENST00000592771 PRIMPOLQ96LW4 560 aa16.78■□□□□ 0.28
RANBP3-229ENST00000592771 BSDC1Q9NW68 430 aaPredicted RBP16.78■□□□□ 0.28
RANBP3-229ENST00000592771 VPS37CA5D8V6 355 aaPredicted RBP16.77■□□□□ 0.28
RANBP3-229ENST00000592771 ZPR1O75312 459 aa16.77■□□□□ 0.28
RANBP3-229ENST00000592771 AMIGO3Q86WK7 504 aa16.77■□□□□ 0.28
RANBP3-229ENST00000592771 ANKRD18AQ8IVF6 992 aa16.77■□□□□ 0.28
RANBP3-229ENST00000592771 WWC3Q9ULE0 1092 aa16.77■□□□□ 0.28
RANBP3-229ENST00000592771 ZNF804BA4D1E1 1349 aa16.77■□□□□ 0.27
RANBP3-229ENST00000592771 IDH1O75874 414 aaKnown RBP16.76■□□□□ 0.27
RANBP3-229ENST00000592771 HMGN5P82970 282 aaKnown RBP16.76■□□□□ 0.27
RANBP3-229ENST00000592771 ARHGEF1Q92888 912 aaKnown RBP16.76■□□□□ 0.27
RANBP3-229ENST00000592771 SETDB2Q96T68 719 aa16.76■□□□□ 0.27
RANBP3-229ENST00000592771 BCL11BQ9C0K0 894 aaPredicted RBP16.76■□□□□ 0.27
RANBP3-229ENST00000592771 ZNF532Q9HCE3 1301 aa16.76■□□□□ 0.27
RANBP3-229ENST00000592771 PFKFB2O60825 505 aa16.76■□□□□ 0.27
RANBP3-229ENST00000592771 IMMTQ16891 758 aaKnown RBP16.76■□□□□ 0.27
RANBP3-229ENST00000592771 BICDL1Q6ZP65 573 aa16.76■□□□□ 0.27
RANBP3-229ENST00000592771 BRF1Q92994 677 aa16.76■□□□□ 0.27
RANBP3-229ENST00000592771 GOLGA6L6A8MZA4 724 aa16.75■□□□□ 0.27
RANBP3-229ENST00000592771 BCAMP50895 628 aa16.75■□□□□ 0.27
RANBP3-229ENST00000592771 EVCP57679 992 aa16.75■□□□□ 0.27
RANBP3-229ENST00000592771 UBE4AQ14139 1066 aa16.75■□□□□ 0.27
RANBP3-229ENST00000592771 SPTLC3Q9NUV7 552 aa16.75■□□□□ 0.27
RANBP3-229ENST00000592771 LRRC2Q9BYS8 371 aa16.74■□□□□ 0.27
RANBP3-229ENST00000592771 DDX19AQ9NUU7 478 aaKnown RBP16.74■□□□□ 0.27
RANBP3-229ENST00000592771 ZMYM6O95789 1325 aa16.74■□□□□ 0.27
RANBP3-229ENST00000592771 UBR3Q6ZT12 1888 aa16.74■□□□□ 0.27
RANBP3-229ENST00000592771 MAP3K12Q12852 859 aa16.74■□□□□ 0.27
RANBP3-229ENST00000592771 NOLC1Q14978 699 aaKnown RBP eCLIP16.74■□□□□ 0.27
RANBP3-229ENST00000592771 ALX1Q15699 326 aa16.74■□□□□ 0.27
RANBP3-229ENST00000592771 MAP3K11Q16584 847 aa16.74■□□□□ 0.27
RANBP3-229ENST00000592771 GIMAP6Q6P9H5 292 aa16.74■□□□□ 0.27
RANBP3-229ENST00000592771 NBPF5PQ86XG9 351 aaPredicted RBP16.74■□□□□ 0.27
RANBP3-229ENST00000592771 MB21D2Q8IYB1 491 aaPredicted RBP16.74■□□□□ 0.27
RANBP3-229ENST00000592771 SMARCC2Q8TAQ2 1214 aa16.74■□□□□ 0.27
RANBP3-229ENST00000592771 STRBPQ96SI9 672 aaKnown RBP16.74■□□□□ 0.27
RANBP3-229ENST00000592771 LLPHQ9BRT6 129 aaKnown RBP16.74■□□□□ 0.27
RANBP3-229ENST00000592771 MINPP1Q9UNW1 487 aa16.74■□□□□ 0.27
RANBP3-229ENST00000592771 WDR19Q8NEZ3 1342 aa16.74■□□□□ 0.27
RANBP3-229ENST00000592771 GTF2E1P29083 439 aaPredicted RBP16.73■□□□□ 0.27
RANBP3-229ENST00000592771 STK3Q13188 491 aa16.73■□□□□ 0.27
RANBP3-229ENST00000592771 TPTE2Q6XPS3 522 aa16.73■□□□□ 0.27
RANBP3-229ENST00000592771 TTC6Q86TZ1 520 aa16.73■□□□□ 0.27
RANBP3-229ENST00000592771 FAM200AQ8TCP9 573 aa16.73■□□□□ 0.27
RANBP3-229ENST00000592771 NLRP3Q96P20 1036 aa16.73■□□□□ 0.27
RANBP3-229ENST00000592771 NUP62CLQ9H1M0 184 aa16.73■□□□□ 0.27
RANBP3-229ENST00000592771 DTNBO60941 627 aa16.72■□□□□ 0.27
RANBP3-229ENST00000592771 CAVIN2O95810 425 aa16.72■□□□□ 0.27
RANBP3-229ENST00000592771 ADRA2BP18089 450 aa16.72■□□□□ 0.27
RANBP3-229ENST00000592771 SCRN1Q12765 414 aa16.72■□□□□ 0.27
RANBP3-229ENST00000592771 RBM43Q6ZSC3 357 aaKnown RBP16.72■□□□□ 0.27
RANBP3-229ENST00000592771 MYRIPQ8NFW9 859 aa16.72■□□□□ 0.27
RANBP3-229ENST00000592771 CELF1Q92879 486 aaKnown RBP16.72■□□□□ 0.27
RANBP3-229ENST00000592771 ZNF274Q96GC6 653 aaPredicted RBP16.72■□□□□ 0.27
RANBP3-229ENST00000592771 TNRC6CQ9HCJ0 1690 aaKnown RBP16.72■□□□□ 0.27
RANBP3-229ENST00000592771 HAND2P61296 217 aa16.72■□□□□ 0.27
RANBP3-229ENST00000592771 FAM196AQ6ZSG2 479 aa16.72■□□□□ 0.27
RANBP3-229ENST00000592771 NBPF3Q9H094 633 aa16.72■□□□□ 0.27
RANBP3-229ENST00000592771 LRRC4BQ9NT99 713 aa16.72■□□□□ 0.27
RANBP3-229ENST00000592771 BRWD3Q6RI45 1802 aa16.71■□□□□ 0.27
RANBP3-229ENST00000592771 ZNF213O14771 459 aa16.71■□□□□ 0.27
RANBP3-229ENST00000592771 JAK2O60674 1132 aa16.71■□□□□ 0.27
RANBP3-229ENST00000592771 FGD1P98174 961 aa16.71■□□□□ 0.27
RANBP3-229ENST00000592771 APOBRQ0VD83 1088 aa16.71■□□□□ 0.27
RANBP3-229ENST00000592771 TRAPPC3LQ5T215 181 aa16.71■□□□□ 0.27
RANBP3-229ENST00000592771 CDC37L1Q7L3B6 337 aa16.71■□□□□ 0.27
RANBP3-229ENST00000592771 MAGEB6Q8N7X4 407 aa16.71■□□□□ 0.27
RANBP3-229ENST00000592771 CHMP4CQ96CF2 233 aa16.71■□□□□ 0.27
RANBP3-229ENST00000592771 ZSCAN16Q9H4T2 348 aaPredicted RBP16.71■□□□□ 0.27
RANBP3-229ENST00000592771 COL1A1P02452 1464 aaPredicted RBP16.71■□□□□ 0.26
RANBP3-229ENST00000592771 CARMIL3Q8ND23 1372 aa16.71■□□□□ 0.26
RANBP3-229ENST00000592771 GOLGA6L4A6NEF3 574 aa16.7■□□□□ 0.26
RANBP3-229ENST00000592771 GTF2F1P35269 517 aaKnown RBP eCLIP16.7■□□□□ 0.261e-15■■■■■ 63.3
RANBP3-229ENST00000592771 RPS8P62241 208 aaKnown RBP16.7■□□□□ 0.26
RANBP3-229ENST00000592771 NCOA7Q8NI08 942 aa16.7■□□□□ 0.26
RANBP3-229ENST00000592771 TIAM2Q8IVF5 1701 aa16.7■□□□□ 0.26
RANBP3-229ENST00000592771 PNPLA7Q6ZV29 1317 aa16.7■□□□□ 0.26
RANBP3-229ENST00000592771 ZBTB22O15209 634 aa16.7■□□□□ 0.26
RANBP3-229ENST00000592771 PDIA3P30101 505 aaKnown RBP16.7■□□□□ 0.26
RANBP3-229ENST00000592771 TM4SF1P30408 202 aa16.7■□□□□ 0.26
RANBP3-229ENST00000592771 RFC4P35249 363 aa16.7■□□□□ 0.26
RANBP3-229ENST00000592771 ANTXR2P58335 489 aa16.7■□□□□ 0.26
RANBP3-229ENST00000592771 NSUN7Q8NE18 718 aaKnown RBP16.7■□□□□ 0.26
RANBP3-229ENST00000592771 AIDAQ96BJ3 306 aa16.7■□□□□ 0.26
RANBP3-229ENST00000592771 SPATA32Q96LK8 384 aa16.7■□□□□ 0.26
RANBP3-229ENST00000592771 SALL1Q9NSC2 1324 aa16.69■□□□□ 0.26
RANBP3-229ENST00000592771 CTDNEP1O95476 244 aa16.69■□□□□ 0.26
RANBP3-229ENST00000592771 DNTTIP2Q5QJE6 756 aaKnown RBP16.69■□□□□ 0.26
RANBP3-229ENST00000592771 GNL3LQ9NVN8 582 aaKnown RBP16.69■□□□□ 0.26
RANBP3-229ENST00000592771 EP400Q96L91 3159 aa16.69■□□□□ 0.26
RANBP3-229ENST00000592771 CHD4Q14839 1912 aa16.69■□□□□ 0.26
RANBP3-229ENST00000592771 CACNA1SQ13698 1873 aa16.69■□□□□ 0.26
RANBP3-229ENST00000592771 PATL2C9JE40 543 aaKnown RBP16.68■□□□□ 0.26
RANBP3-229ENST00000592771 PRC1O43663 620 aa16.68■□□□□ 0.26
RANBP3-229ENST00000592771 MBD4O95243 580 aa16.68■□□□□ 0.26
RANBP3-229ENST00000592771 TBC1D10CQ8IV04 446 aa16.68■□□□□ 0.26
RANBP3-229ENST00000592771 LEO1Q8WVC0 666 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms