RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 LCE2BO14633 110 aa6.95□□□□□ -1.3
ERCC1-216ENST00000592444 ZBTB48P10074 688 aaPredicted RBP6.95□□□□□ -1.3
ERCC1-216ENST00000592444 RPS12P25398 132 aaKnown RBP6.95□□□□□ -1.3
ERCC1-216ENST00000592444 NF2P35240 595 aa6.95□□□□□ -1.3
ERCC1-216ENST00000592444 PRMT2P55345 433 aa6.95□□□□□ -1.3
ERCC1-216ENST00000592444 UBXN2AP68543 259 aa6.95□□□□□ -1.3
ERCC1-216ENST00000592444 KIF22Q14807 665 aa6.95□□□□□ -1.3
ERCC1-216ENST00000592444 LDLRAD1Q5T700 205 aa6.95□□□□□ -1.3
ERCC1-216ENST00000592444 ZNF787Q6DD87 383 aa6.95□□□□□ -1.3
ERCC1-216ENST00000592444 ARMC9Q7Z3E5 817 aa6.95□□□□□ -1.3
ERCC1-216ENST00000592444 RPGRQ92834 1020 aaKnown RBP6.95□□□□□ -1.3
ERCC1-216ENST00000592444 TATDN2Q93075 761 aa6.95□□□□□ -1.3
ERCC1-216ENST00000592444 WNK4Q96J92 1243 aa6.95□□□□□ -1.3
ERCC1-216ENST00000592444 FBXL18Q96ME1 805 aa6.95□□□□□ -1.3
ERCC1-216ENST00000592444 PHOX2BQ99453 314 aa6.95□□□□□ -1.3
ERCC1-216ENST00000592444 RTFDC1Q9BY42 306 aaPredicted RBP6.95□□□□□ -1.3
ERCC1-216ENST00000592444 TMX4Q9H1E5 349 aaPredicted RBP6.95□□□□□ -1.3
ERCC1-216ENST00000592444 IL21Q9HBE4 155 aa6.95□□□□□ -1.3
ERCC1-216ENST00000592444 PNMA3Q9UL41 463 aa6.95□□□□□ -1.3
ERCC1-216ENST00000592444 FAM205AQ6ZU69 1335 aa6.95□□□□□ -1.3
ERCC1-216ENST00000592444 CFAP47Q6ZTR5 3102 aa6.94□□□□□ -1.3
ERCC1-216ENST00000592444 TAF1P21675 1872 aa6.94□□□□□ -1.3
ERCC1-216ENST00000592444 STARD3NLO95772 234 aa6.94□□□□□ -1.3
ERCC1-216ENST00000592444 BMP1P13497 986 aa6.94□□□□□ -1.3
ERCC1-216ENST00000592444 GTF2E1P29083 439 aaPredicted RBP6.94□□□□□ -1.3
ERCC1-216ENST00000592444 HOXA10P31260 410 aaPredicted RBP6.94□□□□□ -1.3
ERCC1-216ENST00000592444 RAET1EQ8TD07 263 aa6.94□□□□□ -1.3
ERCC1-216ENST00000592444 TRIM47Q96LD4 638 aa6.94□□□□□ -1.3
ERCC1-216ENST00000592444 ANGEL1Q9UNK9 670 aaKnown RBP6.94□□□□□ -1.3
ERCC1-216ENST00000592444 FZD1Q9UP38 647 aa6.94□□□□□ -1.3
ERCC1-216ENST00000592444 GNRH1P01148 92 aa6.93□□□□□ -1.3
ERCC1-216ENST00000592444 ITGB8P26012 769 aa6.93□□□□□ -1.3
ERCC1-216ENST00000592444 IL6STP40189 918 aaPredicted RBP6.93□□□□□ -1.3
ERCC1-216ENST00000592444 LACTBP83111 547 aaPredicted RBP6.93□□□□□ -1.3
ERCC1-216ENST00000592444 GRIN2CQ14957 1233 aa6.93□□□□□ -1.3
ERCC1-216ENST00000592444 TAF1CQ15572 869 aaPredicted RBP6.93□□□□□ -1.3
ERCC1-216ENST00000592444 PLEKHO1Q53GL0 409 aaPredicted RBP6.93□□□□□ -1.3
ERCC1-216ENST00000592444 PPP1R18Q6NYC8 613 aa6.93□□□□□ -1.3
ERCC1-216ENST00000592444 DPP8Q6V1X1 898 aaPredicted RBP6.93□□□□□ -1.3
ERCC1-216ENST00000592444 NPM2Q86SE8 214 aaKnown RBP6.93□□□□□ -1.3
ERCC1-216ENST00000592444 CLMNQ96JQ2 1002 aa6.93□□□□□ -1.3
ERCC1-216ENST00000592444 DEFB118Q96PH6 123 aa6.93□□□□□ -1.3
ERCC1-216ENST00000592444 GGNBP2Q9H3C7 697 aa6.93□□□□□ -1.3
ERCC1-216ENST00000592444 CDHR5Q9HBB8 845 aa6.93□□□□□ -1.3
ERCC1-216ENST00000592444 ZFYVE28Q9HCC9 887 aa6.93□□□□□ -1.3
ERCC1-216ENST00000592444 KCNQ5Q9NR82 932 aa6.93□□□□□ -1.3
ERCC1-216ENST00000592444 SRRDQ9UH36 339 aa6.93□□□□□ -1.3
ERCC1-216ENST00000592444 EMILIN1Q9Y6C2 1016 aa6.93□□□□□ -1.3
ERCC1-216ENST00000592444 DCHS1Q96JQ0 3298 aa6.93□□□□□ -1.3
ERCC1-216ENST00000592444 SETXQ7Z333 2677 aaKnown RBP6.92□□□□□ -1.3
ERCC1-216ENST00000592444 PPM1GO15355 546 aaPredicted RBP6.92□□□□□ -1.3
ERCC1-216ENST00000592444 GJA5P36382 358 aa6.92□□□□□ -1.3
ERCC1-216ENST00000592444 ERMP1Q7Z2K6 904 aa6.92□□□□□ -1.3
ERCC1-216ENST00000592444 DZIP3Q86Y13 1208 aaKnown RBP6.92□□□□□ -1.3
ERCC1-216ENST00000592444 VSIG10Q8N0Z9 540 aa6.92□□□□□ -1.3
ERCC1-216ENST00000592444 RBM17Q96I25 401 aaKnown RBP6.92□□□□□ -1.3
ERCC1-216ENST00000592444 UIMC1Q96RL1 719 aa6.92□□□□□ -1.3
ERCC1-216ENST00000592444 CRAMP1Q96RY5 1269 aa6.92□□□□□ -1.3
ERCC1-216ENST00000592444 MTRQ99707 1265 aa6.92□□□□□ -1.3
ERCC1-216ENST00000592444 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.92□□□□□ -1.3
ERCC1-216ENST00000592444 NIP7Q9Y221 180 aaKnown RBP eCLIP6.92□□□□□ -1.3
ERCC1-216ENST00000592444 ATP6V0A2Q9Y487 856 aa6.92□□□□□ -1.3
ERCC1-216ENST00000592444 CHD6Q8TD26 2715 aa6.91□□□□□ -1.3
ERCC1-216ENST00000592444 TESPA1A2RU30 521 aaPredicted RBP6.91□□□□□ -1.3
ERCC1-216ENST00000592444 PRR33A8MZF0 331 aa6.91□□□□□ -1.3
ERCC1-216ENST00000592444 CAPN2P17655 700 aa6.91□□□□□ -1.3
ERCC1-216ENST00000592444 GGCXP38435 758 aa6.91□□□□□ -1.3
ERCC1-216ENST00000592444 TNNT2P45379 298 aaPredicted RBP6.91□□□□□ -1.3
ERCC1-216ENST00000592444 SMAD3P84022 425 aaKnown RBP6.91□□□□□ -1.3
ERCC1-216ENST00000592444 TRIM26Q12899 539 aaPredicted RBP6.91□□□□□ -1.3
ERCC1-216ENST00000592444 CCDC85BQ15834 202 aaPredicted RBP6.91□□□□□ -1.3
ERCC1-216ENST00000592444 C1orf141Q5JVX7 400 aa6.91□□□□□ -1.3
ERCC1-216ENST00000592444 CLEC4GQ6UXB4 293 aa6.91□□□□□ -1.3
ERCC1-216ENST00000592444 NUDT18Q6ZVK8 323 aa6.91□□□□□ -1.3
ERCC1-216ENST00000592444 PPARGC1BQ86YN6 1023 aaKnown RBP6.91□□□□□ -1.3
ERCC1-216ENST00000592444 TTC13Q8NBP0 860 aa6.91□□□□□ -1.3
ERCC1-216ENST00000592444 DBNDD1Q9H9R9 158 aa6.91□□□□□ -1.3
ERCC1-216ENST00000592444 RTL9Q8NET4 1388 aa6.91□□□□□ -1.3
ERCC1-216ENST00000592444 ABCC12Q96J65 1359 aa6.91□□□□□ -1.3
ERCC1-216ENST00000592444 CTGFP29279 349 aa6.9□□□□□ -1.3
ERCC1-216ENST00000592444 PDE3AQ14432 1141 aa6.9□□□□□ -1.3
ERCC1-216ENST00000592444 ZNF496Q96IT1 587 aaPredicted RBP6.9□□□□□ -1.3
ERCC1-216ENST00000592444 SLC52A2Q9HAB3 445 aa6.9□□□□□ -1.3
ERCC1-216ENST00000592444 REV3LO60673 3130 aa6.9□□□□□ -1.3
ERCC1-216ENST00000592444 LAMB1P07942 1786 aa6.9□□□□□ -1.31
ERCC1-216ENST00000592444 ANKRD11Q6UB99 2663 aaPredicted RBP6.89□□□□□ -1.31
ERCC1-216ENST00000592444 TRANK1O15050 2925 aa6.89□□□□□ -1.31
ERCC1-216ENST00000592444 FYB1O15117 783 aa6.89□□□□□ -1.31
ERCC1-216ENST00000592444 RNF40O75150 1001 aa6.89□□□□□ -1.31
ERCC1-216ENST00000592444 A1BGP04217 495 aa6.89□□□□□ -1.31
ERCC1-216ENST00000592444 PSMC4P43686 418 aa6.89□□□□□ -1.31
ERCC1-216ENST00000592444 KCNQ1P51787 676 aa6.89□□□□□ -1.31
ERCC1-216ENST00000592444 ZNF280AP59817 542 aaPredicted RBP6.89□□□□□ -1.31
ERCC1-216ENST00000592444 TFF2Q03403 129 aa6.89□□□□□ -1.31
ERCC1-216ENST00000592444 SHHQ15465 462 aa6.89□□□□□ -1.31
ERCC1-216ENST00000592444 NECTIN2Q92692 538 aa6.89□□□□□ -1.31
ERCC1-216ENST00000592444 LBHD1Q9BQE6 289 aaPredicted RBP6.89□□□□□ -1.31
ERCC1-216ENST00000592444 KCNH6Q9H252 994 aa6.89□□□□□ -1.31
ERCC1-216ENST00000592444 C11orf49Q9H6J7 331 aa6.89□□□□□ -1.31
ERCC1-216ENST00000592444 MYOZ2Q9NPC6 264 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms