RNA–Protein interactions for RNA: ENST00000592410.5

ERCC1-215, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-215ENST00000592410 PRR14Q9BWN1 585 aa6.79□□□□□ -1.32
ERCC1-215ENST00000592410 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.79□□□□□ -1.32
ERCC1-215ENST00000592410 HELLSQ9NRZ9 838 aa6.79□□□□□ -1.32
ERCC1-215ENST00000592410 PAG1Q9NWQ8 432 aa6.79□□□□□ -1.32
ERCC1-215ENST00000592410 NIP7Q9Y221 180 aaKnown RBP eCLIP6.79□□□□□ -1.32
ERCC1-215ENST00000592410 MED23Q9ULK4 1368 aa6.79□□□□□ -1.32
ERCC1-215ENST00000592410 UBN2Q6ZU65 1347 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 KCNQ2O43526 872 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 ZPR1O75312 459 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 RPS6KA4O75676 772 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 PDE8BO95263 885 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 CD2BP2O95400 341 aaKnown RBP6.78□□□□□ -1.32
ERCC1-215ENST00000592410 UQCRFS1P1P0C7P4 283 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 SLC5A1P13866 664 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 DNAJB2P25686 324 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 HSPA1LP34931 641 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 DDIT3P35638 169 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 GGCXP38435 758 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 TIMM10P62072 90 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 RAB3GAP1Q15042 981 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 TTF1Q15361 905 aaPredicted RBP6.78□□□□□ -1.32
ERCC1-215ENST00000592410 PUM3Q15397 648 aaKnown RBP6.78□□□□□ -1.32
ERCC1-215ENST00000592410 VPS53Q5VIR6 699 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 SUSD4Q5VX71 490 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 KCNB2Q92953 911 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 CHMP4CQ96CF2 233 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 XAGE2Q96GT9 111 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 ZSCAN31Q96LW9 406 aaPredicted RBP6.78□□□□□ -1.32
ERCC1-215ENST00000592410 MPHOSPH8Q99549 860 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 PUS3Q9BZE2 481 aaKnown RBP6.78□□□□□ -1.32
ERCC1-215ENST00000592410 GREM2Q9H772 168 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 CCNL1Q9UK58 526 aaPredicted RBP6.78□□□□□ -1.32
ERCC1-215ENST00000592410 PALD1Q9ULE6 856 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 RTCBQ9Y3I0 505 aaKnown RBP6.78□□□□□ -1.32
ERCC1-215ENST00000592410 RIPOR2Q9Y4F9 1068 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.78□□□□□ -1.32
ERCC1-215ENST00000592410 RBM8AQ9Y5S9 174 aaKnown RBP6.78□□□□□ -1.32
ERCC1-215ENST00000592410 SNX14Q9Y5W7 946 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 CYP46A1Q9Y6A2 500 aa6.78□□□□□ -1.32
ERCC1-215ENST00000592410 RIC1Q4ADV7 1423 aa6.77□□□□□ -1.33
ERCC1-215ENST00000592410 COL24A1Q17RW2 1714 aa6.77□□□□□ -1.33
ERCC1-215ENST00000592410 GOLIM4O00461 696 aa6.77□□□□□ -1.33
ERCC1-215ENST00000592410 NRG2O14511 850 aaPredicted RBP6.77□□□□□ -1.33
ERCC1-215ENST00000592410 RNF113AO15541 343 aaKnown RBP6.77□□□□□ -1.33
ERCC1-215ENST00000592410 FRAT2O75474 233 aaPredicted RBP6.77□□□□□ -1.33
ERCC1-215ENST00000592410 NTSR2O95665 410 aa6.77□□□□□ -1.33
ERCC1-215ENST00000592410 GTF2E1P29083 439 aaPredicted RBP6.77□□□□□ -1.33
ERCC1-215ENST00000592410 MCM4P33991 863 aa6.77□□□□□ -1.33
ERCC1-215ENST00000592410 CUL4AQ13619 759 aa6.77□□□□□ -1.33
ERCC1-215ENST00000592410 NECTIN1Q15223 517 aa6.77□□□□□ -1.33
ERCC1-215ENST00000592410 SKOR2Q2VWA4 1001 aaPredicted RBP6.77□□□□□ -1.33
ERCC1-215ENST00000592410 CREB3L3Q68CJ9 461 aa6.77□□□□□ -1.33
ERCC1-215ENST00000592410 TRAF7Q6Q0C0 670 aa6.77□□□□□ -1.33
ERCC1-215ENST00000592410 DDX46Q7L014 1031 aaKnown RBP6.77□□□□□ -1.33
ERCC1-215ENST00000592410 LINC00116Q8NCU8 138 aa6.77□□□□□ -1.33
ERCC1-215ENST00000592410 RBM46Q8TBY0 533 aaKnown RBP6.77□□□□□ -1.33
ERCC1-215ENST00000592410 LPIN2Q92539 896 aa6.77□□□□□ -1.33
ERCC1-215ENST00000592410 TMX3Q96JJ7 454 aa6.77□□□□□ -1.33
ERCC1-215ENST00000592410 FAM227BQ96M60 508 aa6.77□□□□□ -1.33
ERCC1-215ENST00000592410 CCDC85AQ96PX6 553 aaPredicted RBP6.77□□□□□ -1.33
ERCC1-215ENST00000592410 DSCC1Q9BVC3 393 aa6.77□□□□□ -1.33
ERCC1-215ENST00000592410 TMUB1Q9BVT8 246 aa6.77□□□□□ -1.33
ERCC1-215ENST00000592410 SH2B1Q9NRF2 756 aaPredicted RBP6.77□□□□□ -1.33
ERCC1-215ENST00000592410 NARFQ9UHQ1 456 aa6.77□□□□□ -1.33
ERCC1-215ENST00000592410 LIMCH1Q9UPQ0 1083 aa6.77□□□□□ -1.33
ERCC1-215ENST00000592410 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.77□□□□□ -1.33
ERCC1-215ENST00000592410 CASZ1Q86V15 1759 aa6.77□□□□□ -1.33
ERCC1-215ENST00000592410 C4BP0C0L5 1744 aa6.76□□□□□ -1.33
ERCC1-215ENST00000592410 A0A0D9SFI3 127 aa6.76□□□□□ -1.33
ERCC1-215ENST00000592410 LCE2BO14633 110 aa6.76□□□□□ -1.33
ERCC1-215ENST00000592410 SLC27A2O14975 620 aa6.76□□□□□ -1.33
ERCC1-215ENST00000592410 TAF5LO75529 589 aa6.76□□□□□ -1.33
ERCC1-215ENST00000592410 HMGB1P09429 215 aaKnown RBP6.76□□□□□ -1.33
ERCC1-215ENST00000592410 CASTP20810 708 aaKnown RBP6.76□□□□□ -1.33
ERCC1-215ENST00000592410 FKBP4Q02790 459 aaKnown RBP eCLIP6.76□□□□□ -1.33
ERCC1-215ENST00000592410 PTH1RQ03431 593 aa6.76□□□□□ -1.33
ERCC1-215ENST00000592410 TSGA10IPQ3SY00 556 aa6.76□□□□□ -1.33
ERCC1-215ENST00000592410 ZMYM1Q5SVZ6 1142 aa6.76□□□□□ -1.33
ERCC1-215ENST00000592410 PRPF40BQ6NWY9 871 aaKnown RBP6.76□□□□□ -1.33
ERCC1-215ENST00000592410 BLOC1S2Q6QNY1 142 aa6.76□□□□□ -1.33
ERCC1-215ENST00000592410 FAM196AQ6ZSG2 479 aa6.76□□□□□ -1.33
ERCC1-215ENST00000592410 RUFY3Q7L099 469 aa6.76□□□□□ -1.33
ERCC1-215ENST00000592410 SEPT12Q8IYM1 358 aa6.76□□□□□ -1.33
ERCC1-215ENST00000592410 JAKMIP1Q96N16 626 aaKnown RBP6.76□□□□□ -1.33
ERCC1-215ENST00000592410 SETDB2Q96T68 719 aa6.76□□□□□ -1.33
ERCC1-215ENST00000592410 IL25Q9H293 177 aa6.76□□□□□ -1.33
ERCC1-215ENST00000592410 PDRG1Q9NUG6 133 aa6.76□□□□□ -1.33
ERCC1-215ENST00000592410 CTNNA3Q9UI47 895 aa6.76□□□□□ -1.33
ERCC1-215ENST00000592410 PCDHB3Q9Y5E6 796 aa6.76□□□□□ -1.33
ERCC1-215ENST00000592410 ADGRG1Q9Y653 693 aa6.76□□□□□ -1.33
ERCC1-215ENST00000592410 RPAP1Q9BWH6 1393 aaPredicted RBP6.75□□□□□ -1.33
ERCC1-215ENST00000592410 FAM177BA6PVY3 158 aa6.75□□□□□ -1.33
ERCC1-215ENST00000592410 GNPATO15228 680 aa6.75□□□□□ -1.33
ERCC1-215ENST00000592410 HCLS1P14317 486 aaPredicted RBP6.75□□□□□ -1.33
ERCC1-215ENST00000592410 ARID4AP29374 1257 aaPredicted RBP6.75□□□□□ -1.33
ERCC1-215ENST00000592410 RFC4P35249 363 aa6.75□□□□□ -1.33
ERCC1-215ENST00000592410 SF3B3Q15393 1217 aaKnown RBP6.75□□□□□ -1.33
ERCC1-215ENST00000592410 SLC27A3Q5K4L6 730 aa6.75□□□□□ -1.33
ERCC1-215ENST00000592410 SLC10A5Q5PT55 438 aa6.75□□□□□ -1.33
ERCC1-215ENST00000592410 TRAPPC3LQ5T215 181 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms