RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 FOSBP53539 338 aa23.13■■□□□ 1.29
MBD3-209ENST00000592012 TBC1D9BQ66K14 1250 aa23.13■■□□□ 1.29
MBD3-209ENST00000592012 ANKRD18AQ8IVF6 992 aa23.13■■□□□ 1.29
MBD3-209ENST00000592012 PGBD1Q96JS3 809 aa23.13■■□□□ 1.29
MBD3-209ENST00000592012 ZMYM6O95789 1325 aa23.13■■□□□ 1.29
MBD3-209ENST00000592012 DHX16O60231 1041 aaKnown RBP23.13■■□□□ 1.29
MBD3-209ENST00000592012 MBD4O95243 580 aa23.13■■□□□ 1.29
MBD3-209ENST00000592012 HS1BP3Q53T59 392 aa23.13■■□□□ 1.29
MBD3-209ENST00000592012 SLC10A5Q5PT55 438 aa23.13■■□□□ 1.29
MBD3-209ENST00000592012 BICDL1Q6ZP65 573 aa23.13■■□□□ 1.29
MBD3-209ENST00000592012 IFNL3Q8IZI9 196 aa23.13■■□□□ 1.29
MBD3-209ENST00000592012 GOLGA8BA8MQT2 603 aa23.12■■□□□ 1.29
MBD3-209ENST00000592012 UVSSAQ2YD98 709 aa23.12■■□□□ 1.29
MBD3-209ENST00000592012 CYB5R4Q7L1T6 521 aa23.12■■□□□ 1.29
MBD3-209ENST00000592012 EPB41L4AQ9HCS5 686 aaPredicted RBP23.12■■□□□ 1.29
MBD3-209ENST00000592012 BSDC1Q9NW68 430 aaPredicted RBP23.12■■□□□ 1.29
MBD3-209ENST00000592012 TAF1P21675 1872 aa23.12■■□□□ 1.29
MBD3-209ENST00000592012 NARFQ9UHQ1 456 aa23.12■■□□□ 1.29
MBD3-209ENST00000592012 RPS6KA4O75676 772 aa23.11■■□□□ 1.29
MBD3-209ENST00000592012 ARMT1Q9H993 441 aa23.11■■□□□ 1.29
MBD3-209ENST00000592012 USP21Q9UK80 565 aa23.11■■□□□ 1.29
MBD3-209ENST00000592012 ANGEL1Q9UNK9 670 aaKnown RBP23.11■■□□□ 1.29
MBD3-209ENST00000592012 ZNF804BA4D1E1 1349 aa23.11■■□□□ 1.29
MBD3-209ENST00000592012 MYH15Q9Y2K3 1946 aa23.1■■□□□ 1.29
MBD3-209ENST00000592012 WTIPA6NIX2 430 aaPredicted RBP23.1■■□□□ 1.29
MBD3-209ENST00000592012 GSG1L2A8MUP6 293 aa23.1■■□□□ 1.29
MBD3-209ENST00000592012 DACT1Q9NYF0 836 aa23.1■■□□□ 1.29
MBD3-209ENST00000592012 B4E1Z4 1266 aa23.09■■□□□ 1.29
MBD3-209ENST00000592012 GTF2E1P29083 439 aaPredicted RBP23.09■■□□□ 1.29
MBD3-209ENST00000592012 GUCY1B3Q02153 619 aa23.09■■□□□ 1.29
MBD3-209ENST00000592012 UBE4AQ14139 1066 aa23.09■■□□□ 1.29
MBD3-209ENST00000592012 NAPBQ9H115 298 aa23.09■■□□□ 1.29
MBD3-209ENST00000592012 NUP62CLQ9H1M0 184 aa23.09■■□□□ 1.29
MBD3-209ENST00000592012 RCOR1Q9UKL0 485 aa23.09■■□□□ 1.29
MBD3-209ENST00000592012 MINPP1Q9UNW1 487 aa23.09■■□□□ 1.29
MBD3-209ENST00000592012 SH2B2O14492 632 aaPredicted RBP23.09■■□□□ 1.29
MBD3-209ENST00000592012 ILDR1Q86SU0 546 aaPredicted RBP23.09■■□□□ 1.29
MBD3-209ENST00000592012 ZSCAN30Q86W11 494 aa23.09■■□□□ 1.29
MBD3-209ENST00000592012 LRP2BPQ9P2M1 347 aa23.09■■□□□ 1.29
MBD3-209ENST00000592012 NEDD4P46934 1319 aa23.09■■□□□ 1.29
MBD3-209ENST00000592012 PNPLA7Q6ZV29 1317 aa23.09■■□□□ 1.29
MBD3-209ENST00000592012 BTAF1O14981 1849 aa23.08■■□□□ 1.29
MBD3-209ENST00000592012 ATL3Q6DD88 541 aa23.08■■□□□ 1.29
MBD3-209ENST00000592012 RAB11FIP4Q86YS3 637 aa23.08■■□□□ 1.29
MBD3-209ENST00000592012 INCENPQ9NQS7 918 aa23.08■■□□□ 1.29
MBD3-209ENST00000592012 SRP68Q9UHB9 627 aaKnown RBP23.08■■□□□ 1.29
MBD3-209ENST00000592012 SCN7AQ01118 1682 aa23.08■■□□□ 1.29
MBD3-209ENST00000592012 CASZ1Q86V15 1759 aa23.08■■□□□ 1.29
MBD3-209ENST00000592012 GYG1P46976 350 aa23.08■■□□□ 1.29
MBD3-209ENST00000592012 CEBPZQ03701 1054 aaKnown RBP23.08■■□□□ 1.29
MBD3-209ENST00000592012 LCORLQ8N3X6 602 aa23.08■■□□□ 1.29
MBD3-209ENST00000592012 CELF1Q92879 486 aaKnown RBP23.08■■□□□ 1.29
MBD3-209ENST00000592012 IQSEC3Q9UPP2 1182 aaPredicted RBP23.08■■□□□ 1.29
MBD3-209ENST00000592012 CPLX1O14810 134 aa23.07■■□□□ 1.28
MBD3-209ENST00000592012 PRKAB2O43741 272 aa23.07■■□□□ 1.28
MBD3-209ENST00000592012 GNAT2P19087 354 aa23.07■■□□□ 1.28
MBD3-209ENST00000592012 CAMK4Q16566 473 aa23.07■■□□□ 1.28
MBD3-209ENST00000592012 FAM182BQ5T319 152 aa23.07■■□□□ 1.28
MBD3-209ENST00000592012 IGDCC4Q8TDY8 1250 aa23.07■■□□□ 1.28
MBD3-209ENST00000592012 SETDB2Q96T68 719 aa23.07■■□□□ 1.28
MBD3-209ENST00000592012 MAP3K11Q16584 847 aa23.07■■□□□ 1.28
MBD3-209ENST00000592012 TMEM87BQ96K49 555 aa23.07■■□□□ 1.28
MBD3-209ENST00000592012 USP28Q96RU2 1077 aa23.07■■□□□ 1.28
MBD3-209ENST00000592012 FTOQ9C0B1 505 aaKnown RBP eCLIP23.07■■□□□ 1.28
MBD3-209ENST00000592012 NYXQ9GZU5 481 aa23.07■■□□□ 1.28
MBD3-209ENST00000592012 DDX19AQ9NUU7 478 aaKnown RBP23.07■■□□□ 1.28
MBD3-209ENST00000592012 ORC3Q9UBD5 711 aaPredicted RBP23.07■■□□□ 1.28
MBD3-209ENST00000592012 A0A1B0GUL6 1792 aa23.06■■□□□ 1.28
MBD3-209ENST00000592012 GNPATO15228 680 aa23.06■■□□□ 1.28
MBD3-209ENST00000592012 NR1I2O75469 434 aa23.06■■□□□ 1.28
MBD3-209ENST00000592012 TACC3Q9Y6A5 838 aa23.06■■□□□ 1.28
MBD3-209ENST00000592012 CCDC192P0DO97 292 aa23.06■■□□□ 1.28
MBD3-209ENST00000592012 CTDSPL2Q05D32 466 aa23.06■■□□□ 1.28
MBD3-209ENST00000592012 FBXO18Q8NFZ0 1043 aa23.06■■□□□ 1.28
MBD3-209ENST00000592012 BICD2Q8TD16 824 aa23.06■■□□□ 1.28
MBD3-209ENST00000592012 C8orf76Q96K31 380 aa23.06■■□□□ 1.28
MBD3-209ENST00000592012 SENP2Q9HC62 589 aa23.06■■□□□ 1.28
MBD3-209ENST00000592012 GNL3LQ9NVN8 582 aaKnown RBP23.06■■□□□ 1.28
MBD3-209ENST00000592012 CCNL1Q9UK58 526 aaPredicted RBP23.06■■□□□ 1.28
MBD3-209ENST00000592012 ZPR1O75312 459 aa23.05■■□□□ 1.28
MBD3-209ENST00000592012 OTUD7BQ6GQQ9 843 aa23.05■■□□□ 1.28
MBD3-209ENST00000592012 ZNF396Q96N95 335 aaPredicted RBP23.05■■□□□ 1.28
MBD3-209ENST00000592012 ZSWIM5Q9P217 1185 aa23.05■■□□□ 1.28
MBD3-209ENST00000592012 SLC4A4Q9Y6R1 1079 aa23.05■■□□□ 1.28
MBD3-209ENST00000592012 THSD7AQ9UPZ6 1657 aa23.05■■□□□ 1.28
MBD3-209ENST00000592012 APOA5Q6Q788 366 aa23.05■■□□□ 1.28
MBD3-209ENST00000592012 RBM43Q6ZSC3 357 aaKnown RBP23.05■■□□□ 1.28
MBD3-209ENST00000592012 MIGA1Q8NAN2 632 aa23.05■■□□□ 1.28
MBD3-209ENST00000592012 TNMDQ9H2S6 317 aa23.05■■□□□ 1.28
MBD3-209ENST00000592012 SPATA31A6Q5VVP1 1343 aa23.04■■□□□ 1.28
MBD3-209ENST00000592012 AKNAD1Q5T1N1 836 aa23.04■■□□□ 1.28
MBD3-209ENST00000592012 AMIGO3Q86WK7 504 aa23.04■■□□□ 1.28
MBD3-209ENST00000592012 FAM84BQ96KN1 310 aaPredicted RBP23.04■■□□□ 1.28
MBD3-209ENST00000592012 NLRP3Q96P20 1036 aa23.04■■□□□ 1.28
MBD3-209ENST00000592012 NACAP1Q9BZK3 213 aa23.04■■□□□ 1.28
MBD3-209ENST00000592012 CLSTN2Q9H4D0 955 aa23.04■■□□□ 1.28
MBD3-209ENST00000592012 ABCF2Q9UG63 623 aa23.04■■□□□ 1.28
MBD3-209ENST00000592012 NOL7Q9UMY1 257 aaKnown RBP23.04■■□□□ 1.28
MBD3-209ENST00000592012 C4AP0C0L4 1744 aa23.04■■□□□ 1.28
MBD3-209ENST00000592012 C4BP0C0L5 1744 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms