RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 LRRFIP2Q9Y608 721 aaKnown RBP8.01□□□□□ -1.13
VPS4B-205ENST00000591383 TMEM88BA6NKF7 163 aa8□□□□□ -1.13
VPS4B-205ENST00000591383 H7C1W4 665 aa8□□□□□ -1.13
VPS4B-205ENST00000591383 PPEF1O14829 653 aaPredicted RBP8□□□□□ -1.13
VPS4B-205ENST00000591383 NBPF7P0C2Y1 421 aaPredicted RBP8□□□□□ -1.13
VPS4B-205ENST00000591383 SRGNP10124 158 aa8□□□□□ -1.13
VPS4B-205ENST00000591383 CASP7P55210 303 aa8□□□□□ -1.13
VPS4B-205ENST00000591383 TGFB2P61812 414 aa8□□□□□ -1.13
VPS4B-205ENST00000591383 MVPQ14764 893 aaKnown RBP8□□□□□ -1.13
VPS4B-205ENST00000591383 CRY2Q49AN0 593 aa8□□□□□ -1.13
VPS4B-205ENST00000591383 DALRD3Q5D0E6 543 aaKnown RBP8□□□□□ -1.13
VPS4B-205ENST00000591383 TAF7LQ5H9L4 462 aa8□□□□□ -1.13
VPS4B-205ENST00000591383 MORN1Q5T089 497 aa8□□□□□ -1.13
VPS4B-205ENST00000591383 FOXD4L5Q5VV16 416 aaPredicted RBP8□□□□□ -1.13
VPS4B-205ENST00000591383 DESI1Q6ICB0 168 aa8□□□□□ -1.13
VPS4B-205ENST00000591383 STYK1Q6J9G0 422 aa8□□□□□ -1.13
VPS4B-205ENST00000591383 PNMA1Q8ND90 353 aa8□□□□□ -1.13
VPS4B-205ENST00000591383 FOXD4L4Q8WXT5 416 aaPredicted RBP8□□□□□ -1.13
VPS4B-205ENST00000591383 MASTLQ96GX5 879 aa8□□□□□ -1.13
VPS4B-205ENST00000591383 RBM17Q96I25 401 aaKnown RBP8□□□□□ -1.13
VPS4B-205ENST00000591383 BICC1Q9H694 974 aaKnown RBP8□□□□□ -1.13
VPS4B-205ENST00000591383 VRTNQ9H8Y1 702 aa8□□□□□ -1.13
VPS4B-205ENST00000591383 PDZRN3Q9UPQ7 1066 aa8□□□□□ -1.13
VPS4B-205ENST00000591383 RNF40O75150 1001 aa7.99□□□□□ -1.13
VPS4B-205ENST00000591383 GNAI3P08754 354 aa7.99□□□□□ -1.13
VPS4B-205ENST00000591383 IRX6P78412 446 aaPredicted RBP7.99□□□□□ -1.13
VPS4B-205ENST00000591383 GPR162Q16538 588 aa7.99□□□□□ -1.13
VPS4B-205ENST00000591383 KMT5BQ4FZB7 885 aa7.99□□□□□ -1.13
VPS4B-205ENST00000591383 EPHA10Q5JZY3 1008 aa7.99□□□□□ -1.13
VPS4B-205ENST00000591383 SLC51AQ86UW1 340 aa7.99□□□□□ -1.13
VPS4B-205ENST00000591383 LAPTM4BQ86VI4 370 aa7.99□□□□□ -1.13
VPS4B-205ENST00000591383 TTLL6Q8N841 843 aa7.99□□□□□ -1.13
VPS4B-205ENST00000591383 CNKSR1Q969H4 720 aa7.99□□□□□ -1.13
VPS4B-205ENST00000591383 USP44Q9H0E7 712 aa7.99□□□□□ -1.13
VPS4B-205ENST00000591383 GREM2Q9H772 168 aa7.99□□□□□ -1.13
VPS4B-205ENST00000591383 PIM2Q9P1W9 311 aa7.99□□□□□ -1.13
VPS4B-205ENST00000591383 VPS9D1Q9Y2B5 631 aa7.99□□□□□ -1.13
VPS4B-205ENST00000591383 SUPT16HQ9Y5B9 1047 aaKnown RBP7.99□□□□□ -1.13
VPS4B-205ENST00000591383 UTYO14607 1347 aa7.99□□□□□ -1.13
VPS4B-205ENST00000591383 RTL9Q8NET4 1388 aa7.98□□□□□ -1.13
VPS4B-205ENST00000591383 FER1L6Q2WGJ9 1857 aa7.98□□□□□ -1.13
VPS4B-205ENST00000591383 LTBP1Q14766 1721 aa7.98□□□□□ -1.13
VPS4B-205ENST00000591383 ATP9BO43861 1147 aa7.98□□□□□ -1.13
VPS4B-205ENST00000591383 GNAI2P04899 355 aa7.98□□□□□ -1.13
VPS4B-205ENST00000591383 YBX3P16989 372 aaKnown RBP eCLIP7.98□□□□□ -1.13
VPS4B-205ENST00000591383 GRAPQ13588 217 aa7.98□□□□□ -1.13
VPS4B-205ENST00000591383 PDE3AQ14432 1141 aa7.98□□□□□ -1.13
VPS4B-205ENST00000591383 SLC10A5Q5PT55 438 aa7.98□□□□□ -1.13
VPS4B-205ENST00000591383 LMBR1LQ6UX01 489 aa7.98□□□□□ -1.13
VPS4B-205ENST00000591383 LYPD8Q6UX82 237 aa7.98□□□□□ -1.13
VPS4B-205ENST00000591383 GRAPLQ8TC17 118 aaPredicted RBP7.98□□□□□ -1.13
VPS4B-205ENST00000591383 CRBNQ96SW2 442 aa7.98□□□□□ -1.13
VPS4B-205ENST00000591383 CDC5LQ99459 802 aaKnown RBP7.98□□□□□ -1.13
VPS4B-205ENST00000591383 SEC31BQ9NQW1 1179 aa7.98□□□□□ -1.13
VPS4B-205ENST00000591383 DDX19BQ9UMR2 479 aa7.98□□□□□ -1.13
VPS4B-205ENST00000591383 SLC27A5Q9Y2P5 690 aa7.98□□□□□ -1.13
VPS4B-205ENST00000591383 DUOX1Q9NRD9 1551 aa7.97□□□□□ -1.13
VPS4B-205ENST00000591383 UTRNP46939 3433 aa7.97□□□□□ -1.13
VPS4B-205ENST00000591383 ANKRD18BA2A2Z9 1011 aa7.97□□□□□ -1.13
VPS4B-205ENST00000591383 KLRG2A4D1S0 409 aaPredicted RBP7.97□□□□□ -1.13
VPS4B-205ENST00000591383 C21orf2O43822 256 aa7.97□□□□□ -1.13
VPS4B-205ENST00000591383 KCNA3P22001 575 aa7.97□□□□□ -1.13
VPS4B-205ENST00000591383 ITGA6P23229 1130 aa7.97□□□□□ -1.13
VPS4B-205ENST00000591383 IGHMBP2P38935 993 aaKnown RBP7.97□□□□□ -1.13
VPS4B-205ENST00000591383 FOXO4P98177 505 aa7.97□□□□□ -1.13
VPS4B-205ENST00000591383 RASSF7Q02833 373 aa7.97□□□□□ -1.13
VPS4B-205ENST00000591383 NR1H3Q13133 447 aa7.97□□□□□ -1.13
VPS4B-205ENST00000591383 IFIT5Q13325 482 aaKnown RBP7.97□□□□□ -1.13
VPS4B-205ENST00000591383 SF3B3Q15393 1217 aaKnown RBP7.97□□□□□ -1.13
VPS4B-205ENST00000591383 Q3C1V9 767 aa7.97□□□□□ -1.13
VPS4B-205ENST00000591383 PUS10Q3MIT2 529 aaKnown RBP7.97□□□□□ -1.13
VPS4B-205ENST00000591383 CCDC93Q567U6 631 aa7.97□□□□□ -1.13
VPS4B-205ENST00000591383 VARS2Q5ST30 1063 aaKnown RBP7.97□□□□□ -1.13
VPS4B-205ENST00000591383 OLFM4Q6UX06 510 aa7.97□□□□□ -1.13
VPS4B-205ENST00000591383 ANKRD18AQ8IVF6 992 aa7.97□□□□□ -1.13
VPS4B-205ENST00000591383 ANKRD44Q8N8A2 993 aa7.97□□□□□ -1.13
VPS4B-205ENST00000591383 TTLL11Q8NHH1 800 aa7.97□□□□□ -1.13
VPS4B-205ENST00000591383 CELF1Q92879 486 aaKnown RBP7.97□□□□□ -1.13
VPS4B-205ENST00000591383 PLA2G12BQ9BX93 195 aa7.97□□□□□ -1.13
VPS4B-205ENST00000591383 TMX4Q9H1E5 349 aaPredicted RBP7.97□□□□□ -1.13
VPS4B-205ENST00000591383 IVNS1ABPQ9Y6Y0 642 aa7.97□□□□□ -1.13
VPS4B-205ENST00000591383 CCDC88AQ3V6T2 1871 aa7.96□□□□□ -1.13
VPS4B-205ENST00000591383 ARAP2Q8WZ64 1704 aa7.96□□□□□ -1.14
VPS4B-205ENST00000591383 ACTN4O43707 911 aaKnown RBP7.96□□□□□ -1.14
VPS4B-205ENST00000591383 ALDH1B1P30837 517 aa7.96□□□□□ -1.14
VPS4B-205ENST00000591383 HOXA10P31260 410 aaPredicted RBP7.96□□□□□ -1.14
VPS4B-205ENST00000591383 CCDC57Q2TAC2 916 aa7.96□□□□□ -1.14
VPS4B-205ENST00000591383 KAZALD1Q96I82 304 aa7.96□□□□□ -1.14
VPS4B-205ENST00000591383 CRAMP1Q96RY5 1269 aa7.96□□□□□ -1.14
VPS4B-205ENST00000591383 MPHOSPH8Q99549 860 aa7.96□□□□□ -1.14
VPS4B-205ENST00000591383 SIL1Q9H173 461 aa7.96□□□□□ -1.14
VPS4B-205ENST00000591383 HDAC5Q9UQL6 1122 aa7.96□□□□□ -1.14
VPS4B-205ENST00000591383 BHMG1C9JSJ3 638 aaPredicted RBP7.95□□□□□ -1.14
VPS4B-205ENST00000591383 SRGAP3O43295 1099 aa7.95□□□□□ -1.14
VPS4B-205ENST00000591383 FBXO45P0C2W1 286 aa7.95□□□□□ -1.14
VPS4B-205ENST00000591383 RABL6Q3YEC7 729 aaPredicted RBP7.95□□□□□ -1.14
VPS4B-205ENST00000591383 SOGA3Q5TF21 947 aa7.95□□□□□ -1.14
VPS4B-205ENST00000591383 ARHGAP27Q6ZUM4 889 aa7.95□□□□□ -1.14
VPS4B-205ENST00000591383 KLHDC4Q8TBB5 520 aa7.95□□□□□ -1.14
VPS4B-205ENST00000591383 ZNF594Q96JF6 807 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms