RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 PDIA4P13667 645 aaKnown RBP13.36□□□□□ -0.27
TPM4-213ENST00000591226 FAM196AQ6ZSG2 479 aa13.36□□□□□ -0.27
TPM4-213ENST00000591226 TMEM87AQ8NBN3 555 aa13.36□□□□□ -0.27
TPM4-213ENST00000591226 MINPP1Q9UNW1 487 aa13.36□□□□□ -0.27
TPM4-213ENST00000591226 GYG1P46976 350 aa13.35□□□□□ -0.27
TPM4-213ENST00000591226 AIDAQ96BJ3 306 aa13.35□□□□□ -0.27
TPM4-213ENST00000591226 NLRP3Q96P20 1036 aa13.35□□□□□ -0.27
TPM4-213ENST00000591226 NBPF3Q9H094 633 aa13.35□□□□□ -0.27
TPM4-213ENST00000591226 GPHNQ9NQX3 736 aaPredicted RBP13.35□□□□□ -0.27
TPM4-213ENST00000591226 LRRC4BQ9NT99 713 aa13.35□□□□□ -0.27
TPM4-213ENST00000591226 FIBPO43427 364 aa13.35□□□□□ -0.27
TPM4-213ENST00000591226 APPP05067 770 aa13.35□□□□□ -0.27
TPM4-213ENST00000591226 RFC4P35249 363 aa13.35□□□□□ -0.27
TPM4-213ENST00000591226 ZNF445P59923 1031 aa13.35□□□□□ -0.27
TPM4-213ENST00000591226 DNM1Q05193 864 aaKnown RBP13.35□□□□□ -0.27
TPM4-213ENST00000591226 TPTE2Q6XPS3 522 aa13.35□□□□□ -0.27
TPM4-213ENST00000591226 FERMT3Q86UX7 667 aa13.35□□□□□ -0.27
TPM4-213ENST00000591226 MB21D2Q8IYB1 491 aaPredicted RBP13.35□□□□□ -0.27
TPM4-213ENST00000591226 STRBPQ96SI9 672 aaKnown RBP13.35□□□□□ -0.27
TPM4-213ENST00000591226 NAP1L2Q9ULW6 460 aaPredicted RBP13.35□□□□□ -0.27
TPM4-213ENST00000591226 ZNF804BA4D1E1 1349 aa13.34□□□□□ -0.27
TPM4-213ENST00000591226 MBD4O95243 580 aa13.34□□□□□ -0.27
TPM4-213ENST00000591226 UBE4AQ14139 1066 aa13.34□□□□□ -0.27
TPM4-213ENST00000591226 TRAPPC3LQ5T215 181 aa13.34□□□□□ -0.27
TPM4-213ENST00000591226 DDX11Q96FC9 970 aa13.34□□□□□ -0.27
TPM4-213ENST00000591226 QTRT2Q9H974 415 aaKnown RBP13.34□□□□□ -0.27
TPM4-213ENST00000591226 COL1A1P02452 1464 aaPredicted RBP13.34□□□□□ -0.27
TPM4-213ENST00000591226 PRC1O43663 620 aa13.34□□□□□ -0.27
TPM4-213ENST00000591226 CCT2P78371 535 aaKnown RBP13.34□□□□□ -0.27
TPM4-213ENST00000591226 TBC1D10CQ8IV04 446 aa13.34□□□□□ -0.27
TPM4-213ENST00000591226 NCOA5Q9HCD5 579 aaKnown RBP13.34□□□□□ -0.27
TPM4-213ENST00000591226 TNRC6CQ9HCJ0 1690 aaKnown RBP13.33□□□□□ -0.27
TPM4-213ENST00000591226 ANTXR2P58335 489 aa13.33□□□□□ -0.28
TPM4-213ENST00000591226 RALYLQ86SE5 291 aaKnown RBP13.33□□□□□ -0.28
TPM4-213ENST00000591226 NSUN7Q8NE18 718 aaKnown RBP13.33□□□□□ -0.28
TPM4-213ENST00000591226 NCOA7Q8NI08 942 aa13.33□□□□□ -0.28
TPM4-213ENST00000591226 SMARCC2Q8TAQ2 1214 aa13.33□□□□□ -0.28
TPM4-213ENST00000591226 ARMT1Q9H993 441 aa13.33□□□□□ -0.28
TPM4-213ENST00000591226 CTDNEP1O95476 244 aa13.33□□□□□ -0.28
TPM4-213ENST00000591226 PDIA3P30101 505 aaKnown RBP13.33□□□□□ -0.28
TPM4-213ENST00000591226 MCM5P33992 734 aa13.33□□□□□ -0.28
TPM4-213ENST00000591226 RPS8P62241 208 aaKnown RBP13.33□□□□□ -0.28
TPM4-213ENST00000591226 FBXL16Q8N461 479 aa13.33□□□□□ -0.28
TPM4-213ENST00000591226 LLPHQ9BRT6 129 aaKnown RBP13.33□□□□□ -0.28
TPM4-213ENST00000591226 EPB41L4AQ9HCS5 686 aaPredicted RBP13.33□□□□□ -0.28
TPM4-213ENST00000591226 LRP2BPQ9P2M1 347 aa13.33□□□□□ -0.28
TPM4-213ENST00000591226 DENND2AQ9ULE3 1009 aa13.33□□□□□ -0.28
TPM4-213ENST00000591226 ZNF274Q96GC6 653 aaPredicted RBP13.32□□□□□ -0.28
TPM4-213ENST00000591226 NPHP1O15259 732 aa13.32□□□□□ -0.28
TPM4-213ENST00000591226 FAM173BQ6P4H8 233 aa13.32□□□□□ -0.28
TPM4-213ENST00000591226 NKX2-3Q8TAU0 364 aa13.32□□□□□ -0.28
TPM4-213ENST00000591226 GNL3LQ9NVN8 582 aaKnown RBP13.32□□□□□ -0.28
TPM4-213ENST00000591226 PTPDC1A2A3K4 754 aa13.31□□□□□ -0.28
TPM4-213ENST00000591226 KLRK1P26718 216 aa13.31□□□□□ -0.28
TPM4-213ENST00000591226 NFIXQ14938 502 aa13.31□□□□□ -0.28
TPM4-213ENST00000591226 LCORLQ8N3X6 602 aa13.31□□□□□ -0.28
TPM4-213ENST00000591226 FAM184AQ8NB25 1140 aa13.31□□□□□ -0.28
TPM4-213ENST00000591226 FAM84BQ96KN1 310 aaPredicted RBP13.31□□□□□ -0.28
TPM4-213ENST00000591226 BRWD3Q6RI45 1802 aa13.31□□□□□ -0.28
TPM4-213ENST00000591226 CARMIL3Q8ND23 1372 aa13.31□□□□□ -0.28
TPM4-213ENST00000591226 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.31□□□□□ -0.28
TPM4-213ENST00000591226 SYCE3A1L190 88 aa13.31□□□□□ -0.28
TPM4-213ENST00000591226 PATL2C9JE40 543 aaKnown RBP13.31□□□□□ -0.28
TPM4-213ENST00000591226 TM4SF1P30408 202 aa13.31□□□□□ -0.28
TPM4-213ENST00000591226 EVCP57679 992 aa13.31□□□□□ -0.28
TPM4-213ENST00000591226 ALX1Q15699 326 aa13.31□□□□□ -0.28
TPM4-213ENST00000591226 CAVIN4Q5BKX8 364 aa13.31□□□□□ -0.28
TPM4-213ENST00000591226 VPS37DQ86XT2 251 aa13.31□□□□□ -0.28
TPM4-213ENST00000591226 ABCF2Q9UG63 623 aa13.31□□□□□ -0.28
TPM4-213ENST00000591226 UBR3Q6ZT12 1888 aa13.3□□□□□ -0.28
TPM4-213ENST00000591226 PRKAB2O43741 272 aa13.3□□□□□ -0.28
TPM4-213ENST00000591226 PPFIA3O75145 1194 aa13.3□□□□□ -0.28
TPM4-213ENST00000591226 TRDNQ13061 729 aa13.3□□□□□ -0.28
TPM4-213ENST00000591226 IFNL3Q8IZI9 196 aa13.3□□□□□ -0.28
TPM4-213ENST00000591226 MIGA1Q8NAN2 632 aa13.3□□□□□ -0.28
TPM4-213ENST00000591226 ZMYM6O95789 1325 aa13.3□□□□□ -0.28
TPM4-213ENST00000591226 KLF18A0A0U1RQI7 1052 aa13.3□□□□□ -0.28
TPM4-213ENST00000591226 GSG1L2A8MUP6 293 aa13.3□□□□□ -0.28
TPM4-213ENST00000591226 FOSBP53539 338 aa13.3□□□□□ -0.28
TPM4-213ENST00000591226 UBE2HP62256 183 aa13.3□□□□□ -0.28
TPM4-213ENST00000591226 CYB5R4Q7L1T6 521 aa13.3□□□□□ -0.28
TPM4-213ENST00000591226 NAPBQ9H115 298 aa13.3□□□□□ -0.28
TPM4-213ENST00000591226 NEDD4P46934 1319 aa13.3□□□□□ -0.28
TPM4-213ENST00000591226 WDR19Q8NEZ3 1342 aa13.3□□□□□ -0.28
TPM4-213ENST00000591226 SALL1Q9NSC2 1324 aa13.3□□□□□ -0.28
TPM4-213ENST00000591226 H3BQV1 296 aa13.29□□□□□ -0.28
TPM4-213ENST00000591226 CYP7A1P22680 504 aa13.29□□□□□ -0.28
TPM4-213ENST00000591226 CSPP1Q1MSJ5 1256 aa13.29□□□□□ -0.28
TPM4-213ENST00000591226 IFFO2Q5TF58 517 aa13.29□□□□□ -0.28
TPM4-213ENST00000591226 ADGRA1Q86SQ6 560 aa13.29□□□□□ -0.28
TPM4-213ENST00000591226 RAB11FIP4Q86YS3 637 aa13.29□□□□□ -0.28
TPM4-213ENST00000591226 RAI14Q9P0K7 980 aa13.29□□□□□ -0.28
TPM4-213ENST00000591226 PNPLA7Q6ZV29 1317 aa13.29□□□□□ -0.28
TPM4-213ENST00000591226 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
TPM4-213ENST00000591226 GOLGA8BA8MQT2 603 aa13.29□□□□□ -0.28
TPM4-213ENST00000591226 B4E1Z4 1266 aa13.29□□□□□ -0.28
TPM4-213ENST00000591226 KRT85P78386 507 aa13.29□□□□□ -0.28
TPM4-213ENST00000591226 HMGN5P82970 282 aaKnown RBP13.29□□□□□ -0.28
TPM4-213ENST00000591226 SLC51AQ86UW1 340 aa13.29□□□□□ -0.28
TPM4-213ENST00000591226 CNBD1Q8NA66 436 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms