RNA–Protein interactions for RNA: ENST00000590485.1

SAFB-208, Transcript of scaffold attachment factor B, humanhuman

TSL 3

Gene SAFB, Length 548 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-208ENST00000590485 DMRTC2Q8IXT2 367 aaPredicted RBP7.26□□□□□ -1.25
SAFB-208ENST00000590485 DDX54Q8TDD1 881 aaKnown RBP7.26□□□□□ -1.25
SAFB-208ENST00000590485 DCAF11Q8TEB1 546 aa7.26□□□□□ -1.25
SAFB-208ENST00000590485 CEP44Q9C0F1 390 aa7.26□□□□□ -1.25
SAFB-208ENST00000590485 SRA1Q9HD15 236 aaKnown RBP7.26□□□□□ -1.25
SAFB-208ENST00000590485 GPN3Q9UHW5 284 aaPredicted RBP7.26□□□□□ -1.25
SAFB-208ENST00000590485 LINC01387J3KSC0 135 aa7.25□□□□□ -1.25
SAFB-208ENST00000590485 EIF4EBP3O60516 100 aaPredicted RBP7.25□□□□□ -1.25
SAFB-208ENST00000590485 CTSHP09668 335 aa7.25□□□□□ -1.25
SAFB-208ENST00000590485 COL8A1P27658 744 aa7.25□□□□□ -1.25
SAFB-208ENST00000590485 ST13P50502 369 aaKnown RBP7.25□□□□□ -1.25
SAFB-208ENST00000590485 PIP4K2BP78356 416 aa7.25□□□□□ -1.25
SAFB-208ENST00000590485 PPP2R3AQ06190 1150 aa7.25□□□□□ -1.25
SAFB-208ENST00000590485 TAF1CQ15572 869 aaPredicted RBP7.25□□□□□ -1.25
SAFB-208ENST00000590485 TXNDC11Q6PKC3 985 aa7.25□□□□□ -1.25
SAFB-208ENST00000590485 TPTE2Q6XPS3 522 aa7.25□□□□□ -1.25
SAFB-208ENST00000590485 TMEM87AQ8NBN3 555 aa7.25□□□□□ -1.25
SAFB-208ENST00000590485 WNT8BQ93098 351 aa7.25□□□□□ -1.25
SAFB-208ENST00000590485 BACH2Q9BYV9 841 aa7.25□□□□□ -1.25
SAFB-208ENST00000590485 NOP53Q9NZM5 478 aaKnown RBP7.25□□□□□ -1.25
SAFB-208ENST00000590485 FANCD2Q9BXW9 1451 aa7.24□□□□□ -1.25
SAFB-208ENST00000590485 B3GALT4O96024 378 aa7.24□□□□□ -1.25
SAFB-208ENST00000590485 ESRRAP11474 423 aaPredicted RBP7.24□□□□□ -1.25
SAFB-208ENST00000590485 COL9A3Q14050 684 aaPredicted RBP7.24□□□□□ -1.25
SAFB-208ENST00000590485 CCDC85BQ15834 202 aaPredicted RBP7.24□□□□□ -1.25
SAFB-208ENST00000590485 MEI1Q5TIA1 1274 aa7.24□□□□□ -1.25
SAFB-208ENST00000590485 LINC00114Q6XXX2 140 aa7.24□□□□□ -1.25
SAFB-208ENST00000590485 DTWD1Q8N5C7 304 aa7.24□□□□□ -1.25
SAFB-208ENST00000590485 ANKRD24Q8TF21 1146 aa7.24□□□□□ -1.25
SAFB-208ENST00000590485 SLC7A3Q8WY07 619 aa7.24□□□□□ -1.25
SAFB-208ENST00000590485 PLVAPQ9BX97 442 aa7.24□□□□□ -1.25
SAFB-208ENST00000590485 KRTAP4-8A0A0G2JLE6 195 aa7.23□□□□□ -1.25
SAFB-208ENST00000590485 SCAMP3O14828 347 aaKnown RBP7.23□□□□□ -1.25
SAFB-208ENST00000590485 FSCN2O14926 492 aa7.23□□□□□ -1.25
SAFB-208ENST00000590485 FBXO24O75426 580 aa7.23□□□□□ -1.25
SAFB-208ENST00000590485 C19orf57Q0VDD7 668 aa7.23□□□□□ -1.25
SAFB-208ENST00000590485 PRRT3Q5FWE3 981 aa7.23□□□□□ -1.25
SAFB-208ENST00000590485 TRIM11Q96F44 468 aa7.23□□□□□ -1.25
SAFB-208ENST00000590485 CARD10Q9BWT7 1032 aa7.23□□□□□ -1.25
SAFB-208ENST00000590485 SOX17Q9H6I2 414 aaPredicted RBP7.23□□□□□ -1.25
SAFB-208ENST00000590485 SEC31BQ9NQW1 1179 aa7.23□□□□□ -1.25
SAFB-208ENST00000590485 TMEM39AQ9NV64 488 aa7.23□□□□□ -1.25
SAFB-208ENST00000590485 USP31Q70CQ4 1352 aa7.22□□□□□ -1.25
SAFB-208ENST00000590485 FAAP100Q0VG06 881 aa7.22□□□□□ -1.25
SAFB-208ENST00000590485 TRIM28Q13263 835 aaKnown RBP7.22□□□□□ -1.25
SAFB-208ENST00000590485 ZNF423Q2M1K9 1284 aa7.22□□□□□ -1.25
SAFB-208ENST00000590485 SV2BQ7L1I2 683 aa7.22□□□□□ -1.25
SAFB-208ENST00000590485 KLHL23Q8NBE8 558 aa7.22□□□□□ -1.25
SAFB-208ENST00000590485 OSGEPQ9NPF4 335 aa7.22□□□□□ -1.25
SAFB-208ENST00000590485 A0A0A0MRY4 1105 aa7.21□□□□□ -1.26
SAFB-208ENST00000590485 SOX1O00570 391 aaPredicted RBP7.21□□□□□ -1.26
SAFB-208ENST00000590485 ZNF76P36508 570 aa7.21□□□□□ -1.26
SAFB-208ENST00000590485 ZNF157P51786 506 aaPredicted RBP7.21□□□□□ -1.26
SAFB-208ENST00000590485 GSTM4Q03013 218 aa7.21□□□□□ -1.26
SAFB-208ENST00000590485 SETDB1Q15047 1291 aa7.21□□□□□ -1.26
SAFB-208ENST00000590485 METTL5Q9NRN9 209 aaKnown RBP7.21□□□□□ -1.26
SAFB-208ENST00000590485 SAMM50Q9Y512 469 aa7.21□□□□□ -1.26
SAFB-208ENST00000590485 WIZO95785 1651 aa7.21□□□□□ -1.26
SAFB-208ENST00000590485 RIMBP3CA6NJZ7 1639 aa7.2□□□□□ -1.26
SAFB-208ENST00000590485 RIMBP3BA6NNM3 1639 aa7.2□□□□□ -1.26
SAFB-208ENST00000590485 RIMBP3Q9UFD9 1639 aa7.2□□□□□ -1.26
SAFB-208ENST00000590485 CFTRP13569 1480 aa7.2□□□□□ -1.26
SAFB-208ENST00000590485 RLBP1P12271 317 aa7.2□□□□□ -1.26
SAFB-208ENST00000590485 TCF3P15923 654 aa7.2□□□□□ -1.26
SAFB-208ENST00000590485 AP3B2Q13367 1082 aa7.2□□□□□ -1.26
SAFB-208ENST00000590485 FMR1NBQ8N0W7 255 aaPredicted RBP7.2□□□□□ -1.26
SAFB-208ENST00000590485 NECAB3Q96P71 396 aaPredicted RBP7.2□□□□□ -1.26
SAFB-208ENST00000590485 NOC4LQ9BVI4 516 aaKnown RBP7.2□□□□□ -1.26
SAFB-208ENST00000590485 URB2Q14146 1524 aaKnown RBP7.19□□□□□ -1.26
SAFB-208ENST00000590485 DEAF1O75398 565 aaPredicted RBP7.19□□□□□ -1.26
SAFB-208ENST00000590485 CELA3AP09093 270 aa7.19□□□□□ -1.26
SAFB-208ENST00000590485 CD68P34810 354 aaPredicted RBP7.19□□□□□ -1.26
SAFB-208ENST00000590485 FANCCQ00597 558 aa7.19□□□□□ -1.26
SAFB-208ENST00000590485 LDLRAD1Q5T700 205 aa7.19□□□□□ -1.26
SAFB-208ENST00000590485 HS2ST1Q7LGA3 356 aa7.19□□□□□ -1.26
SAFB-208ENST00000590485 ALYREFQ86V81 257 aaKnown RBP7.19□□□□□ -1.26
SAFB-208ENST00000590485 FBXO11Q86XK2 927 aa7.19□□□□□ -1.26
SAFB-208ENST00000590485 KRTAP19-1Q8IUB9 90 aa7.19□□□□□ -1.26
SAFB-208ENST00000590485 RNF34Q969K3 372 aa7.19□□□□□ -1.26
SAFB-208ENST00000590485 FAM229AH3BQW9 127 aa7.18□□□□□ -1.26
SAFB-208ENST00000590485 ENC1O14682 589 aa7.18□□□□□ -1.26
SAFB-208ENST00000590485 CYP11A1P05108 521 aa7.18□□□□□ -1.26
SAFB-208ENST00000590485 ELNP15502 786 aa7.18□□□□□ -1.26
SAFB-208ENST00000590485 RANGAP1P46060 587 aaPredicted RBP7.18□□□□□ -1.26
SAFB-208ENST00000590485 NLRP12P59046 1061 aa7.18□□□□□ -1.26
SAFB-208ENST00000590485 HNRNPUQ00839 825 aaKnown RBP eCLIP7.18□□□□□ -1.264e-7■□□□□ 8.3
SAFB-208ENST00000590485 HGSNATQ68CP4 663 aa7.18□□□□□ -1.26
SAFB-208ENST00000590485 ILDR2Q71H61 639 aa7.18□□□□□ -1.26
SAFB-208ENST00000590485 SULF2Q8IWU5 870 aa7.18□□□□□ -1.26
SAFB-208ENST00000590485 CORO1BQ9BR76 489 aa7.18□□□□□ -1.26
SAFB-208ENST00000590485 USP26Q9BXU7 913 aa7.18□□□□□ -1.26
SAFB-208ENST00000590485 EMILIN2Q9BXX0 1053 aa7.18□□□□□ -1.26
SAFB-208ENST00000590485 GGT7Q9UJ14 662 aa7.18□□□□□ -1.26
SAFB-208ENST00000590485 SPATA31C1P0DKV0 1188 aa7.17□□□□□ -1.26
SAFB-208ENST00000590485 LMNB1P20700 586 aa7.17□□□□□ -1.26
SAFB-208ENST00000590485 NME2P22392 152 aa7.17□□□□□ -1.26
SAFB-208ENST00000590485 PWP1Q13610 501 aa7.17□□□□□ -1.26
SAFB-208ENST00000590485 MAP3K11Q16584 847 aa7.17□□□□□ -1.26
SAFB-208ENST00000590485 HP1BP3Q5SSJ5 553 aaPredicted RBP7.17□□□□□ -1.26
SAFB-208ENST00000590485 PCNX4Q63HM2 1172 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms