RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CYP21A2P08686 494 aa8.71□□□□□ -1.02
ZNF540-206ENST00000589117 TERF1P54274 439 aa8.71□□□□□ -1.02
ZNF540-206ENST00000589117 STK3Q13188 491 aa8.71□□□□□ -1.02
ZNF540-206ENST00000589117 IFIT5Q13325 482 aaKnown RBP8.71□□□□□ -1.02
ZNF540-206ENST00000589117 TTC39AQ5SRH9 613 aa8.71□□□□□ -1.02
ZNF540-206ENST00000589117 ZMYM1Q5SVZ6 1142 aa8.71□□□□□ -1.02
ZNF540-206ENST00000589117 ATL3Q6DD88 541 aa8.71□□□□□ -1.02
ZNF540-206ENST00000589117 COL5A2P05997 1499 aaPredicted RBP8.71□□□□□ -1.02
ZNF540-206ENST00000589117 DHX16O60231 1041 aaKnown RBP8.7□□□□□ -1.02
ZNF540-206ENST00000589117 OFD1O75665 1012 aa8.7□□□□□ -1.02
ZNF540-206ENST00000589117 PCCAP05165 728 aaPredicted RBP8.7□□□□□ -1.02
ZNF540-206ENST00000589117 VAC14Q08AM6 782 aa8.7□□□□□ -1.02
ZNF540-206ENST00000589117 DIXDC1Q155Q3 683 aa8.7□□□□□ -1.02
ZNF540-206ENST00000589117 MAP3K11Q16584 847 aa8.7□□□□□ -1.02
ZNF540-206ENST00000589117 ZSCAN25Q6NSZ9 544 aa8.7□□□□□ -1.02
ZNF540-206ENST00000589117 ISCA1Q9BUE6 129 aa8.7□□□□□ -1.02
ZNF540-206ENST00000589117 DDX19AQ9NUU7 478 aaKnown RBP8.7□□□□□ -1.02
ZNF540-206ENST00000589117 ZNF609O15014 1411 aa8.7□□□□□ -1.02
ZNF540-206ENST00000589117 GOLGA6L6A8MZA4 724 aa8.7□□□□□ -1.02
ZNF540-206ENST00000589117 CAVIN2O95810 425 aa8.7□□□□□ -1.02
ZNF540-206ENST00000589117 COL9A1P20849 921 aa8.7□□□□□ -1.02
ZNF540-206ENST00000589117 HSPA2P54652 639 aa8.7□□□□□ -1.02
ZNF540-206ENST00000589117 ZBTB38Q8NAP3 1195 aaPredicted RBP8.7□□□□□ -1.02
ZNF540-206ENST00000589117 RBM46Q8TBY0 533 aaKnown RBP8.7□□□□□ -1.02
ZNF540-206ENST00000589117 TCEANC2Q96MN5 208 aa8.7□□□□□ -1.02
ZNF540-206ENST00000589117 PLA2G12BQ9BX93 195 aa8.7□□□□□ -1.02
ZNF540-206ENST00000589117 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.7□□□□□ -1.02
ZNF540-206ENST00000589117 NUP62CLQ9H1M0 184 aa8.7□□□□□ -1.02
ZNF540-206ENST00000589117 ABCC12Q96J65 1359 aa8.7□□□□□ -1.02
ZNF540-206ENST00000589117 PFKFB2O60825 505 aa8.69□□□□□ -1.02
ZNF540-206ENST00000589117 KDM4AO75164 1064 aa8.69□□□□□ -1.02
ZNF540-206ENST00000589117 FKBP4Q02790 459 aaKnown RBP eCLIP8.69□□□□□ -1.02
ZNF540-206ENST00000589117 IMMTQ16891 758 aaKnown RBP8.69□□□□□ -1.02
ZNF540-206ENST00000589117 NAA16Q6N069 864 aaPredicted RBP8.69□□□□□ -1.02
ZNF540-206ENST00000589117 C3orf67Q6ZVT6 689 aa8.69□□□□□ -1.02
ZNF540-206ENST00000589117 CDC37L1Q7L3B6 337 aa8.69□□□□□ -1.02
ZNF540-206ENST00000589117 FERMT3Q86UX7 667 aa8.69□□□□□ -1.02
ZNF540-206ENST00000589117 BRF1Q92994 677 aa8.69□□□□□ -1.02
ZNF540-206ENST00000589117 ZDHHC16Q969W1 377 aa8.69□□□□□ -1.02
ZNF540-206ENST00000589117 ZNF274Q96GC6 653 aaPredicted RBP8.69□□□□□ -1.02
ZNF540-206ENST00000589117 TRIM34Q9BYJ4 488 aa8.69□□□□□ -1.02
ZNF540-206ENST00000589117 HSPD1P10809 573 aaKnown RBP8.69□□□□□ -1.02
ZNF540-206ENST00000589117 HCLS1P14317 486 aaPredicted RBP8.69□□□□□ -1.02
ZNF540-206ENST00000589117 GUCA2AQ02747 115 aa8.69□□□□□ -1.02
ZNF540-206ENST00000589117 ST3GAL1Q11201 340 aa8.69□□□□□ -1.02
ZNF540-206ENST00000589117 LRRC24Q50LG9 513 aa8.69□□□□□ -1.02
ZNF540-206ENST00000589117 CCDC129Q6ZRS4 1044 aa8.69□□□□□ -1.02
ZNF540-206ENST00000589117 EPS8L1Q8TE68 723 aa8.69□□□□□ -1.02
ZNF540-206ENST00000589117 ZNF396Q96N95 335 aaPredicted RBP8.69□□□□□ -1.02
ZNF540-206ENST00000589117 UCN2Q96RP3 112 aa8.69□□□□□ -1.02
ZNF540-206ENST00000589117 SEC62Q99442 399 aaKnown RBP8.69□□□□□ -1.02
ZNF540-206ENST00000589117 TNMDQ9H2S6 317 aa8.69□□□□□ -1.02
ZNF540-206ENST00000589117 TSKSQ9UJT2 592 aa8.69□□□□□ -1.02
ZNF540-206ENST00000589117 NDUFB9Q9Y6M9 179 aa8.69□□□□□ -1.02
ZNF540-206ENST00000589117 STRCP1A6NGW2 1772 aa8.69□□□□□ -1.02
ZNF540-206ENST00000589117 TTF1Q15361 905 aaPredicted RBP8.68□□□□□ -1.02
ZNF540-206ENST00000589117 WASHC4Q2M389 1173 aa8.68□□□□□ -1.02
ZNF540-206ENST00000589117 GIMAP6Q6P9H5 292 aa8.68□□□□□ -1.02
ZNF540-206ENST00000589117 CERKQ8TCT0 537 aa8.68□□□□□ -1.02
ZNF540-206ENST00000589117 TNS2Q63HR2 1409 aa8.68□□□□□ -1.02
ZNF540-206ENST00000589117 NUTM2BA6NNL0 878 aaPredicted RBP8.68□□□□□ -1.02
ZNF540-206ENST00000589117 NUTM2EB1AL46 878 aaPredicted RBP8.68□□□□□ -1.02
ZNF540-206ENST00000589117 E7EWF7 191 aa8.68□□□□□ -1.02
ZNF540-206ENST00000589117 HAX1O00165 279 aa8.68□□□□□ -1.02
ZNF540-206ENST00000589117 ADCY5O95622 1261 aa8.68□□□□□ -1.02
ZNF540-206ENST00000589117 CSF1RP07333 972 aa8.68□□□□□ -1.02
ZNF540-206ENST00000589117 CTDSPL2Q05D32 466 aa8.68□□□□□ -1.02
ZNF540-206ENST00000589117 SASS6Q6UVJ0 657 aa8.68□□□□□ -1.02
ZNF540-206ENST00000589117 TTC6Q86TZ1 520 aa8.68□□□□□ -1.02
ZNF540-206ENST00000589117 NUTM2AQ8IVF1 878 aaPredicted RBP8.68□□□□□ -1.02
ZNF540-206ENST00000589117 FBXL16Q8N461 479 aa8.68□□□□□ -1.02
ZNF540-206ENST00000589117 BICD2Q8TD16 824 aa8.68□□□□□ -1.02
ZNF540-206ENST00000589117 LEO1Q8WVC0 666 aaPredicted RBP8.68□□□□□ -1.02
ZNF540-206ENST00000589117 XAGE2Q96GT9 111 aa8.68□□□□□ -1.02
ZNF540-206ENST00000589117 ZNF594Q96JF6 807 aaPredicted RBP8.68□□□□□ -1.02
ZNF540-206ENST00000589117 PPP1R12CQ9BZL4 782 aa8.68□□□□□ -1.02
ZNF540-206ENST00000589117 MAP3K15Q6ZN16 1313 aa8.68□□□□□ -1.02
ZNF540-206ENST00000589117 KCPQ6ZWJ8 1503 aa8.67□□□□□ -1.02
ZNF540-206ENST00000589117 ANKRD18BA2A2Z9 1011 aa8.67□□□□□ -1.02
ZNF540-206ENST00000589117 CTAGE5O15320 804 aa8.67□□□□□ -1.02
ZNF540-206ENST00000589117 NUDT7P0C024 238 aa8.67□□□□□ -1.02
ZNF540-206ENST00000589117 EXOSC10Q01780 885 aaKnown RBP8.67□□□□□ -1.02
ZNF540-206ENST00000589117 TUSC1Q2TAM9 212 aa8.67□□□□□ -1.02
ZNF540-206ENST00000589117 METTL24Q5JXM2 366 aa8.67□□□□□ -1.02
ZNF540-206ENST00000589117 LDHAL6AQ6ZMR3 332 aa8.67□□□□□ -1.02
ZNF540-206ENST00000589117 SMARCC2Q8TAQ2 1214 aa8.67□□□□□ -1.02
ZNF540-206ENST00000589117 CDHR2Q9BYE9 1310 aa8.67□□□□□ -1.02
ZNF540-206ENST00000589117 AGXT2Q9BYV1 514 aa8.67□□□□□ -1.02
ZNF540-206ENST00000589117 SPEF2Q9C093 1822 aa8.67□□□□□ -1.02
ZNF540-206ENST00000589117 USP25Q9UHP3 1055 aa8.67□□□□□ -1.02
ZNF540-206ENST00000589117 NAP1L2Q9ULW6 460 aaPredicted RBP8.67□□□□□ -1.02
ZNF540-206ENST00000589117 TAF6LQ9Y6J9 622 aa8.67□□□□□ -1.02
ZNF540-206ENST00000589117 TCHHQ07283 1943 aa8.67□□□□□ -1.02
ZNF540-206ENST00000589117 UBR2Q8IWV8 1755 aa8.67□□□□□ -1.02
ZNF540-206ENST00000589117 SCRN1Q12765 414 aa8.66□□□□□ -1.02
ZNF540-206ENST00000589117 TRDNQ13061 729 aa8.66□□□□□ -1.02
ZNF540-206ENST00000589117 RALYLQ86SE5 291 aaKnown RBP8.66□□□□□ -1.02
ZNF540-206ENST00000589117 FAM200AQ8TCP9 573 aa8.66□□□□□ -1.02
ZNF540-206ENST00000589117 PIGBQ92521 554 aa8.66□□□□□ -1.02
ZNF540-206ENST00000589117 APPBP2Q92624 585 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms