RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 TSGA10IPQ3SY00 556 aa31.13■■■□□ 2.57
SCAMP4-210ENST00000588555 SPTY2D1Q68D10 685 aaPredicted RBP31.13■■■□□ 2.57
SCAMP4-210ENST00000588555 TAF6LQ9Y6J9 622 aa31.13■■■□□ 2.57
SCAMP4-210ENST00000588555 MBD4O95243 580 aa31.12■■■□□ 2.57
SCAMP4-210ENST00000588555 ZKSCAN1P17029 563 aaPredicted RBP31.12■■■□□ 2.57
SCAMP4-210ENST00000588555 NAA16Q6N069 864 aaPredicted RBP31.12■■■□□ 2.57
SCAMP4-210ENST00000588555 TMED8Q6PL24 325 aaPredicted RBP31.12■■■□□ 2.57
SCAMP4-210ENST00000588555 GRIPAP1Q4V328 841 aa31.12■■■□□ 2.57
SCAMP4-210ENST00000588555 CD2APQ9Y5K6 639 aa31.12■■■□□ 2.57
SCAMP4-210ENST00000588555 CYP21A2P08686 494 aa31.11■■■□□ 2.57
SCAMP4-210ENST00000588555 ADCK5Q3MIX3 580 aa31.11■■■□□ 2.57
SCAMP4-210ENST00000588555 GRIK5Q16478 980 aa31.1■■■□□ 2.57
SCAMP4-210ENST00000588555 CCDC93Q567U6 631 aa31.1■■■□□ 2.57
SCAMP4-210ENST00000588555 ARMT1Q9H993 441 aa31.1■■■□□ 2.57
SCAMP4-210ENST00000588555 PIM2Q9P1W9 311 aa31.1■■■□□ 2.57
SCAMP4-210ENST00000588555 RPAP1Q9BWH6 1393 aaPredicted RBP31.1■■■□□ 2.57
SCAMP4-210ENST00000588555 NEK4P51957 841 aa31.1■■■□□ 2.57
SCAMP4-210ENST00000588555 DOK7Q18PE1 504 aa31.1■■■□□ 2.57
SCAMP4-210ENST00000588555 HSCBQ8IWL3 235 aa31.1■■■□□ 2.57
SCAMP4-210ENST00000588555 LCORLQ8N3X6 602 aa31.1■■■□□ 2.57
SCAMP4-210ENST00000588555 MIGA1Q8NAN2 632 aa31.1■■■□□ 2.57
SCAMP4-210ENST00000588555 UPF3BQ9BZI7 483 aaKnown RBP31.1■■■□□ 2.57
SCAMP4-210ENST00000588555 TM6SF1Q9BZW5 370 aa31.1■■■□□ 2.57
SCAMP4-210ENST00000588555 LDHBP07195 334 aaKnown RBP31.09■■■□□ 2.57
SCAMP4-210ENST00000588555 RIOK1Q9BRS2 568 aaKnown RBP31.09■■■□□ 2.57
SCAMP4-210ENST00000588555 FGAP02671 866 aa31.08■■■□□ 2.57
SCAMP4-210ENST00000588555 ST18O60284 1047 aa31.07■■■□□ 2.56
SCAMP4-210ENST00000588555 TTLL5Q6EMB2 1281 aa31.07■■■□□ 2.56
SCAMP4-210ENST00000588555 RTKN2Q8IZC4 609 aa31.07■■■□□ 2.56
SCAMP4-210ENST00000588555 SUPT20HQ8NEM7 779 aa31.07■■■□□ 2.56
SCAMP4-210ENST00000588555 TBC1D22AQ8WUA7 517 aa31.07■■■□□ 2.56
SCAMP4-210ENST00000588555 DAXXQ9UER7 740 aaPredicted RBP31.07■■■□□ 2.56
SCAMP4-210ENST00000588555 GTF2IP78347 998 aa31.07■■■□□ 2.56
SCAMP4-210ENST00000588555 KIAA2012Q0VF49 1180 aa31.07■■■□□ 2.56
SCAMP4-210ENST00000588555 IL27Q8NEV9 243 aa31.07■■■□□ 2.56
SCAMP4-210ENST00000588555 JAKMIP1Q96N16 626 aaKnown RBP31.07■■■□□ 2.56
SCAMP4-210ENST00000588555 MAGEB6P1A0A0J9YX57 407 aa31.06■■■□□ 2.56
SCAMP4-210ENST00000588555 MFSD14BQ5SR56 506 aa31.06■■■□□ 2.56
SCAMP4-210ENST00000588555 PODNQ7Z5L7 613 aa31.06■■■□□ 2.56
SCAMP4-210ENST00000588555 DZIP1Q86YF9 867 aaKnown RBP31.06■■■□□ 2.56
SCAMP4-210ENST00000588555 PSMD1Q99460 953 aa31.06■■■□□ 2.56
SCAMP4-210ENST00000588555 ZSWIM6Q9HCJ5 1215 aa31.06■■■□□ 2.56
SCAMP4-210ENST00000588555 PPP1R1BQ9UD71 204 aaPredicted RBP31.06■■■□□ 2.56
SCAMP4-210ENST00000588555 CTNNA3Q9UI47 895 aa31.06■■■□□ 2.56
SCAMP4-210ENST00000588555 PATL2C9JE40 543 aaKnown RBP31.05■■■□□ 2.56
SCAMP4-210ENST00000588555 GNAT2P19087 354 aa31.05■■■□□ 2.56
SCAMP4-210ENST00000588555 DBNDD1Q9H9R9 158 aa31.05■■■□□ 2.56
SCAMP4-210ENST00000588555 ZMYM6O95789 1325 aa31.05■■■□□ 2.56
SCAMP4-210ENST00000588555 CASTP20810 708 aaKnown RBP31.05■■■□□ 2.56
SCAMP4-210ENST00000588555 ALX1Q15699 326 aa31.05■■■□□ 2.56
SCAMP4-210ENST00000588555 EPB41L4AQ9HCS5 686 aaPredicted RBP31.05■■■□□ 2.56
SCAMP4-210ENST00000588555 ZNF646O15015 1829 aaPredicted RBP31.04■■■□□ 2.56
SCAMP4-210ENST00000588555 GSG1L2A8MUP6 293 aa31.04■■■□□ 2.56
SCAMP4-210ENST00000588555 KRT32Q14532 448 aa31.04■■■□□ 2.56
SCAMP4-210ENST00000588555 AOC3Q16853 763 aa31.04■■■□□ 2.56
SCAMP4-210ENST00000588555 TTC14Q96N46 770 aa31.04■■■□□ 2.56
SCAMP4-210ENST00000588555 K7ELQ4 463 aaPredicted RBP31.03■■■□□ 2.56
SCAMP4-210ENST00000588555 COL9A3Q14050 684 aaPredicted RBP31.03■■■□□ 2.56
SCAMP4-210ENST00000588555 DALRD3Q5D0E6 543 aaKnown RBP31.03■■■□□ 2.56
SCAMP4-210ENST00000588555 SCN9AQ15858 1988 aa31.03■■■□□ 2.56
SCAMP4-210ENST00000588555 G3V3G9 751 aa31.02■■■□□ 2.56
SCAMP4-210ENST00000588555 PRKAB2O43741 272 aa31.02■■■□□ 2.56
SCAMP4-210ENST00000588555 DYNLL1P63167 89 aaKnown RBP31.02■■■□□ 2.56
SCAMP4-210ENST00000588555 DCAF8Q5TAQ9 597 aa31.02■■■□□ 2.56
SCAMP4-210ENST00000588555 SOGA3Q5TF21 947 aa31.02■■■□□ 2.56
SCAMP4-210ENST00000588555 LAMA4Q16363 1823 aa31.02■■■□□ 2.56
SCAMP4-210ENST00000588555 CPA1P15085 419 aa31.02■■■□□ 2.56
SCAMP4-210ENST00000588555 PSMA5P28066 241 aa31.02■■■□□ 2.56
SCAMP4-210ENST00000588555 STOX1Q6ZVD7 989 aa31.02■■■□□ 2.56
SCAMP4-210ENST00000588555 SLC4A4Q9Y6R1 1079 aa31.02■■■□□ 2.56
SCAMP4-210ENST00000588555 ECE2O60344 883 aa31.01■■■□□ 2.55
SCAMP4-210ENST00000588555 APPP05067 770 aa31.01■■■□□ 2.55
SCAMP4-210ENST00000588555 IFNL3Q8IZI9 196 aa31.01■■■□□ 2.55
SCAMP4-210ENST00000588555 KLHL34Q8N239 644 aa31.01■■■□□ 2.55
SCAMP4-210ENST00000588555 SPON1Q9HCB6 807 aa31.01■■■□□ 2.55
SCAMP4-210ENST00000588555 GSTO1P78417 241 aa31■■■□□ 2.55
SCAMP4-210ENST00000588555 DIXDC1Q155Q3 683 aa31■■■□□ 2.55
SCAMP4-210ENST00000588555 IMMTQ16891 758 aaKnown RBP31■■■□□ 2.55
SCAMP4-210ENST00000588555 RUFY3Q7L099 469 aa31■■■□□ 2.55
SCAMP4-210ENST00000588555 CERS5Q8N5B7 392 aa31■■■□□ 2.55
SCAMP4-210ENST00000588555 SUGT1Q9Y2Z0 365 aa31■■■□□ 2.55
SCAMP4-210ENST00000588555 MYH2Q9UKX2 1941 aa31■■■□□ 2.55
SCAMP4-210ENST00000588555 KCNQ5Q9NR82 932 aa31■■■□□ 2.55
SCAMP4-210ENST00000588555 CYP46A1Q9Y6A2 500 aa31■■■□□ 2.55
SCAMP4-210ENST00000588555 PPIP5K2O43314 1243 aa30.99■■■□□ 2.55
SCAMP4-210ENST00000588555 AATFQ9NY61 560 aaKnown RBP eCLIP30.99■■■□□ 2.55
SCAMP4-210ENST00000588555 FER1L6Q2WGJ9 1857 aa30.98■■■□□ 2.55
SCAMP4-210ENST00000588555 MROH7-TTC4A0A0A0MT08 1334 aa30.98■■■□□ 2.55
SCAMP4-210ENST00000588555 E7EWF7 191 aa30.97■■■□□ 2.55
SCAMP4-210ENST00000588555 HAND2P61296 217 aa30.97■■■□□ 2.55
SCAMP4-210ENST00000588555 NEK1Q96PY6 1258 aa30.97■■■□□ 2.55
SCAMP4-210ENST00000588555 MCM2P49736 904 aa30.97■■■□□ 2.55
SCAMP4-210ENST00000588555 BLOC1S2Q6QNY1 142 aa30.97■■■□□ 2.55
SCAMP4-210ENST00000588555 SDR42E1Q8WUS8 393 aa30.97■■■□□ 2.55
SCAMP4-210ENST00000588555 FBXW7Q969H0 707 aa30.97■■■□□ 2.55
SCAMP4-210ENST00000588555 NBPF3Q9H094 633 aa30.97■■■□□ 2.55
SCAMP4-210ENST00000588555 COL4A5P29400 1685 aa30.96■■■□□ 2.55
SCAMP4-210ENST00000588555 LDHCP07864 332 aa30.96■■■□□ 2.55
SCAMP4-210ENST00000588555 STRIP1Q5VSL9 837 aa30.96■■■□□ 2.55
SCAMP4-210ENST00000588555 FAM163AQ96GL9 167 aaPredicted RBP30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms