RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 F8W031 263 aaPredicted RBP11.01□□□□□ -0.65
CIRBP-218ENST00000588344 MAP4K4O95819 1239 aaPredicted RBP11.01□□□□□ -0.65
CIRBP-218ENST00000588344 ZSCAN25Q6NSZ9 544 aa11.01□□□□□ -0.65
CIRBP-218ENST00000588344 LDHDQ86WU2 507 aa11.01□□□□□ -0.65
CIRBP-218ENST00000588344 CERS3Q8IU89 383 aa11.01□□□□□ -0.65
CIRBP-218ENST00000588344 ZDHHC15Q96MV8 337 aa11.01□□□□□ -0.65
CIRBP-218ENST00000588344 MXD3Q9BW11 206 aa11.01□□□□□ -0.65
CIRBP-218ENST00000588344 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.01□□□□□ -0.651e-7■■□□□ 14.2
CIRBP-218ENST00000588344 NMRK2Q9NPI5 230 aa11.01□□□□□ -0.65
CIRBP-218ENST00000588344 SNRKQ9NRH2 765 aa11.01□□□□□ -0.65
CIRBP-218ENST00000588344 PAG1Q9NWQ8 432 aa11.01□□□□□ -0.65
CIRBP-218ENST00000588344 RAI14Q9P0K7 980 aa11.01□□□□□ -0.65
CIRBP-218ENST00000588344 PGAP2Q9UHJ9 254 aa11.01□□□□□ -0.65
CIRBP-218ENST00000588344 ZFYP08048 801 aaPredicted RBP11□□□□□ -0.65
CIRBP-218ENST00000588344 PRDX5P30044 214 aa11□□□□□ -0.65
CIRBP-218ENST00000588344 CRKP46108 304 aa11□□□□□ -0.65
CIRBP-218ENST00000588344 RBM5P52756 815 aaKnown RBP eCLIP11□□□□□ -0.652e-12■□□□□ 8.3
CIRBP-218ENST00000588344 KIF4BQ2VIQ3 1234 aa11□□□□□ -0.65
CIRBP-218ENST00000588344 CFAP100Q494V2 611 aa11□□□□□ -0.65
CIRBP-218ENST00000588344 TBC1D10BQ4KMP7 808 aaPredicted RBP11□□□□□ -0.65
CIRBP-218ENST00000588344 PLEKHM2Q8IWE5 1019 aa11□□□□□ -0.65
CIRBP-218ENST00000588344 PI4K2BQ8TCG2 481 aa11□□□□□ -0.65
CIRBP-218ENST00000588344 DNAJC2Q99543 621 aaKnown RBP11□□□□□ -0.65
CIRBP-218ENST00000588344 CHD4Q14839 1912 aa10.99□□□□□ -0.65
CIRBP-218ENST00000588344 DICER1Q9UPY3 1922 aaKnown RBP10.99□□□□□ -0.65
CIRBP-218ENST00000588344 SPDYE2BA6NHP3 402 aa10.99□□□□□ -0.65
CIRBP-218ENST00000588344 GOLIM4O00461 696 aa10.99□□□□□ -0.65
CIRBP-218ENST00000588344 IDH1O75874 414 aaKnown RBP10.99□□□□□ -0.65
CIRBP-218ENST00000588344 TOMM70O94826 608 aa10.99□□□□□ -0.65
CIRBP-218ENST00000588344 BAG3O95817 575 aa10.99□□□□□ -0.65
CIRBP-218ENST00000588344 SPDYE6P0CI01 402 aa10.99□□□□□ -0.65
CIRBP-218ENST00000588344 MECOMQ03112 1051 aa10.99□□□□□ -0.65
CIRBP-218ENST00000588344 EAPPQ56P03 285 aaPredicted RBP10.99□□□□□ -0.65
CIRBP-218ENST00000588344 RBM26Q5T8P6 1007 aaKnown RBP10.99□□□□□ -0.65
CIRBP-218ENST00000588344 NAA16Q6N069 864 aaPredicted RBP10.99□□□□□ -0.65
CIRBP-218ENST00000588344 PI16Q6UXB8 463 aa10.99□□□□□ -0.65
CIRBP-218ENST00000588344 TBC1D9Q6ZT07 1266 aa10.99□□□□□ -0.65
CIRBP-218ENST00000588344 SAMD7Q7Z3H4 446 aa10.99□□□□□ -0.65
CIRBP-218ENST00000588344 DCPSQ96C86 337 aaKnown RBP10.99□□□□□ -0.65
CIRBP-218ENST00000588344 NSUN4Q96CB9 384 aaKnown RBP10.99□□□□□ -0.65
CIRBP-218ENST00000588344 EVI5LQ96CN4 794 aa10.99□□□□□ -0.65
CIRBP-218ENST00000588344 NOL10Q9BSC4 688 aaKnown RBP10.99□□□□□ -0.65
CIRBP-218ENST00000588344 CLEC11AQ9Y240 323 aa10.99□□□□□ -0.65
CIRBP-218ENST00000588344 PITPNM2Q9BZ72 1349 aa10.99□□□□□ -0.65
CIRBP-218ENST00000588344 WNT10BO00744 389 aa10.98□□□□□ -0.65
CIRBP-218ENST00000588344 KIF3CO14782 793 aa10.98□□□□□ -0.65
CIRBP-218ENST00000588344 PLCG2P16885 1265 aa10.98□□□□□ -0.65
CIRBP-218ENST00000588344 FSTL1Q12841 308 aa10.98□□□□□ -0.65
CIRBP-218ENST00000588344 SLC9C2Q5TAH2 1124 aa10.98□□□□□ -0.65
CIRBP-218ENST00000588344 CNTROBQ8N137 903 aa10.98□□□□□ -0.65
CIRBP-218ENST00000588344 KBTBD3Q8NAB2 608 aa10.98□□□□□ -0.65
CIRBP-218ENST00000588344 SMC1BQ8NDV3 1235 aa10.98□□□□□ -0.65
CIRBP-218ENST00000588344 RBM46Q8TBY0 533 aaKnown RBP10.98□□□□□ -0.65
CIRBP-218ENST00000588344 OTUD7AQ8TE49 926 aaPredicted RBP10.98□□□□□ -0.65
CIRBP-218ENST00000588344 ZBED3Q96IU2 234 aaPredicted RBP10.98□□□□□ -0.65
CIRBP-218ENST00000588344 WDR90Q96KV7 1748 aa10.98□□□□□ -0.65
CIRBP-218ENST00000588344 GPR75-ASB3A0A0A6YYF3 556 aa10.97□□□□□ -0.65
CIRBP-218ENST00000588344 HIRAP54198 1017 aaPredicted RBP10.97□□□□□ -0.65
CIRBP-218ENST00000588344 PPP4CP60510 307 aa10.97□□□□□ -0.65
CIRBP-218ENST00000588344 TNFAIP1Q13829 316 aa10.97□□□□□ -0.65
CIRBP-218ENST00000588344 GRIK5Q16478 980 aa10.97□□□□□ -0.65
CIRBP-218ENST00000588344 FKBP1CQ5VVH2 108 aa10.97□□□□□ -0.65
CIRBP-218ENST00000588344 APOBEC3HQ6NTF7 200 aaKnown RBP10.97□□□□□ -0.65
CIRBP-218ENST00000588344 CHADLQ6NUI6 762 aa10.97□□□□□ -0.65
CIRBP-218ENST00000588344 CDC37L1Q7L3B6 337 aa10.97□□□□□ -0.65
CIRBP-218ENST00000588344 APOBEC3FQ8IUX4 373 aaKnown RBP10.97□□□□□ -0.65
CIRBP-218ENST00000588344 TRPM4Q8TD43 1214 aa10.97□□□□□ -0.65
CIRBP-218ENST00000588344 PRMT6Q96LA8 375 aaPredicted RBP10.97□□□□□ -0.65
CIRBP-218ENST00000588344 ANTXR1Q9H6X2 564 aa10.97□□□□□ -0.65
CIRBP-218ENST00000588344 PIH1D3Q9NQM4 214 aaKnown RBP10.97□□□□□ -0.65
CIRBP-218ENST00000588344 TMOD2Q9NZR1 351 aa10.97□□□□□ -0.65
CIRBP-218ENST00000588344 MROH7-TTC4A0A0A0MT08 1334 aa10.97□□□□□ -0.65
CIRBP-218ENST00000588344 GAKO14976 1311 aa10.97□□□□□ -0.65
CIRBP-218ENST00000588344 COL1A1P02452 1464 aaPredicted RBP10.97□□□□□ -0.65
CIRBP-218ENST00000588344 A0A1B0GUL6 1792 aa10.97□□□□□ -0.65
CIRBP-218ENST00000588344 TIAM2Q8IVF5 1701 aa10.96□□□□□ -0.65
CIRBP-218ENST00000588344 SHTN1A0MZ66 631 aa10.96□□□□□ -0.65
CIRBP-218ENST00000588344 CYP7A1P22680 504 aa10.96□□□□□ -0.65
CIRBP-218ENST00000588344 TNNI2P48788 182 aa10.96□□□□□ -0.65
CIRBP-218ENST00000588344 UBE3CQ15386 1083 aa10.96□□□□□ -0.65
CIRBP-218ENST00000588344 NBPF9Q3BBW0 867 aa10.96□□□□□ -0.65
CIRBP-218ENST00000588344 TSHZ3Q63HK5 1081 aa10.96□□□□□ -0.65
CIRBP-218ENST00000588344 SULF1Q8IWU6 871 aa10.96□□□□□ -0.65
CIRBP-218ENST00000588344 DAGLAQ9Y4D2 1042 aa10.96□□□□□ -0.65
CIRBP-218ENST00000588344 PPP2R3BQ9Y5P8 575 aa10.96□□□□□ -0.65
CIRBP-218ENST00000588344 ARAP2Q8WZ64 1704 aa10.95□□□□□ -0.66
CIRBP-218ENST00000588344 TRIM6-TRIM34B2RNG4 842 aa10.95□□□□□ -0.66
CIRBP-218ENST00000588344 HIP1O00291 1037 aa10.95□□□□□ -0.66
CIRBP-218ENST00000588344 RNF113AO15541 343 aaKnown RBP10.95□□□□□ -0.66
CIRBP-218ENST00000588344 NPM3O75607 178 aaKnown RBP10.95□□□□□ -0.66
CIRBP-218ENST00000588344 EGFRP00533 1210 aa10.95□□□□□ -0.66
CIRBP-218ENST00000588344 PDE6AP16499 860 aa10.95□□□□□ -0.66
CIRBP-218ENST00000588344 PDE4AP27815 886 aa10.95□□□□□ -0.66
CIRBP-218ENST00000588344 ADD2P35612 726 aa10.95□□□□□ -0.66
CIRBP-218ENST00000588344 DIXDC1Q155Q3 683 aa10.95□□□□□ -0.66
CIRBP-218ENST00000588344 SPDYE2Q495Y8 402 aa10.95□□□□□ -0.66
CIRBP-218ENST00000588344 PIAS4Q8N2W9 510 aaPredicted RBP10.95□□□□□ -0.66
CIRBP-218ENST00000588344 MAGEB6Q8N7X4 407 aa10.95□□□□□ -0.66
CIRBP-218ENST00000588344 HOOK2Q96ED9 719 aa10.95□□□□□ -0.66
CIRBP-218ENST00000588344 FSD1Q9BTV5 496 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms