RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 ANKRD13AQ8IZ07 590 aa19.99■□□□□ 0.79
ERCC1-206ENST00000588300 VGLL2Q8N8G2 317 aa19.99■□□□□ 0.79
ERCC1-206ENST00000588300 TBC1D22AQ8WUA7 517 aa19.99■□□□□ 0.79
ERCC1-206ENST00000588300 USP44Q9H0E7 712 aa19.99■□□□□ 0.79
ERCC1-206ENST00000588300 IQSEC3Q9UPP2 1182 aaPredicted RBP19.99■□□□□ 0.79
ERCC1-206ENST00000588300 CHAF1AQ13111 956 aaPredicted RBP19.98■□□□□ 0.79
ERCC1-206ENST00000588300 ALDH1L2Q3SY69 923 aa19.98■□□□□ 0.79
ERCC1-206ENST00000588300 R3HDMLQ9H3Y0 253 aa19.98■□□□□ 0.79
ERCC1-206ENST00000588300 TNNI2P48788 182 aa19.97■□□□□ 0.79
ERCC1-206ENST00000588300 KLHDC4Q8TBB5 520 aa19.97■□□□□ 0.79
ERCC1-206ENST00000588300 MYH13Q9UKX3 1938 aa19.96■□□□□ 0.79
ERCC1-206ENST00000588300 TCP10L2B9ZVM9 353 aa19.96■□□□□ 0.79
ERCC1-206ENST00000588300 HDLBPQ00341 1268 aaKnown RBP19.96■□□□□ 0.79
ERCC1-206ENST00000588300 FBXO46Q6PJ61 603 aaPredicted RBP19.96■□□□□ 0.79
ERCC1-206ENST00000588300 KIF16BQ96L93 1317 aa19.96■□□□□ 0.79
ERCC1-206ENST00000588300 IGF2BP3O00425 579 aaKnown RBP eCLIP19.95■□□□□ 0.78
ERCC1-206ENST00000588300 IFIT1P09914 478 aaKnown RBP19.95■□□□□ 0.78
ERCC1-206ENST00000588300 PUM3Q15397 648 aaKnown RBP19.95■□□□□ 0.78
ERCC1-206ENST00000588300 GRIK5Q16478 980 aa19.95■□□□□ 0.78
ERCC1-206ENST00000588300 OTUD7BQ6GQQ9 843 aa19.95■□□□□ 0.78
ERCC1-206ENST00000588300 TEKT1Q969V4 418 aa19.95■□□□□ 0.78
ERCC1-206ENST00000588300 TEPSINQ96N21 525 aa19.95■□□□□ 0.78
ERCC1-206ENST00000588300 SMC4Q9NTJ3 1288 aa19.95■□□□□ 0.78
ERCC1-206ENST00000588300 TNRC18O15417 2968 aaPredicted RBP19.94■□□□□ 0.78
ERCC1-206ENST00000588300 GJA5P36382 358 aa19.94■□□□□ 0.78
ERCC1-206ENST00000588300 BCAMP50895 628 aa19.94■□□□□ 0.78
ERCC1-206ENST00000588300 TMEM39BQ9GZU3 492 aa19.94■□□□□ 0.78
ERCC1-206ENST00000588300 ELP3Q9H9T3 547 aa19.94■□□□□ 0.78
ERCC1-206ENST00000588300 MAST3O60307 1309 aa19.94■□□□□ 0.78
ERCC1-206ENST00000588300 EYA2O00167 538 aa19.93■□□□□ 0.78
ERCC1-206ENST00000588300 FGFR2P21802 821 aa19.93■□□□□ 0.78
ERCC1-206ENST00000588300 CDAN1Q8IWY9 1227 aa19.93■□□□□ 0.78
ERCC1-206ENST00000588300 CDCA7LQ96GN5 454 aa19.93■□□□□ 0.78
ERCC1-206ENST00000588300 SUGT1Q9Y2Z0 365 aa19.93■□□□□ 0.78
ERCC1-206ENST00000588300 SLC5A1P13866 664 aa19.92■□□□□ 0.78
ERCC1-206ENST00000588300 RFX5P48382 616 aaPredicted RBP19.92■□□□□ 0.78
ERCC1-206ENST00000588300 OPTNQ96CV9 577 aa19.92■□□□□ 0.78
ERCC1-206ENST00000588300 MRIQ9BWK5 157 aa19.92■□□□□ 0.78
ERCC1-206ENST00000588300 TMOD2Q9NZR1 351 aa19.92■□□□□ 0.78
ERCC1-206ENST00000588300 TESPA1A2RU30 521 aaPredicted RBP19.91■□□□□ 0.78
ERCC1-206ENST00000588300 CT47B1P0C2W7 299 aaPredicted RBP19.91■□□□□ 0.78
ERCC1-206ENST00000588300 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.91■□□□□ 0.78
ERCC1-206ENST00000588300 LPIN2Q92539 896 aa19.91■□□□□ 0.78
ERCC1-206ENST00000588300 ZDHHC15Q96MV8 337 aa19.91■□□□□ 0.78
ERCC1-206ENST00000588300 PDE4DIPQ5VU43 2346 aa19.9■□□□□ 0.78
ERCC1-206ENST00000588300 UBTFL1P0CB47 393 aaPredicted RBP19.9■□□□□ 0.78
ERCC1-206ENST00000588300 MAP3K9P80192 1104 aa19.9■□□□□ 0.78
ERCC1-206ENST00000588300 CRHR2Q13324 411 aa19.9■□□□□ 0.78
ERCC1-206ENST00000588300 TRMT2AQ8IZ69 625 aaKnown RBP19.9■□□□□ 0.78
ERCC1-206ENST00000588300 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.9■□□□□ 0.78
ERCC1-206ENST00000588300 TRIM17Q9Y577 477 aa19.9■□□□□ 0.78
ERCC1-206ENST00000588300 CSADQ9Y600 493 aa19.9■□□□□ 0.78
ERCC1-206ENST00000588300 CACNB3P54284 484 aa19.89■□□□□ 0.77
ERCC1-206ENST00000588300 VGLL4Q14135 290 aa19.89■□□□□ 0.77
ERCC1-206ENST00000588300 WDR66Q8TBY9 1149 aa19.89■□□□□ 0.77
ERCC1-206ENST00000588300 ERO1AQ96HE7 468 aa19.89■□□□□ 0.77
ERCC1-206ENST00000588300 PTPN18Q99952 460 aa19.89■□□□□ 0.77
ERCC1-206ENST00000588300 FBXO3Q9UK99 471 aa19.89■□□□□ 0.77
ERCC1-206ENST00000588300 FKBP1CQ5VVH2 108 aa19.88■□□□□ 0.77
ERCC1-206ENST00000588300 APOBEC3HQ6NTF7 200 aaKnown RBP19.88■□□□□ 0.77
ERCC1-206ENST00000588300 HHIPL2Q6UWX4 724 aa19.88■□□□□ 0.77
ERCC1-206ENST00000588300 OTOP1Q7RTM1 612 aa19.88■□□□□ 0.77
ERCC1-206ENST00000588300 ATG9AQ7Z3C6 839 aa19.88■□□□□ 0.77
ERCC1-206ENST00000588300 FAM83AQ86UY5 434 aa19.88■□□□□ 0.77
ERCC1-206ENST00000588300 HOOK2Q96ED9 719 aa19.88■□□□□ 0.77
ERCC1-206ENST00000588300 RPAP1Q9BWH6 1393 aaPredicted RBP19.87■□□□□ 0.77
ERCC1-206ENST00000588300 GTF2A2P52657 109 aa19.87■□□□□ 0.77
ERCC1-206ENST00000588300 CNKSR2Q8WXI2 1034 aa19.87■□□□□ 0.77
ERCC1-206ENST00000588300 MS4A4AQ96JQ5 239 aa19.87■□□□□ 0.77
ERCC1-206ENST00000588300 API5Q9BZZ5 524 aaKnown RBP19.87■□□□□ 0.77
ERCC1-206ENST00000588300 SIL1Q9H173 461 aa19.87■□□□□ 0.77
ERCC1-206ENST00000588300 NOB1Q9ULX3 412 aaKnown RBP19.87■□□□□ 0.77
ERCC1-206ENST00000588300 HDAC5Q9UQL6 1122 aa19.87■□□□□ 0.77
ERCC1-206ENST00000588300 CCL15-CCL14A0A0B4J2E2 113 aa19.86■□□□□ 0.77
ERCC1-206ENST00000588300 CIAO1O76071 339 aa19.86■□□□□ 0.77
ERCC1-206ENST00000588300 CCL15Q16663 113 aa19.86■□□□□ 0.77
ERCC1-206ENST00000588300 CD99L2Q8TCZ2 262 aa19.86■□□□□ 0.77
ERCC1-206ENST00000588300 OTUD5Q96G74 571 aa19.86■□□□□ 0.77
ERCC1-206ENST00000588300 CEP126Q9P2H0 1117 aa19.86■□□□□ 0.77
ERCC1-206ENST00000588300 SLC34A2O95436 690 aa19.85■□□□□ 0.77
ERCC1-206ENST00000588300 SP3Q02447 781 aa19.85■□□□□ 0.77
ERCC1-206ENST00000588300 ATP2B3Q16720 1220 aa19.85■□□□□ 0.77
ERCC1-206ENST00000588300 BRI3BPQ8WY22 251 aa19.85■□□□□ 0.77
ERCC1-206ENST00000588300 WRNIP1Q96S55 665 aa19.85■□□□□ 0.77
ERCC1-206ENST00000588300 GNL3LQ9NVN8 582 aaKnown RBP19.85■□□□□ 0.77
ERCC1-206ENST00000588300 SPDYE5A6NIY4 337 aa19.84■□□□□ 0.77
ERCC1-206ENST00000588300 TAF1CQ15572 869 aaPredicted RBP19.84■□□□□ 0.77
ERCC1-206ENST00000588300 DCAF15Q66K64 600 aa19.84■□□□□ 0.77
ERCC1-206ENST00000588300 LRRFIP2Q9Y608 721 aaKnown RBP19.84■□□□□ 0.77
ERCC1-206ENST00000588300 SNCAIPQ9Y6H5 919 aa19.84■□□□□ 0.77
ERCC1-206ENST00000588300 IL15P40933 162 aaPredicted RBP19.83■□□□□ 0.77
ERCC1-206ENST00000588300 ERO1BQ86YB8 467 aa19.83■□□□□ 0.77
ERCC1-206ENST00000588300 EFCC1Q9HA90 598 aa19.83■□□□□ 0.77
ERCC1-206ENST00000588300 ZFYVE28Q9HCC9 887 aa19.83■□□□□ 0.77
ERCC1-206ENST00000588300 PTPN22Q9Y2R2 807 aa19.83■□□□□ 0.77
ERCC1-206ENST00000588300 INTS3Q68E01 1043 aaKnown RBP19.82■□□□□ 0.76
ERCC1-206ENST00000588300 DAGLAQ9Y4D2 1042 aa19.82■□□□□ 0.76
ERCC1-206ENST00000588300 AK9Q5TCS8 1911 aa19.81■□□□□ 0.76
ERCC1-206ENST00000588300 CCER2I3L3R5 266 aa19.81■□□□□ 0.76
ERCC1-206ENST00000588300 SEMA3EO15041 775 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms