RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 METTL22Q9BUU2 404 aaPredicted RBP6.98□□□□□ -1.29
SDF2-206ENST00000587788 USP26Q9BXU7 913 aa6.98□□□□□ -1.29
SDF2-206ENST00000587788 USP44Q9H0E7 712 aa6.98□□□□□ -1.29
SDF2-206ENST00000587788 NARFQ9UHQ1 456 aa6.98□□□□□ -1.29
SDF2-206ENST00000587788 DDX60Q8IY21 1712 aaKnown RBP6.98□□□□□ -1.29
SDF2-206ENST00000587788 TAF1P21675 1872 aa6.98□□□□□ -1.29
SDF2-206ENST00000587788 CARMIL3Q8ND23 1372 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 A0A087WZG4 1122 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 POM121CA8CG34 1229 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 ERVV-1B6SEH8 477 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 POLRMTO00411 1230 aaKnown RBP6.97□□□□□ -1.29
SDF2-206ENST00000587788 CAMTA2O94983 1202 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 F12P00748 615 aaPredicted RBP6.97□□□□□ -1.29
SDF2-206ENST00000587788 JUNDP17535 347 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 MX1P20591 662 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 TM4SF1P30408 202 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 MCM4P33991 863 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 DDIT3P35638 169 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 MCM2P49736 904 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 ANAPC15P60006 121 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 AIMP1Q12904 312 aaKnown RBP6.97□□□□□ -1.29
SDF2-206ENST00000587788 NFIXQ14938 502 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 SKOR2Q2VWA4 1001 aaPredicted RBP6.97□□□□□ -1.29
SDF2-206ENST00000587788 HSP90AB3PQ58FF7 597 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 L1TD1Q5T7N2 865 aaKnown RBP6.97□□□□□ -1.29
SDF2-206ENST00000587788 ERC1Q8IUD2 1116 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 C16orf71Q8IYS4 520 aaPredicted RBP6.97□□□□□ -1.29
SDF2-206ENST00000587788 NLGN1Q8N2Q7 840 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 XAGE3Q8WTP9 111 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 TSC1Q92574 1164 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 CWC22Q9HCG8 908 aaKnown RBP6.97□□□□□ -1.29
SDF2-206ENST00000587788 C9orf78Q9NZ63 289 aaPredicted RBP6.97□□□□□ -1.29
SDF2-206ENST00000587788 WWC3Q9ULE0 1092 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 ISY1Q9ULR0 285 aaKnown RBP6.97□□□□□ -1.29
SDF2-206ENST00000587788 MAP3K2Q9Y2U5 619 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 SALL3Q9BXA9 1300 aa6.97□□□□□ -1.29
SDF2-206ENST00000587788 GOLGB1Q14789 3259 aaKnown RBP6.96□□□□□ -1.29
SDF2-206ENST00000587788 ZPR1O75312 459 aa6.96□□□□□ -1.3
SDF2-206ENST00000587788 ANXA1P04083 346 aa6.96□□□□□ -1.3
SDF2-206ENST00000587788 HSP90B1P14625 803 aaKnown RBP6.96□□□□□ -1.3
SDF2-206ENST00000587788 YBX3P16989 372 aaKnown RBP eCLIP6.96□□□□□ -1.31e-6■□□□□ 8.7
SDF2-206ENST00000587788 MTX1Q13505 466 aa6.96□□□□□ -1.3
SDF2-206ENST00000587788 PROSER3Q2NL68 480 aa6.96□□□□□ -1.3
SDF2-206ENST00000587788 TBC1D9BQ66K14 1250 aa6.96□□□□□ -1.3
SDF2-206ENST00000587788 POTEGQ6S5H5 508 aa6.96□□□□□ -1.3
SDF2-206ENST00000587788 LRP10Q7Z4F1 713 aa6.96□□□□□ -1.3
SDF2-206ENST00000587788 DZIP3Q86Y13 1208 aaKnown RBP6.96□□□□□ -1.3
SDF2-206ENST00000587788 CCDC191Q8NCU4 936 aa6.96□□□□□ -1.3
SDF2-206ENST00000587788 KCTD12Q96CX2 325 aaKnown RBP6.96□□□□□ -1.3
SDF2-206ENST00000587788 KIF1BPQ96EK5 621 aa6.96□□□□□ -1.3
SDF2-206ENST00000587788 SERPINA10Q9UK55 444 aa6.96□□□□□ -1.3
SDF2-206ENST00000587788 LRRFIP2Q9Y608 721 aaKnown RBP6.96□□□□□ -1.3
SDF2-206ENST00000587788 SLX4Q8IY92 1834 aa6.96□□□□□ -1.3
SDF2-206ENST00000587788 FER1L6Q2WGJ9 1857 aa6.96□□□□□ -1.3
SDF2-206ENST00000587788 GOLGA6L22H0YM25 854 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 SMARCA5O60264 1052 aaPredicted RBP6.95□□□□□ -1.3
SDF2-206ENST00000587788 DXOO77932 396 aaKnown RBP6.95□□□□□ -1.3
SDF2-206ENST00000587788 MMP16P51512 607 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 NUCB2P80303 420 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 TCIRG1Q13488 830 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 NR6A1Q15406 480 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 HLFQ16534 295 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 PTPRNQ16849 979 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 WASHC4Q2M389 1173 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 CLEC4GQ6UXB4 293 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 KIF6Q6ZMV9 814 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 BICDL1Q6ZP65 573 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 CLEC17AQ6ZS10 378 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 TTLL7Q6ZT98 887 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 CDAN1Q8IWY9 1227 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 CCDC24Q8N4L8 307 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 FAM160A2Q8N612 972 aaPredicted RBP6.95□□□□□ -1.3
SDF2-206ENST00000587788 ADAMTS19Q8TE59 1207 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 IL17RAQ96F46 866 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 ARID3AQ99856 593 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 CD2APQ9Y5K6 639 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 PARP3Q9Y6F1 533 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 UTYO14607 1347 aa6.95□□□□□ -1.3
SDF2-206ENST00000587788 SPEF2Q9C093 1822 aa6.94□□□□□ -1.3
SDF2-206ENST00000587788 UTRNP46939 3433 aa6.94□□□□□ -1.3
SDF2-206ENST00000587788 MYH3P11055 1940 aa6.94□□□□□ -1.3
SDF2-206ENST00000587788 DICER1Q9UPY3 1922 aaKnown RBP6.94□□□□□ -1.3
SDF2-206ENST00000587788 TIAM2Q8IVF5 1701 aa6.94□□□□□ -1.3
SDF2-206ENST00000587788 PNMA6EA0A0J9YXQ4 647 aa6.94□□□□□ -1.3
SDF2-206ENST00000587788 SRGAP3O43295 1099 aa6.94□□□□□ -1.3
SDF2-206ENST00000587788 SURF6O75683 361 aaKnown RBP6.94□□□□□ -1.3
SDF2-206ENST00000587788 GCKRQ14397 625 aa6.94□□□□□ -1.3
SDF2-206ENST00000587788 RAB3GAP1Q15042 981 aa6.94□□□□□ -1.3
SDF2-206ENST00000587788 PPP1R42Q7Z4L9 355 aa6.94□□□□□ -1.3
SDF2-206ENST00000587788 OTUD7AQ8TE49 926 aaPredicted RBP6.94□□□□□ -1.3
SDF2-206ENST00000587788 GLMNQ92990 594 aa6.94□□□□□ -1.3
SDF2-206ENST00000587788 GPATCH3Q96I76 525 aa6.94□□□□□ -1.3
SDF2-206ENST00000587788 ESYT1Q9BSJ8 1104 aa6.94□□□□□ -1.3
SDF2-206ENST00000587788 EXOC6BQ9Y2D4 811 aa6.94□□□□□ -1.3
SDF2-206ENST00000587788 TTC41PQ6P2S7 1318 aa6.94□□□□□ -1.3
SDF2-206ENST00000587788 A0A0G2JLW4 131 aa6.93□□□□□ -1.3
SDF2-206ENST00000587788 NEURL1BA8MQ27 555 aa6.93□□□□□ -1.3
SDF2-206ENST00000587788 H7C1W4 665 aa6.93□□□□□ -1.3
SDF2-206ENST00000587788 GRM8O00222 908 aa6.93□□□□□ -1.3
SDF2-206ENST00000587788 GLRX3O76003 335 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms