RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 TTF1Q15361 905 aaPredicted RBP21.56■■□□□ 1.04
DDX39A-206ENST00000587730 SLFNL1Q499Z3 407 aa21.56■■□□□ 1.04
DDX39A-206ENST00000587730 ANO1Q5XXA6 986 aa21.56■■□□□ 1.04
DDX39A-206ENST00000587730 FILIP1Q7Z7B0 1213 aa21.56■■□□□ 1.04
DDX39A-206ENST00000587730 CCDC9Q9Y3X0 531 aaKnown RBP21.56■■□□□ 1.04
DDX39A-206ENST00000587730 TNS2Q63HR2 1409 aa21.56■■□□□ 1.04
DDX39A-206ENST00000587730 PAPPAQ13219 1627 aa21.56■■□□□ 1.04
DDX39A-206ENST00000587730 CBX1P83916 185 aa21.55■■□□□ 1.04
DDX39A-206ENST00000587730 GUCY1B3Q02153 619 aa21.55■■□□□ 1.04
DDX39A-206ENST00000587730 TCIRG1Q13488 830 aa21.55■■□□□ 1.04
DDX39A-206ENST00000587730 ATP2B3Q16720 1220 aa21.55■■□□□ 1.04
DDX39A-206ENST00000587730 XAGE2Q96GT9 111 aa21.55■■□□□ 1.04
DDX39A-206ENST00000587730 TEX13AQ9BXU3 409 aaPredicted RBP21.55■■□□□ 1.04
DDX39A-206ENST00000587730 FAM177BA6PVY3 158 aa21.55■■□□□ 1.04
DDX39A-206ENST00000587730 FGAP02671 866 aa21.55■■□□□ 1.04
DDX39A-206ENST00000587730 SPATA31A3Q5VYP0 1347 aa21.54■■□□□ 1.04
DDX39A-206ENST00000587730 A0A1B0GVL5 298 aa21.54■■□□□ 1.04
DDX39A-206ENST00000587730 CBFA2T2O43439 604 aa21.54■■□□□ 1.04
DDX39A-206ENST00000587730 PPP6R2O75170 966 aa21.54■■□□□ 1.04
DDX39A-206ENST00000587730 KIF20AO95235 890 aa21.54■■□□□ 1.04
DDX39A-206ENST00000587730 PCCAP05165 728 aaPredicted RBP21.54■■□□□ 1.04
DDX39A-206ENST00000587730 ZNF397Q8NF99 534 aaPredicted RBP21.54■■□□□ 1.04
DDX39A-206ENST00000587730 HPS5Q9UPZ3 1129 aa21.54■■□□□ 1.04
DDX39A-206ENST00000587730 ATRNO75882 1429 aa21.53■■□□□ 1.04
DDX39A-206ENST00000587730 ZMYM6O95789 1325 aa21.53■■□□□ 1.04
DDX39A-206ENST00000587730 WDR17Q8IZU2 1322 aa21.53■■□□□ 1.04
DDX39A-206ENST00000587730 ZNF202O95125 648 aa21.53■■□□□ 1.04
DDX39A-206ENST00000587730 SFPQP23246 707 aaKnown RBP eCLIP21.53■■□□□ 1.04
DDX39A-206ENST00000587730 KIF23Q02241 960 aaPredicted RBP21.53■■□□□ 1.04
DDX39A-206ENST00000587730 SLC39A14Q15043 492 aa21.53■■□□□ 1.04
DDX39A-206ENST00000587730 TAF7LQ5H9L4 462 aa21.53■■□□□ 1.04
DDX39A-206ENST00000587730 TTLL5Q6EMB2 1281 aa21.53■■□□□ 1.04
DDX39A-206ENST00000587730 CLIC4Q9Y696 253 aa21.53■■□□□ 1.04
DDX39A-206ENST00000587730 NHSL1Q5SYE7 1610 aa21.53■■□□□ 1.04
DDX39A-206ENST00000587730 ZBTB3Q9H5J0 574 aa21.52■■□□□ 1.04
DDX39A-206ENST00000587730 FAM237AA0A1B0GTK4 181 aa21.52■■□□□ 1.04
DDX39A-206ENST00000587730 GABPB1Q06547 395 aaPredicted RBP21.52■■□□□ 1.04
DDX39A-206ENST00000587730 IFIT5Q13325 482 aaKnown RBP21.52■■□□□ 1.04
DDX39A-206ENST00000587730 CHST3Q7LGC8 479 aa21.52■■□□□ 1.04
DDX39A-206ENST00000587730 ELOA2Q8IYF1 753 aaPredicted RBP21.52■■□□□ 1.04
DDX39A-206ENST00000587730 ZNF592Q92610 1267 aa21.52■■□□□ 1.04
DDX39A-206ENST00000587730 ZNF594Q96JF6 807 aaPredicted RBP21.52■■□□□ 1.04
DDX39A-206ENST00000587730 ANGEL1Q9UNK9 670 aaKnown RBP21.52■■□□□ 1.04
DDX39A-206ENST00000587730 DDX60Q8IY21 1712 aaKnown RBP21.51■■□□□ 1.03
DDX39A-206ENST00000587730 CSF1RP07333 972 aa21.51■■□□□ 1.03
DDX39A-206ENST00000587730 NBPF11Q86T75 865 aa21.51■■□□□ 1.03
DDX39A-206ENST00000587730 TMEM87BQ96K49 555 aa21.51■■□□□ 1.03
DDX39A-206ENST00000587730 NOL10Q9BSC4 688 aaKnown RBP21.51■■□□□ 1.03
DDX39A-206ENST00000587730 CDHR2Q9BYE9 1310 aa21.51■■□□□ 1.03
DDX39A-206ENST00000587730 FOXP2O15409 715 aa21.5■■□□□ 1.03
DDX39A-206ENST00000587730 GPAA1O43292 621 aa21.5■■□□□ 1.03
DDX39A-206ENST00000587730 SMC2O95347 1197 aa21.5■■□□□ 1.03
DDX39A-206ENST00000587730 SLU7O95391 586 aaKnown RBP21.5■■□□□ 1.03
DDX39A-206ENST00000587730 A1BGP04217 495 aa21.5■■□□□ 1.03
DDX39A-206ENST00000587730 U2AF2P26368 475 aaKnown RBP eCLIP21.5■■□□□ 1.03
DDX39A-206ENST00000587730 CHRNA2Q15822 529 aa21.5■■□□□ 1.03
DDX39A-206ENST00000587730 DPCR1Q3MIW9 517 aa21.5■■□□□ 1.03
DDX39A-206ENST00000587730 AXDND1Q5T1B0 1012 aaPredicted RBP21.5■■□□□ 1.03
DDX39A-206ENST00000587730 KIF6Q6ZMV9 814 aa21.5■■□□□ 1.03
DDX39A-206ENST00000587730 DDX41Q9UJV9 622 aaKnown RBP21.5■■□□□ 1.03
DDX39A-206ENST00000587730 SOS2Q07890 1332 aaPredicted RBP21.5■■□□□ 1.03
DDX39A-206ENST00000587730 MAP3K15Q6ZN16 1313 aa21.5■■□□□ 1.03
DDX39A-206ENST00000587730 ZBTB38Q8NAP3 1195 aaPredicted RBP21.5■■□□□ 1.03
DDX39A-206ENST00000587730 PUS3Q9BZE2 481 aaKnown RBP21.5■■□□□ 1.03
DDX39A-206ENST00000587730 HOOK1Q9UJC3 728 aaKnown RBP21.5■■□□□ 1.03
DDX39A-206ENST00000587730 TUBE1Q9UJT0 475 aa21.5■■□□□ 1.03
DDX39A-206ENST00000587730 A0A0G2JLW4 131 aa21.49■■□□□ 1.03
DDX39A-206ENST00000587730 POLR3DP05423 398 aaPredicted RBP21.49■■□□□ 1.03
DDX39A-206ENST00000587730 PFKFB1P16118 471 aa21.49■■□□□ 1.03
DDX39A-206ENST00000587730 ANTXR2P58335 489 aa21.49■■□□□ 1.03
DDX39A-206ENST00000587730 UBE3CQ15386 1083 aa21.49■■□□□ 1.03
DDX39A-206ENST00000587730 XPO4Q9C0E2 1151 aaKnown RBP21.49■■□□□ 1.03
DDX39A-206ENST00000587730 MORC2Q9Y6X9 1032 aaPredicted RBP21.49■■□□□ 1.03
DDX39A-206ENST00000587730 NEDD4P46934 1319 aa21.49■■□□□ 1.03
DDX39A-206ENST00000587730 FAM193AP78312 1265 aa21.48■■□□□ 1.03
DDX39A-206ENST00000587730 TRIM29Q14134 588 aa21.48■■□□□ 1.03
DDX39A-206ENST00000587730 ARID5BQ14865 1188 aa21.48■■□□□ 1.03
DDX39A-206ENST00000587730 L2HGDHQ9H9P8 463 aa21.48■■□□□ 1.03
DDX39A-206ENST00000587730 IFNKQ9P0W0 207 aa21.48■■□□□ 1.03
DDX39A-206ENST00000587730 AHDC1Q5TGY3 1603 aaPredicted RBP21.48■■□□□ 1.03
DDX39A-206ENST00000587730 NWD2Q9ULI1 1742 aa21.48■■□□□ 1.03
DDX39A-206ENST00000587730 ZAP70P43403 619 aa21.48■■□□□ 1.03
DDX39A-206ENST00000587730 SYKP43405 635 aa21.48■■□□□ 1.03
DDX39A-206ENST00000587730 METAP2P50579 478 aaKnown RBP eCLIP21.48■■□□□ 1.03
DDX39A-206ENST00000587730 HAND2P61296 217 aa21.48■■□□□ 1.03
DDX39A-206ENST00000587730 HSP90AB3PQ58FF7 597 aa21.48■■□□□ 1.03
DDX39A-206ENST00000587730 FCHSD1Q86WN1 690 aa21.48■■□□□ 1.03
DDX39A-206ENST00000587730 WASF1Q92558 559 aa21.48■■□□□ 1.03
DDX39A-206ENST00000587730 HPSEQ9Y251 543 aa21.48■■□□□ 1.03
DDX39A-206ENST00000587730 PHLPP1O60346 1717 aa21.47■■□□□ 1.03
DDX39A-206ENST00000587730 USP27XA6NNY8 438 aa21.47■■□□□ 1.03
DDX39A-206ENST00000587730 ADD2P35612 726 aa21.47■■□□□ 1.03
DDX39A-206ENST00000587730 TMC6Q7Z403 805 aa21.47■■□□□ 1.03
DDX39A-206ENST00000587730 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.47■■□□□ 1.03
DDX39A-206ENST00000587730 STK36Q9NRP7 1315 aa21.47■■□□□ 1.03
DDX39A-206ENST00000587730 CUTAO60888 179 aa21.46■■□□□ 1.03
DDX39A-206ENST00000587730 ADORA1P30542 326 aa21.46■■□□□ 1.03
DDX39A-206ENST00000587730 GNL2Q13823 731 aaKnown RBP21.46■■□□□ 1.03
DDX39A-206ENST00000587730 ALG1Q9BT22 464 aa21.46■■□□□ 1.03
DDX39A-206ENST00000587730 PUS7LQ9H0K6 701 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms