RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 IKBKEQ14164 716 aa7.8□□□□□ -1.16
ZNF540-204ENST00000586792 FAM26DQ5JW98 314 aa7.8□□□□□ -1.16
ZNF540-204ENST00000586792 CDPF1Q6NVV7 123 aa7.8□□□□□ -1.16
ZNF540-204ENST00000586792 SPOCD1Q6ZMY3 1216 aa7.8□□□□□ -1.16
ZNF540-204ENST00000586792 ZNF438Q7Z4V0 828 aa7.8□□□□□ -1.16
ZNF540-204ENST00000586792 PROSER2Q86WR7 435 aaPredicted RBP7.8□□□□□ -1.16
ZNF540-204ENST00000586792 FNBP4Q8N3X1 1017 aaPredicted RBP7.8□□□□□ -1.16
ZNF540-204ENST00000586792 ABTB2Q8N961 1025 aa7.8□□□□□ -1.16
ZNF540-204ENST00000586792 USP26Q9BXU7 913 aa7.8□□□□□ -1.16
ZNF540-204ENST00000586792 DZANK1Q9NVP4 752 aa7.8□□□□□ -1.16
ZNF540-204ENST00000586792 KANSL3Q9P2N6 904 aa7.8□□□□□ -1.16
ZNF540-204ENST00000586792 SLC5A6Q9Y289 635 aa7.8□□□□□ -1.16
ZNF540-204ENST00000586792 LOC100289279A0A1B0GTE1 492 aa7.79□□□□□ -1.16
ZNF540-204ENST00000586792 KRTAP19-4Q3LI73 84 aa7.79□□□□□ -1.16
ZNF540-204ENST00000586792 STK11IPQ8N1F8 1099 aa7.79□□□□□ -1.16
ZNF540-204ENST00000586792 PMEPA1Q969W9 287 aa7.79□□□□□ -1.16
ZNF540-204ENST00000586792 SOX17Q9H6I2 414 aaPredicted RBP7.79□□□□□ -1.16
ZNF540-204ENST00000586792 STIM2Q9P246 746 aa7.79□□□□□ -1.16
ZNF540-204ENST00000586792 ZC3H7BQ9UGR2 993 aaKnown RBP7.79□□□□□ -1.16
ZNF540-204ENST00000586792 ACIN1Q9UKV3 1341 aaKnown RBP7.78□□□□□ -1.16
ZNF540-204ENST00000586792 FAM170BA6NMN3 283 aa7.78□□□□□ -1.16
ZNF540-204ENST00000586792 SOX1O00570 391 aaPredicted RBP7.78□□□□□ -1.16
ZNF540-204ENST00000586792 PRMT3O60678 531 aa7.78□□□□□ -1.16
ZNF540-204ENST00000586792 DRD2P14416 443 aa7.78□□□□□ -1.16
ZNF540-204ENST00000586792 CES1P23141 567 aa7.78□□□□□ -1.16
ZNF540-204ENST00000586792 MAP7Q14244 749 aa7.78□□□□□ -1.16
ZNF540-204ENST00000586792 PLCL1Q15111 1095 aa7.78□□□□□ -1.16
ZNF540-204ENST00000586792 TPRNQ4KMQ1 711 aa7.78□□□□□ -1.16
ZNF540-204ENST00000586792 KSR1Q8IVT5 923 aa7.78□□□□□ -1.16
ZNF540-204ENST00000586792 TMEM102Q8N9M5 508 aaPredicted RBP7.78□□□□□ -1.16
ZNF540-204ENST00000586792 BSNDQ8WZ55 320 aa7.78□□□□□ -1.16
ZNF540-204ENST00000586792 SLC38A3Q99624 504 aa7.78□□□□□ -1.16
ZNF540-204ENST00000586792 LRRC4CQ9HCJ2 640 aa7.78□□□□□ -1.16
ZNF540-204ENST00000586792 TMEM63CQ9P1W3 806 aa7.78□□□□□ -1.16
ZNF540-204ENST00000586792 ADAMTS12P58397 1594 aa7.78□□□□□ -1.16
ZNF540-204ENST00000586792 ERICH3Q5RHP9 1530 aa7.78□□□□□ -1.16
ZNF540-204ENST00000586792 SOX4Q06945 474 aaPredicted RBP7.77□□□□□ -1.17
ZNF540-204ENST00000586792 C2CD4AQ8NCU7 369 aaPredicted RBP7.77□□□□□ -1.17
ZNF540-204ENST00000586792 NOVA2Q9UNW9 492 aaKnown RBP7.77□□□□□ -1.17
ZNF540-204ENST00000586792 RIMBP3CA6NJZ7 1639 aa7.77□□□□□ -1.17
ZNF540-204ENST00000586792 RIMBP3BA6NNM3 1639 aa7.77□□□□□ -1.17
ZNF540-204ENST00000586792 RIMBP3Q9UFD9 1639 aa7.77□□□□□ -1.17
ZNF540-204ENST00000586792 OCLNQ16625 522 aa7.76□□□□□ -1.17
ZNF540-204ENST00000586792 ZNF792Q3KQV3 632 aa7.76□□□□□ -1.17
ZNF540-204ENST00000586792 HGSNATQ68CP4 663 aa7.76□□□□□ -1.17
ZNF540-204ENST00000586792 XKR5Q6UX68 686 aa7.76□□□□□ -1.17
ZNF540-204ENST00000586792 ATG4DQ86TL0 474 aaPredicted RBP7.76□□□□□ -1.17
ZNF540-204ENST00000586792 GATA6Q92908 595 aa7.76□□□□□ -1.17
ZNF540-204ENST00000586792 CNTN3Q9P232 1028 aa7.76□□□□□ -1.17
ZNF540-204ENST00000586792 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.76□□□□□ -1.17
ZNF540-204ENST00000586792 ARHGEF11O15085 1522 aa7.76□□□□□ -1.17
ZNF540-204ENST00000586792 ERICH6Q7L0X2 663 aa7.75□□□□□ -1.17
ZNF540-204ENST00000586792 BCL7CQ8WUZ0 217 aaPredicted RBP7.75□□□□□ -1.17
ZNF540-204ENST00000586792 TMEM40Q8WWA1 233 aa7.75□□□□□ -1.17
ZNF540-204ENST00000586792 NUDT16Q96DE0 195 aaKnown RBP7.75□□□□□ -1.17
ZNF540-204ENST00000586792 KIF27Q86VH2 1401 aa7.75□□□□□ -1.17
ZNF540-204ENST00000586792 GRIN2AQ12879 1464 aa7.75□□□□□ -1.17
ZNF540-204ENST00000586792 CLASP1Q7Z460 1538 aa7.74□□□□□ -1.17
ZNF540-204ENST00000586792 RANGAP1P46060 587 aaPredicted RBP7.74□□□□□ -1.17
ZNF540-204ENST00000586792 NAA30Q147X3 362 aaPredicted RBP7.74□□□□□ -1.17
ZNF540-204ENST00000586792 NXPE3Q969Y0 559 aa7.74□□□□□ -1.17
ZNF540-204ENST00000586792 CLUAP1Q96AJ1 413 aa7.74□□□□□ -1.17
ZNF540-204ENST00000586792 MISP3Q96FF7 219 aa7.74□□□□□ -1.17
ZNF540-204ENST00000586792 FHAD1B1AJZ9 1412 aa7.74□□□□□ -1.17
ZNF540-204ENST00000586792 CARMIL2Q6F5E8 1435 aa7.74□□□□□ -1.17
ZNF540-204ENST00000586792 CUL7Q14999 1698 aa7.73□□□□□ -1.17
ZNF540-204ENST00000586792 ACPPP15309 386 aa7.73□□□□□ -1.17
ZNF540-204ENST00000586792 PCSK2P16519 638 aa7.73□□□□□ -1.17
ZNF540-204ENST00000586792 ZNF765Q7L2R6 523 aa7.73□□□□□ -1.17
ZNF540-204ENST00000586792 VN1R5Q7Z5H4 357 aa7.73□□□□□ -1.17
ZNF540-204ENST00000586792 C1orf127Q8N9H9 656 aa7.73□□□□□ -1.17
ZNF540-204ENST00000586792 TTC16Q8NEE8 873 aa7.73□□□□□ -1.17
ZNF540-204ENST00000586792 TIMELESSQ9UNS1 1208 aa7.73□□□□□ -1.17
ZNF540-204ENST00000586792 ZBTB39O15060 712 aa7.72□□□□□ -1.17
ZNF540-204ENST00000586792 TRPA1O75762 1119 aa7.72□□□□□ -1.17
ZNF540-204ENST00000586792 DLGAP3O95886 979 aa7.72□□□□□ -1.17
ZNF540-204ENST00000586792 HP1BP3Q5SSJ5 553 aaPredicted RBP7.72□□□□□ -1.17
ZNF540-204ENST00000586792 HOMEZQ8IX15 550 aa7.72□□□□□ -1.17
ZNF540-204ENST00000586792 FAM168AQ92567 244 aa7.72□□□□□ -1.17
ZNF540-204ENST00000586792 MKNK1Q9BUB5 465 aa7.72□□□□□ -1.17
ZNF540-204ENST00000586792 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.71□□□□□ -1.18
ZNF540-204ENST00000586792 NFICP08651 508 aa7.71□□□□□ -1.18
ZNF540-204ENST00000586792 BHLHE22Q8NFJ8 381 aaPredicted RBP7.71□□□□□ -1.18
ZNF540-204ENST00000586792 HHIPQ96QV1 700 aa7.71□□□□□ -1.18
ZNF540-204ENST00000586792 OSMRQ99650 979 aa7.71□□□□□ -1.18
ZNF540-204ENST00000586792 ZFYVE1Q9HBF4 777 aa7.71□□□□□ -1.18
ZNF540-204ENST00000586792 CXXC1Q9P0U4 656 aaPredicted RBP7.71□□□□□ -1.18
ZNF540-204ENST00000586792 ADH5P11766 374 aa7.7□□□□□ -1.18
ZNF540-204ENST00000586792 GSTM4Q03013 218 aa7.7□□□□□ -1.18
ZNF540-204ENST00000586792 TMEM132AQ24JP5 1023 aa7.7□□□□□ -1.18
ZNF540-204ENST00000586792 CFAP70Q5T0N1 1121 aa7.7□□□□□ -1.18
ZNF540-204ENST00000586792 CCER1Q8TC90 406 aaPredicted RBP7.7□□□□□ -1.18
ZNF540-204ENST00000586792 KRTAP4-5Q9BYR2 181 aa7.7□□□□□ -1.18
ZNF540-204ENST00000586792 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.7□□□□□ -1.18
ZNF540-204ENST00000586792 CEP170Q5SW79 1584 aa7.7□□□□□ -1.18
ZNF540-204ENST00000586792 ESRRAP11474 423 aaPredicted RBP7.69□□□□□ -1.18
ZNF540-204ENST00000586792 ELOAQ14241 798 aaKnown RBP7.69□□□□□ -1.18
ZNF540-204ENST00000586792 CDCA8Q53HL2 280 aa7.69□□□□□ -1.18
ZNF540-204ENST00000586792 OGFOD3Q6PK18 319 aa7.69□□□□□ -1.18
ZNF540-204ENST00000586792 ZNF574Q6ZN55 896 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms