RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 XAGE2Q96GT9 111 aa17.04■□□□□ 0.32
MBD1-212ENST00000585672 SENP3Q9H4L4 574 aaPredicted RBP17.04■□□□□ 0.32
MBD1-212ENST00000585672 SLC24A3Q9HC58 644 aa17.04■□□□□ 0.32
MBD1-212ENST00000585672 LZTFL1Q9NQ48 299 aa17.04■□□□□ 0.32
MBD1-212ENST00000585672 ZC3H4Q9UPT8 1303 aaKnown RBP17.04■□□□□ 0.32
MBD1-212ENST00000585672 CRB1P82279 1406 aa17.03■□□□□ 0.32
MBD1-212ENST00000585672 INHBEP58166 350 aa17.03■□□□□ 0.32
MBD1-212ENST00000585672 SMARCC2Q8TAQ2 1214 aa17.03■□□□□ 0.32
MBD1-212ENST00000585672 TUBB4BP68371 445 aa17.03■□□□□ 0.32
MBD1-212ENST00000585672 ATL3Q6DD88 541 aa17.03■□□□□ 0.32
MBD1-212ENST00000585672 ABCC6O95255 1503 aa17.02■□□□□ 0.32
MBD1-212ENST00000585672 A0A1W2PQ27 194 aa17.02■□□□□ 0.32
MBD1-212ENST00000585672 A0A1W2PQ64 194 aa17.02■□□□□ 0.32
MBD1-212ENST00000585672 A0A1W2PQD8 194 aa17.02■□□□□ 0.32
MBD1-212ENST00000585672 RRS1Q15050 365 aaKnown RBP17.02■□□□□ 0.32
MBD1-212ENST00000585672 PREPLQ4J6C6 727 aaPredicted RBP17.02■□□□□ 0.32
MBD1-212ENST00000585672 NOA1Q8NC60 698 aaKnown RBP17.02■□□□□ 0.32
MBD1-212ENST00000585672 HPCAL4Q9UM19 191 aa17.02■□□□□ 0.32
MBD1-212ENST00000585672 ECM2O94769 699 aaPredicted RBP17.02■□□□□ 0.31
MBD1-212ENST00000585672 GCFC2P16383 781 aaKnown RBP17.02■□□□□ 0.31
MBD1-212ENST00000585672 TTC19Q6DKK2 380 aaPredicted RBP17.02■□□□□ 0.31
MBD1-212ENST00000585672 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.02■□□□□ 0.31
MBD1-212ENST00000585672 BCAS4Q8TDM0 211 aa17.02■□□□□ 0.31
MBD1-212ENST00000585672 STK31Q9BXU1 1019 aa17.02■□□□□ 0.31
MBD1-212ENST00000585672 RBM28Q9NW13 759 aaKnown RBP17.02■□□□□ 0.31
MBD1-212ENST00000585672 ZRANB1Q9UGI0 708 aa17.02■□□□□ 0.31
MBD1-212ENST00000585672 CHUKO15111 745 aa17.01■□□□□ 0.31
MBD1-212ENST00000585672 MYL5Q02045 173 aa17.01■□□□□ 0.31
MBD1-212ENST00000585672 WDR93Q6P2C0 686 aa17.01■□□□□ 0.31
MBD1-212ENST00000585672 CDK19Q9BWU1 502 aa17.01■□□□□ 0.31
MBD1-212ENST00000585672 HSP90B1P14625 803 aaKnown RBP17.01■□□□□ 0.31
MBD1-212ENST00000585672 NF2P35240 595 aa17.01■□□□□ 0.31
MBD1-212ENST00000585672 TEX11Q8IYF3 940 aa17.01■□□□□ 0.31
MBD1-212ENST00000585672 CALRP27797 417 aaKnown RBP17■□□□□ 0.31
MBD1-212ENST00000585672 RDXP35241 583 aaKnown RBP17■□□□□ 0.31
MBD1-212ENST00000585672 KIF4BQ2VIQ3 1234 aa17■□□□□ 0.31
MBD1-212ENST00000585672 SULT6B1Q6IMI4 303 aa17■□□□□ 0.31
MBD1-212ENST00000585672 EVI5LQ96CN4 794 aa17■□□□□ 0.31
MBD1-212ENST00000585672 GNL3Q9BVP2 549 aaKnown RBP eCLIP17■□□□□ 0.31
MBD1-212ENST00000585672 ECHDC1Q9NTX5 307 aa17■□□□□ 0.31
MBD1-212ENST00000585672 TSPYL4Q9UJ04 414 aa17■□□□□ 0.31
MBD1-212ENST00000585672 SAMM50Q9Y512 469 aa17■□□□□ 0.31
MBD1-212ENST00000585672 CTAGE15A4D2H0 777 aa17■□□□□ 0.31
MBD1-212ENST00000585672 ZNF202O95125 648 aa17■□□□□ 0.31
MBD1-212ENST00000585672 TUBBP07437 444 aa17■□□□□ 0.31
MBD1-212ENST00000585672 CCDC175P0C221 793 aa17■□□□□ 0.31
MBD1-212ENST00000585672 CTAGE8P0CG41 777 aa17■□□□□ 0.31
MBD1-212ENST00000585672 GGCXP38435 758 aa17■□□□□ 0.31
MBD1-212ENST00000585672 GUCY1B3Q02153 619 aa17■□□□□ 0.31
MBD1-212ENST00000585672 CTAGE6Q86UF2 777 aa17■□□□□ 0.31
MBD1-212ENST00000585672 CTAGE4Q8IX94 777 aa17■□□□□ 0.31
MBD1-212ENST00000585672 AMOTL1Q8IY63 956 aa17■□□□□ 0.31
MBD1-212ENST00000585672 NSUN7Q8NE18 718 aaKnown RBP17■□□□□ 0.31
MBD1-212ENST00000585672 NECTIN2Q92692 538 aa17■□□□□ 0.31
MBD1-212ENST00000585672 XRN1Q8IZH2 1706 aaKnown RBP16.99■□□□□ 0.31
MBD1-212ENST00000585672 A0A0D9SFI3 127 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 ATP2B2Q01814 1243 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 ZNF569Q5MCW4 686 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 Q6ZUG5 572 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 FAM76AQ8TAV0 307 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 SEC62Q99442 399 aaKnown RBP16.99■□□□□ 0.31
MBD1-212ENST00000585672 ODF2LQ9ULJ1 636 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 GRIN2DO15399 1336 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 MYH15Q9Y2K3 1946 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 NUTM2FA1L443 756 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 H0YHG0 523 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 KIF5CO60282 957 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 PFKFB2O60825 505 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 FSBPO95073 299 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 CTDNEP1O95476 244 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 TUBB2AQ13885 445 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 NUTM2GQ5VZR2 741 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 TUBB2BQ9BVA1 445 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 SNRKQ9NRH2 765 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 RTEL1Q9NZ71 1219 aa16.99■□□□□ 0.31
MBD1-212ENST00000585672 NEXMIFQ5QGS0 1516 aa16.98■□□□□ 0.31
MBD1-212ENST00000585672 SHTN1A0MZ66 631 aa16.98■□□□□ 0.31
MBD1-212ENST00000585672 SOWAHDA6NJG2 315 aa16.98■□□□□ 0.31
MBD1-212ENST00000585672 PPFIA3O75145 1194 aa16.98■□□□□ 0.31
MBD1-212ENST00000585672 ERCC3P19447 782 aa16.98■□□□□ 0.31
MBD1-212ENST00000585672 NME9Q86XW9 330 aa16.98■□□□□ 0.31
MBD1-212ENST00000585672 AGPSO00116 658 aa16.98■□□□□ 0.31
MBD1-212ENST00000585672 EIF3HO15372 352 aaKnown RBP eCLIP16.98■□□□□ 0.315e-7■■□□□ 12.6
MBD1-212ENST00000585672 HSP90AA4PQ58FG1 418 aa16.98■□□□□ 0.31
MBD1-212ENST00000585672 WLSQ5T9L3 541 aa16.98■□□□□ 0.31
MBD1-212ENST00000585672 LINC00301Q8NCQ3 95 aa16.98■□□□□ 0.31
MBD1-212ENST00000585672 ADGRG1Q9Y653 693 aa16.98■□□□□ 0.31
MBD1-212ENST00000585672 ATP7AQ04656 1500 aa16.98■□□□□ 0.31
MBD1-212ENST00000585672 CTAGE9A4FU28 777 aa16.97■□□□□ 0.31
MBD1-212ENST00000585672 KLHL33A6NCF5 533 aa16.97■□□□□ 0.31
MBD1-212ENST00000585672 STIM1Q13586 685 aa16.97■□□□□ 0.31
MBD1-212ENST00000585672 CAPS2Q9BXY5 557 aa16.97■□□□□ 0.31
MBD1-212ENST00000585672 CLIC4Q9Y696 253 aa16.97■□□□□ 0.31
MBD1-212ENST00000585672 PTPRMP28827 1452 aa16.97■□□□□ 0.31
MBD1-212ENST00000585672 PTPDC1A2A3K4 754 aa16.97■□□□□ 0.31
MBD1-212ENST00000585672 SARNPP82979 210 aaKnown RBP16.97■□□□□ 0.31
MBD1-212ENST00000585672 PPFIA1Q13136 1202 aa16.97■□□□□ 0.31
MBD1-212ENST00000585672 SPECC1LQ69YQ0 1117 aa16.97■□□□□ 0.31
MBD1-212ENST00000585672 IQCA1Q86XH1 822 aa16.97■□□□□ 0.31
MBD1-212ENST00000585672 COG1Q8WTW3 980 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms