RNA–Protein interactions for RNA: ENST00000584601.5

ERBB2-219, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-219ENST00000584601 ZNF219Q9P2Y4 722 aaPredicted RBP13.88□□□□□ -0.19
ERBB2-219ENST00000584601 BMP15O95972 392 aa13.88□□□□□ -0.19
ERBB2-219ENST00000584601 HLA-DOAP06340 250 aa13.88□□□□□ -0.19
ERBB2-219ENST00000584601 RTCBQ9Y3I0 505 aaKnown RBP13.88□□□□□ -0.19
ERBB2-219ENST00000584601 SH3TC1Q8TE82 1336 aa13.88□□□□□ -0.19
ERBB2-219ENST00000584601 UBA7P41226 1012 aa13.88□□□□□ -0.19
ERBB2-219ENST00000584601 LRMPQ12912 555 aa13.88□□□□□ -0.19
ERBB2-219ENST00000584601 ALS2CR12Q96Q35 445 aa13.88□□□□□ -0.19
ERBB2-219ENST00000584601 SLAIN2Q9P270 581 aa13.88□□□□□ -0.19
ERBB2-219ENST00000584601 VAT1LQ9HCJ6 419 aa13.88□□□□□ -0.19
ERBB2-219ENST00000584601 VPS18Q9P253 973 aa13.88□□□□□ -0.19
ERBB2-219ENST00000584601 PUF60Q9UHX1 559 aaKnown RBP13.88□□□□□ -0.19
ERBB2-219ENST00000584601 SSH2Q76I76 1423 aa13.88□□□□□ -0.19
ERBB2-219ENST00000584601 SPHKAPQ2M3C7 1700 aa13.87□□□□□ -0.19
ERBB2-219ENST00000584601 TSPY3P0CV98 308 aa13.87□□□□□ -0.19
ERBB2-219ENST00000584601 TSPY8P0CW00 308 aa13.87□□□□□ -0.19
ERBB2-219ENST00000584601 PHKG2P15735 406 aa13.87□□□□□ -0.19
ERBB2-219ENST00000584601 IBSPP21815 317 aaPredicted RBP13.87□□□□□ -0.19
ERBB2-219ENST00000584601 MATR3P43243 847 aaKnown RBP eCLIP13.87□□□□□ -0.19
ERBB2-219ENST00000584601 CKAP4Q07065 602 aaKnown RBP13.87□□□□□ -0.19
ERBB2-219ENST00000584601 PARP10Q53GL7 1025 aa13.87□□□□□ -0.19
ERBB2-219ENST00000584601 TSG101Q99816 390 aa13.87□□□□□ -0.19
ERBB2-219ENST00000584601 PHACTR2O75167 634 aa13.87□□□□□ -0.19
ERBB2-219ENST00000584601 HLTFQ14527 1009 aaKnown RBP eCLIP13.87□□□□□ -0.19
ERBB2-219ENST00000584601 MTMR6Q9Y217 621 aa13.87□□□□□ -0.19
ERBB2-219ENST00000584601 RNF17Q9BXT8 1623 aaKnown RBP13.87□□□□□ -0.19
ERBB2-219ENST00000584601 NEURL1BA8MQ27 555 aa13.87□□□□□ -0.19
ERBB2-219ENST00000584601 TUBB4BP68371 445 aa13.87□□□□□ -0.19
ERBB2-219ENST00000584601 CDK12Q9NYV4 1490 aaPredicted RBP13.87□□□□□ -0.19
ERBB2-219ENST00000584601 CDC42BPBQ9Y5S2 1711 aa13.87□□□□□ -0.19
ERBB2-219ENST00000584601 CCDC129Q6ZRS4 1044 aa13.87□□□□□ -0.19
ERBB2-219ENST00000584601 MIGA1Q8NAN2 632 aa13.87□□□□□ -0.19
ERBB2-219ENST00000584601 CUL5Q93034 780 aa13.87□□□□□ -0.19
ERBB2-219ENST00000584601 BAG1Q99933 345 aaPredicted RBP13.87□□□□□ -0.19
ERBB2-219ENST00000584601 NAA15Q9BXJ9 866 aaKnown RBP13.87□□□□□ -0.19
ERBB2-219ENST00000584601 KDRP35968 1356 aa13.87□□□□□ -0.19
ERBB2-219ENST00000584601 ERVV-2B6SEH9 535 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 FGFR1OPO95684 399 aaKnown RBP13.86□□□□□ -0.19
ERBB2-219ENST00000584601 TRIM21P19474 475 aaKnown RBP13.86□□□□□ -0.19
ERBB2-219ENST00000584601 MNAT1P51948 309 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 ENOX2Q16206 610 aaKnown RBP13.86□□□□□ -0.19
ERBB2-219ENST00000584601 RRAGBQ5VZM2 374 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 CALML4Q96GE6 196 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 ZNF594Q96JF6 807 aaPredicted RBP13.86□□□□□ -0.19
ERBB2-219ENST00000584601 PLCD4Q9BRC7 762 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 CARD6Q9BX69 1037 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 LMTK3Q96Q04 1460 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 PDE8AO60658 829 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 GNAQP50148 359 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 TNIP1Q15025 636 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 ME3Q16798 604 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 ZNF804AQ7Z570 1209 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 C10orf67Q8IYJ2 551 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 KBTBD3Q8NAB2 608 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 ZBTB9Q96C00 473 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 LLPHQ9BRT6 129 aaKnown RBP13.86□□□□□ -0.19
ERBB2-219ENST00000584601 SEPT11Q9NVA2 429 aaKnown RBP13.86□□□□□ -0.19
ERBB2-219ENST00000584601 PPP1R12BO60237 982 aaPredicted RBP13.86□□□□□ -0.19
ERBB2-219ENST00000584601 PPP2R3AQ06190 1150 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 DNAJC10Q8IXB1 793 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 ZNF622Q969S3 477 aaKnown RBP eCLIP13.86□□□□□ -0.19
ERBB2-219ENST00000584601 XAGE2Q96GT9 111 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 TRIM47Q96LD4 638 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 CYLC1P35663 651 aaPredicted RBP13.86□□□□□ -0.19
ERBB2-219ENST00000584601 AMPD3Q01432 767 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 ZNF569Q5MCW4 686 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 IMPACTQ9P2X3 320 aa13.86□□□□□ -0.19
ERBB2-219ENST00000584601 RTL9Q8NET4 1388 aa13.85□□□□□ -0.19
ERBB2-219ENST00000584601 AKR1B10O60218 316 aa13.85□□□□□ -0.19
ERBB2-219ENST00000584601 BEND3Q5T5X7 828 aa13.85□□□□□ -0.19
ERBB2-219ENST00000584601 ANKRD2Q9GZV1 360 aa13.85□□□□□ -0.19
ERBB2-219ENST00000584601 PYCARDQ9ULZ3 195 aa13.85□□□□□ -0.19
ERBB2-219ENST00000584601 RGS12O14924 1447 aa13.85□□□□□ -0.19
ERBB2-219ENST00000584601 TUBBP07437 444 aa13.85□□□□□ -0.19
ERBB2-219ENST00000584601 RHOXF2BP0C7M4 288 aa13.85□□□□□ -0.19
ERBB2-219ENST00000584601 ZNF853P0CG23 659 aa13.85□□□□□ -0.19
ERBB2-219ENST00000584601 CALM1P0DP23 149 aa13.85□□□□□ -0.19
ERBB2-219ENST00000584601 CALM2P0DP24 149 aa13.85□□□□□ -0.19
ERBB2-219ENST00000584601 CALM3P0DP25 149 aa13.85□□□□□ -0.19
ERBB2-219ENST00000584601 PUM3Q15397 648 aaKnown RBP13.85□□□□□ -0.19
ERBB2-219ENST00000584601 GPATCH11Q8N954 259 aa13.85□□□□□ -0.19
ERBB2-219ENST00000584601 RHOXF2Q9BQY4 288 aa13.85□□□□□ -0.19
ERBB2-219ENST00000584601 JAK2O60674 1132 aa13.85□□□□□ -0.19
ERBB2-219ENST00000584601 FANCCQ00597 558 aa13.85□□□□□ -0.19
ERBB2-219ENST00000584601 NEFHP12036 1026 aa13.84□□□□□ -0.19
ERBB2-219ENST00000584601 GTF2A1P52655 376 aaPredicted RBP13.84□□□□□ -0.19
ERBB2-219ENST00000584601 STX17P56962 302 aa13.84□□□□□ -0.19
ERBB2-219ENST00000584601 IFFO1Q0D2I5 559 aa13.84□□□□□ -0.19
ERBB2-219ENST00000584601 CUL4AQ13619 759 aa13.84□□□□□ -0.19
ERBB2-219ENST00000584601 TTC6Q86TZ1 520 aa13.84□□□□□ -0.19
ERBB2-219ENST00000584601 APPBP2Q92624 585 aa13.84□□□□□ -0.19
ERBB2-219ENST00000584601 ELP1O95163 1332 aa13.84□□□□□ -0.19
ERBB2-219ENST00000584601 MBD4O95243 580 aa13.84□□□□□ -0.19
ERBB2-219ENST00000584601 IPO4Q8TEX9 1081 aaKnown RBP13.84□□□□□ -0.19
ERBB2-219ENST00000584601 DHX58Q96C10 678 aa13.84□□□□□ -0.19
ERBB2-219ENST00000584601 BCCIPQ9P287 314 aaKnown RBP eCLIP13.84□□□□□ -0.19
ERBB2-219ENST00000584601 ZNF215Q9UL58 517 aaPredicted RBP13.84□□□□□ -0.19
ERBB2-219ENST00000584601 SPECC1Q5M775 1068 aa13.84□□□□□ -0.19
ERBB2-219ENST00000584601 RASSF4Q9H2L5 321 aa13.84□□□□□ -0.19
ERBB2-219ENST00000584601 NCOA5Q9HCD5 579 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms