RNA–Protein interactions for RNA: ENST00000584328.1

NF1-223, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-223ENST00000584328 TCF12Q99081 682 aa8.41□□□□□ -1.06
NF1-223ENST00000584328 EHD4Q9H223 541 aa8.41□□□□□ -1.06
NF1-223ENST00000584328 A0A096LPE4 126 aa8.4□□□□□ -1.06
NF1-223ENST00000584328 A0A1W2PPZ6 126 aa8.4□□□□□ -1.06
NF1-223ENST00000584328 PATL2C9JE40 543 aaKnown RBP8.4□□□□□ -1.06
NF1-223ENST00000584328 GLB1P16278 677 aa8.4□□□□□ -1.06
NF1-223ENST00000584328 GRIA4P48058 902 aa8.4□□□□□ -1.06
NF1-223ENST00000584328 SPRED3Q2MJR0 410 aa8.4□□□□□ -1.06
NF1-223ENST00000584328 DZIP1LQ8IYY4 767 aaKnown RBP8.4□□□□□ -1.06
NF1-223ENST00000584328 UBASH3BQ8TF42 649 aa8.4□□□□□ -1.06
NF1-223ENST00000584328 CARMIL1Q5VZK9 1371 aa8.39□□□□□ -1.07
NF1-223ENST00000584328 H2AFB1P0C5Y9 115 aa8.39□□□□□ -1.07
NF1-223ENST00000584328 H2AFB2P0C5Z0 115 aa8.39□□□□□ -1.07
NF1-223ENST00000584328 ESRRAP11474 423 aaPredicted RBP8.39□□□□□ -1.07
NF1-223ENST00000584328 Q6ZS46 218 aa8.39□□□□□ -1.07
NF1-223ENST00000584328 KIAA1211Q6ZU35 1233 aa8.39□□□□□ -1.07
NF1-223ENST00000584328 CHD1O14646 1710 aa8.39□□□□□ -1.07
NF1-223ENST00000584328 GADD45BO75293 160 aaPredicted RBP8.38□□□□□ -1.07
NF1-223ENST00000584328 PDIA4P13667 645 aaKnown RBP8.38□□□□□ -1.07
NF1-223ENST00000584328 ITGB7P26010 798 aa8.38□□□□□ -1.07
NF1-223ENST00000584328 CEP170Q5SW79 1584 aa8.38□□□□□ -1.07
NF1-223ENST00000584328 TREHO43280 583 aa8.37□□□□□ -1.07
NF1-223ENST00000584328 PLCB3Q01970 1234 aa8.37□□□□□ -1.07
NF1-223ENST00000584328 PCDH1Q08174 1060 aa8.37□□□□□ -1.07
NF1-223ENST00000584328 DSC3Q14574 896 aa8.37□□□□□ -1.07
NF1-223ENST00000584328 AEBP1Q8IUX7 1158 aa8.37□□□□□ -1.07
NF1-223ENST00000584328 EPS8L3Q8TE67 593 aaKnown RBP8.37□□□□□ -1.07
NF1-223ENST00000584328 CLEC4MQ9H2X3 399 aaPredicted RBP8.37□□□□□ -1.07
NF1-223ENST00000584328 SOX17Q9H6I2 414 aaPredicted RBP8.37□□□□□ -1.07
NF1-223ENST00000584328 RAPGEF2Q9Y4G8 1499 aa8.37□□□□□ -1.07
NF1-223ENST00000584328 ZSCAN29Q8IWY8 852 aaPredicted RBP8.36□□□□□ -1.07
NF1-223ENST00000584328 UBL7Q96S82 380 aaPredicted RBP8.36□□□□□ -1.07
NF1-223ENST00000584328 CEP41Q9BYV8 373 aa8.36□□□□□ -1.07
NF1-223ENST00000584328 GSTM4Q03013 218 aa8.35□□□□□ -1.07
NF1-223ENST00000584328 ZNF423Q2M1K9 1284 aa8.35□□□□□ -1.07
NF1-223ENST00000584328 PRSS36Q5K4E3 855 aa8.35□□□□□ -1.07
NF1-223ENST00000584328 RUSC1Q9BVN2 902 aa8.35□□□□□ -1.07
NF1-223ENST00000584328 USP26Q9BXU7 913 aa8.35□□□□□ -1.07
NF1-223ENST00000584328 PNMA6FA0A0J9YX94 578 aa8.34□□□□□ -1.07
NF1-223ENST00000584328 ITPKAP23677 461 aa8.34□□□□□ -1.07
NF1-223ENST00000584328 GRM2Q14416 872 aa8.34□□□□□ -1.07
NF1-223ENST00000584328 PRPF40BQ6NWY9 871 aaKnown RBP8.34□□□□□ -1.07
NF1-223ENST00000584328 PI16Q6UXB8 463 aa8.34□□□□□ -1.07
NF1-223ENST00000584328 PRR23CQ6ZRP0 262 aa8.34□□□□□ -1.07
NF1-223ENST00000584328 RNF208Q9H0X6 261 aa8.34□□□□□ -1.07
NF1-223ENST00000584328 ZNF576Q9H609 170 aa8.34□□□□□ -1.07
NF1-223ENST00000584328 ABCB6Q9NP58 842 aa8.34□□□□□ -1.07
NF1-223ENST00000584328 NLRP2Q9NX02 1062 aa8.34□□□□□ -1.07
NF1-223ENST00000584328 TRAK1Q9UPV9 953 aa8.34□□□□□ -1.07
NF1-223ENST00000584328 KIAA0586Q9BVV6 1533 aa8.34□□□□□ -1.08
NF1-223ENST00000584328 SHROOM2Q13796 1616 aa8.33□□□□□ -1.08
NF1-223ENST00000584328 ENOX2Q16206 610 aaKnown RBP8.33□□□□□ -1.08
NF1-223ENST00000584328 ASB16Q96NS5 453 aa8.33□□□□□ -1.08
NF1-223ENST00000584328 KIF21BO75037 1637 aa8.32□□□□□ -1.08
NF1-223ENST00000584328 LOC100289279A0A1B0GTE1 492 aa8.32□□□□□ -1.08
NF1-223ENST00000584328 TMEM238LA0A1B0GVL6 79 aa8.32□□□□□ -1.08
NF1-223ENST00000584328 EIF4EBP3O60516 100 aaPredicted RBP8.32□□□□□ -1.08
NF1-223ENST00000584328 MAPK8P45983 427 aa8.32□□□□□ -1.08
NF1-223ENST00000584328 ANKRD34AQ69YU3 496 aa8.32□□□□□ -1.08
NF1-223ENST00000584328 GLIS3Q8NEA6 775 aa8.32□□□□□ -1.08
NF1-223ENST00000584328 MEGF11A6BM72 1044 aa8.31□□□□□ -1.08
NF1-223ENST00000584328 SART1O43290 800 aaKnown RBP8.31□□□□□ -1.08
NF1-223ENST00000584328 B3GALT4O96024 378 aa8.31□□□□□ -1.08
NF1-223ENST00000584328 PTPN12Q05209 780 aaKnown RBP8.31□□□□□ -1.08
NF1-223ENST00000584328 UVSSAQ2YD98 709 aa8.31□□□□□ -1.08
NF1-223ENST00000584328 FDX2Q6P4F2 183 aa8.31□□□□□ -1.08
NF1-223ENST00000584328 ARMC10Q8N2F6 343 aa8.31□□□□□ -1.08
NF1-223ENST00000584328 UTP4Q969X6 686 aaKnown RBP8.31□□□□□ -1.08
NF1-223ENST00000584328 FAM46AQ96IP4 442 aaKnown RBP8.31□□□□□ -1.08
NF1-223ENST00000584328 DHX15O43143 795 aaKnown RBP8.3□□□□□ -1.08
NF1-223ENST00000584328 DLGAP3O95886 979 aa8.3□□□□□ -1.08
NF1-223ENST00000584328 FMR1Q06787 632 aaKnown RBP eCLIP8.3□□□□□ -1.08
NF1-223ENST00000584328 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.3□□□□□ -1.08
NF1-223ENST00000584328 NUTM2GQ5VZR2 741 aa8.3□□□□□ -1.08
NF1-223ENST00000584328 DDX54Q8TDD1 881 aaKnown RBP8.3□□□□□ -1.08
NF1-223ENST00000584328 BCO2Q9BYV7 579 aa8.3□□□□□ -1.08
NF1-223ENST00000584328 NRSN2Q9GZP1 204 aa8.3□□□□□ -1.08
NF1-223ENST00000584328 PPP4R2Q9NY27 417 aa8.3□□□□□ -1.08
NF1-223ENST00000584328 ARHGEF11O15085 1522 aa8.29□□□□□ -1.08
NF1-223ENST00000584328 CYP11A1P05108 521 aa8.29□□□□□ -1.08
NF1-223ENST00000584328 PREPP48147 710 aa8.29□□□□□ -1.08
NF1-223ENST00000584328 FCGRTP55899 365 aa8.29□□□□□ -1.08
NF1-223ENST00000584328 DTHD1Q6ZMT9 781 aa8.29□□□□□ -1.08
NF1-223ENST00000584328 TMPRSS13Q9BYE2 586 aa8.29□□□□□ -1.08
NF1-223ENST00000584328 RAXQ9Y2V3 346 aa8.29□□□□□ -1.08
NF1-223ENST00000584328 MAOBP27338 520 aa8.28□□□□□ -1.08
NF1-223ENST00000584328 POU4F3Q15319 338 aa8.28□□□□□ -1.08
NF1-223ENST00000584328 RPS26P11Q5JNZ5 115 aaPredicted RBP8.28□□□□□ -1.08
NF1-223ENST00000584328 EXOSC6Q5RKV6 272 aaKnown RBP8.28□□□□□ -1.08
NF1-223ENST00000584328 ZMYM1Q5SVZ6 1142 aa8.28□□□□□ -1.08
NF1-223ENST00000584328 SND1Q7KZF4 910 aaKnown RBP eCLIP8.28□□□□□ -1.08
NF1-223ENST00000584328 C12orf50Q8NA57 414 aaPredicted RBP8.28□□□□□ -1.08
NF1-223ENST00000584328 MYRFLQ96LU7 910 aa8.28□□□□□ -1.08
NF1-223ENST00000584328 TRIM56Q9BRZ2 755 aaKnown RBP8.28□□□□□ -1.08
NF1-223ENST00000584328 CYP4F12Q9HCS2 524 aa8.28□□□□□ -1.08
NF1-223ENST00000584328 UGGT2Q9NYU1 1516 aa8.28□□□□□ -1.08
NF1-223ENST00000584328 IQGAP2Q13576 1575 aa8.27□□□□□ -1.09
NF1-223ENST00000584328 ZNF157P51786 506 aaPredicted RBP8.27□□□□□ -1.09
NF1-223ENST00000584328 NXPE4Q6UWF7 544 aa8.27□□□□□ -1.09
NF1-223ENST00000584328 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms