RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 ANO1Q5XXA6 986 aa11.05□□□□□ -0.64
PPP4R1-222ENST00000582594 WDR24Q96S15 920 aa11.05□□□□□ -0.64
PPP4R1-222ENST00000582594 ZSWIM4Q9H7M6 989 aa11.05□□□□□ -0.64
PPP4R1-222ENST00000582594 HELLSQ9NRZ9 838 aa11.05□□□□□ -0.64
PPP4R1-222ENST00000582594 CPLX1O14810 134 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 YEATS4O95619 227 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 ZMYM1Q5SVZ6 1142 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 AXDND1Q5T1B0 1012 aaPredicted RBP11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 KRBA2Q6ZNG9 492 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 ANKRD24Q8TF21 1146 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 ZFP91Q96JP5 570 aaPredicted RBP11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 POLR3EQ9NVU0 708 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 FANCLQ9NW38 375 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 TBC1D8O95759 1140 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 CASQ1P31415 396 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 SYKP43405 635 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 KCNJ6P48051 423 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 RAD51AP2Q09MP3 1159 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 LRRFIP1Q32MZ4 808 aaKnown RBP11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 ZNF790Q6PG37 636 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 FBXO18Q8NFZ0 1043 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 ZNF594Q96JF6 807 aaPredicted RBP11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 CLIC6Q96NY7 704 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 TRIM34Q9BYJ4 488 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 PPP2R2CQ9Y2T4 447 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 EFCAB8A8MWE9 144 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 TULP2O00295 520 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 CCP110O43303 1012 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 PRC1O43663 620 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 RXRAP19793 462 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 FKBP4Q02790 459 aaKnown RBP eCLIP11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 KARSQ15046 597 aaKnown RBP11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 CC2D1AQ6P1N0 951 aaPredicted RBP11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 STK11IPQ8N1F8 1099 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 NFATC2IPQ8NCF5 419 aa11.04□□□□□ -0.64
PPP4R1-222ENST00000582594 IFIT1P09914 478 aaKnown RBP11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 ADKP55263 362 aaKnown RBP11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 MYL5Q02045 173 aa11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 SMC1AQ14683 1233 aaKnown RBP11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 WASHC4Q2M389 1173 aa11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 ESCO1Q5FWF5 840 aa11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 CCDC158Q5M9N0 1113 aa11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 VSTM4Q8IW00 320 aa11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 DESI2Q9BSY9 194 aa11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 RFX7Q2KHR2 1363 aa11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 PALLDQ8WX93 1383 aa11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 IKBKBO14920 756 aa11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 RNF113AO15541 343 aaKnown RBP11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 CMA1P23946 247 aa11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 KIF23Q02241 960 aaPredicted RBP11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 PPP2R3AQ06190 1150 aa11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 SPECC1Q5M775 1068 aa11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 TOGARAM2Q6ZUX3 1019 aa11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 PLCD3Q8N3E9 789 aa11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 OSBP2Q969R2 916 aa11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 ZNF496Q96IT1 587 aaPredicted RBP11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 HPS5Q9UPZ3 1129 aa11.03□□□□□ -0.64
PPP4R1-222ENST00000582594 FOXN1O15353 648 aa11.02□□□□□ -0.64
PPP4R1-222ENST00000582594 ZSCAN12O43309 604 aa11.02□□□□□ -0.64
PPP4R1-222ENST00000582594 CBFA2T2O43439 604 aa11.02□□□□□ -0.64
PPP4R1-222ENST00000582594 FAM193AP78312 1265 aa11.02□□□□□ -0.64
PPP4R1-222ENST00000582594 PDE4BQ07343 736 aa11.02□□□□□ -0.64
PPP4R1-222ENST00000582594 LRRC24Q50LG9 513 aa11.02□□□□□ -0.64
PPP4R1-222ENST00000582594 CREBRFQ8IUR6 639 aa11.02□□□□□ -0.64
PPP4R1-222ENST00000582594 ARHGAP23Q9P227 1491 aa11.02□□□□□ -0.65
PPP4R1-222ENST00000582594 TUBB4AP04350 444 aa11.02□□□□□ -0.65
PPP4R1-222ENST00000582594 CDC27P30260 824 aa11.02□□□□□ -0.65
PPP4R1-222ENST00000582594 SHC4Q6S5L8 630 aa11.02□□□□□ -0.65
PPP4R1-222ENST00000582594 OLFM4Q6UX06 510 aa11.02□□□□□ -0.65
PPP4R1-222ENST00000582594 TMEM139Q8IV31 216 aa11.02□□□□□ -0.65
PPP4R1-222ENST00000582594 SRRTQ9BXP5 876 aaKnown RBP11.02□□□□□ -0.65
PPP4R1-222ENST00000582594 PARD6BQ9BYG5 372 aa11.02□□□□□ -0.65
PPP4R1-222ENST00000582594 INTS13Q9NVM9 706 aa11.02□□□□□ -0.65
PPP4R1-222ENST00000582594 DENND2AQ9ULE3 1009 aa11.02□□□□□ -0.65
PPP4R1-222ENST00000582594 AXIN2Q9Y2T1 843 aa11.02□□□□□ -0.65
PPP4R1-222ENST00000582594 NFAT5O94916 1531 aa11.01□□□□□ -0.65
PPP4R1-222ENST00000582594 RABL6Q3YEC7 729 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-222ENST00000582594 BRAPQ7Z569 592 aa11.01□□□□□ -0.65
PPP4R1-222ENST00000582594 BAG1Q99933 345 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-222ENST00000582594 IRX2Q9BZI1 471 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-222ENST00000582594 FEZ2Q9UHY8 353 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-222ENST00000582594 C5P01031 1676 aa11.01□□□□□ -0.65
PPP4R1-222ENST00000582594 ATG9AQ7Z3C6 839 aa11.01□□□□□ -0.65
PPP4R1-222ENST00000582594 TXLNBQ8N3L3 684 aa11.01□□□□□ -0.65
PPP4R1-222ENST00000582594 DHX58Q96C10 678 aa11.01□□□□□ -0.65
PPP4R1-222ENST00000582594 AFDNP55196 1824 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-222ENST00000582594 ANTXR2P58335 489 aa11.01□□□□□ -0.65
PPP4R1-222ENST00000582594 SLC39A14Q15043 492 aa11.01□□□□□ -0.65
PPP4R1-222ENST00000582594 LONRF3Q496Y0 759 aa11.01□□□□□ -0.65
PPP4R1-222ENST00000582594 METTL16Q86W50 562 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-222ENST00000582594 TRMT44Q8IYL2 757 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-222ENST00000582594 KCNH5Q8NCM2 988 aa11.01□□□□□ -0.65
PPP4R1-222ENST00000582594 TUBE1Q9UJT0 475 aa11.01□□□□□ -0.65
PPP4R1-222ENST00000582594 ARHGAP6O43182 974 aa11□□□□□ -0.65
PPP4R1-222ENST00000582594 GCP02774 474 aa11□□□□□ -0.65
PPP4R1-222ENST00000582594 TPM1P09493 284 aa11□□□□□ -0.65
PPP4R1-222ENST00000582594 LMAN1P49257 510 aa11□□□□□ -0.65
PPP4R1-222ENST00000582594 MAP3K9P80192 1104 aa11□□□□□ -0.65
PPP4R1-222ENST00000582594 DHX8Q14562 1220 aaKnown RBP11□□□□□ -0.65
PPP4R1-222ENST00000582594 MTF1Q14872 753 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms