RNA–Protein interactions for RNA: ENST00000582565.1

NCOR1-222, Transcript of nuclear receptor corepressor 1, human

TSL 4

Gene NCOR1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-222	ENST00000582565	PHTF2	Q8N3S3	785 aa		13.88	□□□□□ -0.19
NCOR1-222	ENST00000582565	NBPF15	Q8N660	670 aa		13.88	□□□□□ -0.19
NCOR1-222	ENST00000582565	CNBD1	Q8NA66	436 aa		13.88	□□□□□ -0.19
NCOR1-222	ENST00000582565	C7orf43	Q8WVR3	580 aa		13.88	□□□□□ -0.19
NCOR1-222	ENST00000582565	LTBP3	Q9NS15	1303 aa		13.88	□□□□□ -0.19
NCOR1-222	ENST00000582565	DCTN1	Q14203	1278 aa		13.87	□□□□□ -0.19
NCOR1-222	ENST00000582565	PRPF40B	Q6NWY9	871 aa	Known RBP	13.87	□□□□□ -0.19
NCOR1-222	ENST00000582565	DOLK	Q9UPQ8	538 aa		13.87	□□□□□ -0.19
NCOR1-222	ENST00000582565	PCDHB11	Q9Y5F2	797 aa		13.87	□□□□□ -0.19
NCOR1-222	ENST00000582565	GFRA3	O60609	400 aa		13.86	□□□□□ -0.19
NCOR1-222	ENST00000582565	DDN	O94850	711 aa	Predicted RBP	13.86	□□□□□ -0.19
NCOR1-222	ENST00000582565	PPP2R1A	P30153	589 aa		13.86	□□□□□ -0.19
NCOR1-222	ENST00000582565	TBC1D9	Q6ZT07	1266 aa		13.86	□□□□□ -0.19
NCOR1-222	ENST00000582565	PLPP7	Q8NBV4	271 aa		13.86	□□□□□ -0.19
NCOR1-222	ENST00000582565	CNKSR1	Q969H4	720 aa		13.86	□□□□□ -0.19
NCOR1-222	ENST00000582565	MASTL	Q96GX5	879 aa		13.86	□□□□□ -0.19
NCOR1-222	ENST00000582565	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.86	□□□□□ -0.19
NCOR1-222	ENST00000582565	PPP1R12C	Q9BZL4	782 aa		13.86	□□□□□ -0.19
NCOR1-222	ENST00000582565	TAOK3	Q9H2K8	898 aa		13.86	□□□□□ -0.19
NCOR1-222	ENST00000582565	ERVH48-1	M5A8F1	160 aa		13.85	□□□□□ -0.19
NCOR1-222	ENST00000582565	ATP9B	O43861	1147 aa		13.85	□□□□□ -0.19
NCOR1-222	ENST00000582565	SNRPA1	P09661	255 aa	Known RBP	13.85	□□□□□ -0.19
NCOR1-222	ENST00000582565	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.85	□□□□□ -0.19
NCOR1-222	ENST00000582565	ST5	P78524	1137 aa		13.85	□□□□□ -0.19
NCOR1-222	ENST00000582565	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
NCOR1-222	ENST00000582565	CLEC4G	Q6UXB4	293 aa		13.85	□□□□□ -0.19
NCOR1-222	ENST00000582565	KLRG2	A4D1S0	409 aa	Predicted RBP	13.84	□□□□□ -0.19
NCOR1-222	ENST00000582565	PALM3	A6NDB9	673 aa	Predicted RBP	13.84	□□□□□ -0.19
NCOR1-222	ENST00000582565	FAM187A	A6NFU0	413 aa		13.84	□□□□□ -0.19
NCOR1-222	ENST00000582565	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.84	□□□□□ -0.19
NCOR1-222	ENST00000582565	OLFM4	Q6UX06	510 aa		13.84	□□□□□ -0.19
NCOR1-222	ENST00000582565	CFAP53	Q96M91	514 aa		13.84	□□□□□ -0.19
NCOR1-222	ENST00000582565	ARID3A	Q99856	593 aa		13.84	□□□□□ -0.19
NCOR1-222	ENST00000582565	TFIP11	Q9UBB9	837 aa	Known RBP	13.84	□□□□□ -0.19
NCOR1-222	ENST00000582565	NRG2	O14511	850 aa	Predicted RBP	13.83	□□□□□ -0.2
NCOR1-222	ENST00000582565	HLF	Q16534	295 aa		13.83	□□□□□ -0.2
NCOR1-222	ENST00000582565	MAP7D1	Q3KQU3	841 aa		13.83	□□□□□ -0.2
NCOR1-222	ENST00000582565	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.83	□□□□□ -0.2
NCOR1-222	ENST00000582565	MIS18A	Q9NYP9	233 aa		13.83	□□□□□ -0.2
NCOR1-222	ENST00000582565	NUDC	Q9Y266	331 aa		13.83	□□□□□ -0.2
NCOR1-222	ENST00000582565	USP17L5	A8MUK1	530 aa		13.82	□□□□□ -0.2
NCOR1-222	ENST00000582565	HSPA1A	P0DMV8	641 aa	Known RBP	13.82	□□□□□ -0.2
NCOR1-222	ENST00000582565	HSPA1B	P0DMV9	641 aa	Known RBP	13.82	□□□□□ -0.2
NCOR1-222	ENST00000582565	NPM2	Q86SE8	214 aa	Known RBP	13.82	□□□□□ -0.2
NCOR1-222	ENST00000582565	RTF1	Q92541	710 aa	Known RBP	13.82	□□□□□ -0.2
NCOR1-222	ENST00000582565	PGPEP1	Q9NXJ5	209 aa		13.82	□□□□□ -0.2
NCOR1-222	ENST00000582565	DLG5	Q8TDM6	1919 aa		13.82	□□□□□ -0.2
NCOR1-222	ENST00000582565	NPHP1	O15259	732 aa		13.81	□□□□□ -0.2
NCOR1-222	ENST00000582565	HTATSF1	O43719	755 aa	Known RBP	13.81	□□□□□ -0.2
NCOR1-222	ENST00000582565	NPR1	P16066	1061 aa		13.81	□□□□□ -0.2
NCOR1-222	ENST00000582565	TSGA10IP	Q3SY00	556 aa		13.81	□□□□□ -0.2
NCOR1-222	ENST00000582565	OXLD1	Q5BKU9	147 aa		13.81	□□□□□ -0.2
NCOR1-222	ENST00000582565	HPS1	Q92902	700 aa		13.81	□□□□□ -0.2
NCOR1-222	ENST00000582565	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.81	□□□□□ -0.2
NCOR1-222	ENST00000582565	TMPRSS4	Q9NRS4	437 aa		13.81	□□□□□ -0.2
NCOR1-222	ENST00000582565	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
NCOR1-222	ENST00000582565	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.81	□□□□□ -0.2
NCOR1-222	ENST00000582565	FAM177B	A6PVY3	158 aa		13.8	□□□□□ -0.2
NCOR1-222	ENST00000582565	TAF7	Q15545	349 aa	Predicted RBP	13.8	□□□□□ -0.2
NCOR1-222	ENST00000582565	CCDC93	Q567U6	631 aa		13.8	□□□□□ -0.2
NCOR1-222	ENST00000582565	SOGA3	Q5TF21	947 aa		13.8	□□□□□ -0.2
NCOR1-222	ENST00000582565	ZNF652	Q9Y2D9	606 aa		13.8	□□□□□ -0.2
NCOR1-222	ENST00000582565	ZNF541	Q9H0D2	1346 aa		13.8	□□□□□ -0.2
NCOR1-222	ENST00000582565	LAMB4	A4D0S4	1761 aa		13.8	□□□□□ -0.2
NCOR1-222	ENST00000582565	SCN4A	P35499	1836 aa		13.8	□□□□□ -0.2
NCOR1-222	ENST00000582565	SNED1	Q8TER0	1413 aa		13.8	□□□□□ -0.2
NCOR1-222	ENST00000582565	KDM3B	Q7LBC6	1761 aa		13.79	□□□□□ -0.2
NCOR1-222	ENST00000582565	NUP98	P52948	1817 aa		13.79	□□□□□ -0.2
NCOR1-222	ENST00000582565	USP17L3	A6NCW0	530 aa		13.79	□□□□□ -0.2
NCOR1-222	ENST00000582565	USP17L4	A6NCW7	530 aa		13.79	□□□□□ -0.2
NCOR1-222	ENST00000582565	WDR4	P57081	412 aa	Known RBP	13.79	□□□□□ -0.2
NCOR1-222	ENST00000582565	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
NCOR1-222	ENST00000582565	LAPTM4A	Q15012	233 aa		13.79	□□□□□ -0.2
NCOR1-222	ENST00000582565	TRAF7	Q6Q0C0	670 aa		13.79	□□□□□ -0.2
NCOR1-222	ENST00000582565	USP17L2	Q6R6M4	530 aa		13.79	□□□□□ -0.2
NCOR1-222	ENST00000582565	TPTE2	Q6XPS3	522 aa		13.79	□□□□□ -0.2
NCOR1-222	ENST00000582565	USP17L1	Q7RTZ2	530 aa		13.79	□□□□□ -0.2
NCOR1-222	ENST00000582565	DEPDC4	Q8N2C3	294 aa		13.79	□□□□□ -0.2
NCOR1-222	ENST00000582565	IRX2	Q9BZI1	471 aa	Predicted RBP	13.79	□□□□□ -0.2
NCOR1-222	ENST00000582565	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.79	□□□□□ -0.2
NCOR1-222	ENST00000582565	PASK	Q96RG2	1323 aa		13.79	□□□□□ -0.2
NCOR1-222	ENST00000582565	ABCC12	Q96J65	1359 aa		13.79	□□□□□ -0.2
NCOR1-222	ENST00000582565	LMOD1	P29536	600 aa	Predicted RBP	13.78	□□□□□ -0.2
NCOR1-222	ENST00000582565	PKDCC	Q504Y2	493 aa		13.78	□□□□□ -0.2
NCOR1-222	ENST00000582565	SLC51A	Q86UW1	340 aa		13.78	□□□□□ -0.2
NCOR1-222	ENST00000582565	TNS4	Q8IZW8	715 aa		13.78	□□□□□ -0.2
NCOR1-222	ENST00000582565	CYLD	Q9NQC7	956 aa		13.78	□□□□□ -0.2
NCOR1-222	ENST00000582565	MKRN1	Q9UHC7	482 aa	Known RBP	13.78	□□□□□ -0.2
NCOR1-222	ENST00000582565	ADAMTSL1	Q8N6G6	1762 aa		13.78	□□□□□ -0.2
NCOR1-222	ENST00000582565	ZIC2	O95409	532 aa	Predicted RBP	13.77	□□□□□ -0.21
NCOR1-222	ENST00000582565	COL4A5	P29400	1685 aa		13.77	□□□□□ -0.21
NCOR1-222	ENST00000582565	NCOA4	Q13772	614 aa		13.77	□□□□□ -0.21
NCOR1-222	ENST00000582565	EML3	Q32P44	896 aa		13.77	□□□□□ -0.21
NCOR1-222	ENST00000582565	PLEKHM2	Q8IWE5	1019 aa		13.77	□□□□□ -0.21
NCOR1-222	ENST00000582565	PLEKHF1	Q96S99	279 aa		13.77	□□□□□ -0.21
NCOR1-222	ENST00000582565	THUMPD2	Q9BTF0	503 aa	Known RBP	13.77	□□□□□ -0.21
NCOR1-222	ENST00000582565	MYC	P01106	439 aa	Predicted RBP	13.76	□□□□□ -0.21
NCOR1-222	ENST00000582565	EIF4A1	P60842	406 aa	Known RBP	13.76	□□□□□ -0.21
NCOR1-222	ENST00000582565	CRY2	Q49AN0	593 aa		13.76	□□□□□ -0.21
NCOR1-222	ENST00000582565	TTLL7	Q6ZT98	887 aa		13.76	□□□□□ -0.21

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