RNA–Protein interactions for RNA: ENST00000581733.1

TVP23B-209, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5 BASIC

Gene TVP23B, Length 1,258 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-209ENST00000581733 PNISRQ8TF01 805 aaKnown RBP8.61□□□□□ -1.03
TVP23B-209ENST00000581733 NUDT8Q8WV74 236 aa8.61□□□□□ -1.03
TVP23B-209ENST00000581733 SLC26A8Q96RN1 970 aa8.61□□□□□ -1.03
TVP23B-209ENST00000581733 SSBP4Q9BWG4 385 aaPredicted RBP8.61□□□□□ -1.03
TVP23B-209ENST00000581733 IGFLR1Q9H665 355 aa8.61□□□□□ -1.03
TVP23B-209ENST00000581733 JPH1Q9HDC5 661 aaPredicted RBP8.61□□□□□ -1.03
TVP23B-209ENST00000581733 RNF112Q9ULX5 631 aa8.61□□□□□ -1.03
TVP23B-209ENST00000581733 USP54Q70EL1 1684 aa8.61□□□□□ -1.03
TVP23B-209ENST00000581733 BLMP54132 1417 aaPredicted RBP8.61□□□□□ -1.03
TVP23B-209ENST00000581733 EDC4Q6P2E9 1401 aaKnown RBP8.61□□□□□ -1.03
TVP23B-209ENST00000581733 KIF1AQ12756 1690 aa8.6□□□□□ -1.03
TVP23B-209ENST00000581733 NKTRP30414 1462 aaKnown RBP8.6□□□□□ -1.03
TVP23B-209ENST00000581733 EML1O00423 815 aa8.6□□□□□ -1.03
TVP23B-209ENST00000581733 SKIP12755 728 aa8.6□□□□□ -1.03
TVP23B-209ENST00000581733 RFX1P22670 979 aa8.6□□□□□ -1.03
TVP23B-209ENST00000581733 WDR43Q15061 677 aaKnown RBP eCLIP8.6□□□□□ -1.03
TVP23B-209ENST00000581733 TBCELQ5QJ74 424 aa8.6□□□□□ -1.03
TVP23B-209ENST00000581733 MORC1Q86VD1 984 aa8.6□□□□□ -1.03
TVP23B-209ENST00000581733 PCMTD2Q9NV79 361 aa8.6□□□□□ -1.03
TVP23B-209ENST00000581733 SCHIP1Q9P0W5 487 aaPredicted RBP8.6□□□□□ -1.03
TVP23B-209ENST00000581733 AMOTL2Q9Y2J4 779 aa8.6□□□□□ -1.03
TVP23B-209ENST00000581733 ANKARQ7Z5J8 1434 aa8.6□□□□□ -1.03
TVP23B-209ENST00000581733 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.59□□□□□ -1.03
TVP23B-209ENST00000581733 USP17L3A6NCW0 530 aa8.59□□□□□ -1.03
TVP23B-209ENST00000581733 USP17L4A6NCW7 530 aa8.59□□□□□ -1.03
TVP23B-209ENST00000581733 USP17L5A8MUK1 530 aa8.59□□□□□ -1.03
TVP23B-209ENST00000581733 NOS2P35228 1153 aa8.59□□□□□ -1.03
TVP23B-209ENST00000581733 USP17L2Q6R6M4 530 aa8.59□□□□□ -1.03
TVP23B-209ENST00000581733 USP17L1Q7RTZ2 530 aa8.59□□□□□ -1.03
TVP23B-209ENST00000581733 BHMTQ93088 406 aa8.59□□□□□ -1.03
TVP23B-209ENST00000581733 CEP63Q96MT8 703 aa8.59□□□□□ -1.03
TVP23B-209ENST00000581733 BRD7Q9NPI1 651 aa8.59□□□□□ -1.03
TVP23B-209ENST00000581733 POLR3AO14802 1390 aaPredicted RBP8.59□□□□□ -1.03
TVP23B-209ENST00000581733 CPSF1Q10570 1443 aaKnown RBP8.58□□□□□ -1.04
TVP23B-209ENST00000581733 BACH1O14867 736 aa8.58□□□□□ -1.04
TVP23B-209ENST00000581733 ATG7O95352 703 aa8.58□□□□□ -1.04
TVP23B-209ENST00000581733 TEAD4Q15561 434 aa8.58□□□□□ -1.04
TVP23B-209ENST00000581733 DMRTC2Q8IXT2 367 aaPredicted RBP8.58□□□□□ -1.04
TVP23B-209ENST00000581733 RHPN1Q8TCX5 695 aa8.58□□□□□ -1.04
TVP23B-209ENST00000581733 NUDT16Q96DE0 195 aaKnown RBP8.58□□□□□ -1.04
TVP23B-209ENST00000581733 CFAP53Q96M91 514 aa8.58□□□□□ -1.04
TVP23B-209ENST00000581733 UBE2OQ9C0C9 1292 aaKnown RBP8.58□□□□□ -1.04
TVP23B-209ENST00000581733 ADGRL3Q9HAR2 1447 aa8.57□□□□□ -1.04
TVP23B-209ENST00000581733 TXKP42681 527 aa8.57□□□□□ -1.04
TVP23B-209ENST00000581733 PDE4CQ08493 712 aa8.57□□□□□ -1.04
TVP23B-209ENST00000581733 SH3PXD2AQ5TCZ1 1133 aa8.57□□□□□ -1.04
TVP23B-209ENST00000581733 FMR1NBQ8N0W7 255 aaPredicted RBP8.57□□□□□ -1.04
TVP23B-209ENST00000581733 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.57□□□□□ -1.04
TVP23B-209ENST00000581733 C7orf43Q8WVR3 580 aa8.57□□□□□ -1.04
TVP23B-209ENST00000581733 VRTNQ9H8Y1 702 aa8.57□□□□□ -1.04
TVP23B-209ENST00000581733 PCDHGA11Q9Y5H2 935 aa8.57□□□□□ -1.04
TVP23B-209ENST00000581733 LRRC7Q96NW7 1537 aa8.57□□□□□ -1.04
TVP23B-209ENST00000581733 STRCQ7RTU9 1775 aa8.57□□□□□ -1.04
TVP23B-209ENST00000581733 STRCP1A6NGW2 1772 aa8.56□□□□□ -1.04
TVP23B-209ENST00000581733 PDIA4P13667 645 aaKnown RBP8.56□□□□□ -1.04
TVP23B-209ENST00000581733 RETREG2Q8NC44 543 aa8.56□□□□□ -1.04
TVP23B-209ENST00000581733 HSH2DQ96JZ2 352 aa8.56□□□□□ -1.04
TVP23B-209ENST00000581733 TRAIPQ9BWF2 469 aa8.56□□□□□ -1.04
TVP23B-209ENST00000581733 SLC6A14Q9UN76 642 aa8.56□□□□□ -1.04
TVP23B-209ENST00000581733 KCNH4Q9UQ05 1017 aa8.56□□□□□ -1.04
TVP23B-209ENST00000581733 SFI1A8K8P3 1242 aa8.55□□□□□ -1.04
TVP23B-209ENST00000581733 NEFLP07196 543 aa8.55□□□□□ -1.04
TVP23B-209ENST00000581733 YBX3P16989 372 aaKnown RBP eCLIP8.55□□□□□ -1.04
TVP23B-209ENST00000581733 IREB2P48200 963 aaKnown RBP8.55□□□□□ -1.04
TVP23B-209ENST00000581733 SLC9A9Q8IVB4 645 aa8.55□□□□□ -1.04
TVP23B-209ENST00000581733 WFDC12Q8WWY7 111 aa8.55□□□□□ -1.04
TVP23B-209ENST00000581733 ZNF358Q9NW07 568 aa8.55□□□□□ -1.04
TVP23B-209ENST00000581733 GPC6Q9Y625 555 aaPredicted RBP8.55□□□□□ -1.04
TVP23B-209ENST00000581733 PIK3C2AO00443 1686 aa8.55□□□□□ -1.04
TVP23B-209ENST00000581733 MARF1Q9Y4F3 1742 aaKnown RBP8.54□□□□□ -1.04
TVP23B-209ENST00000581733 XIRP1Q702N8 1843 aaKnown RBP8.54□□□□□ -1.04
TVP23B-209ENST00000581733 LTN1O94822 1766 aa8.54□□□□□ -1.04
TVP23B-209ENST00000581733 KCNA6P17658 529 aa8.54□□□□□ -1.04
TVP23B-209ENST00000581733 SSTR4P31391 388 aa8.54□□□□□ -1.04
TVP23B-209ENST00000581733 AFF1P51825 1210 aaKnown RBP8.54□□□□□ -1.04
TVP23B-209ENST00000581733 PSME1Q06323 249 aa8.54□□□□□ -1.04
TVP23B-209ENST00000581733 NCOA4Q13772 614 aa8.54□□□□□ -1.04
TVP23B-209ENST00000581733 ELOAQ14241 798 aaKnown RBP8.54□□□□□ -1.04
TVP23B-209ENST00000581733 PSAPL1Q6NUJ1 521 aa8.54□□□□□ -1.04
TVP23B-209ENST00000581733 NGEFQ8N5V2 710 aa8.54□□□□□ -1.04
TVP23B-209ENST00000581733 USTQ9Y2C2 406 aa8.54□□□□□ -1.04
TVP23B-209ENST00000581733 USP6P35125 1406 aa8.54□□□□□ -1.04
TVP23B-209ENST00000581733 SMG6Q86US8 1419 aaKnown RBP8.54□□□□□ -1.04
TVP23B-209ENST00000581733 CDK12Q9NYV4 1490 aaPredicted RBP8.53□□□□□ -1.04
TVP23B-209ENST00000581733 SERTM1A2A2V5 107 aa8.53□□□□□ -1.04
TVP23B-209ENST00000581733 FAM196BA6NMK8 535 aa8.53□□□□□ -1.04
TVP23B-209ENST00000581733 PDE3BQ13370 1112 aa8.53□□□□□ -1.04
TVP23B-209ENST00000581733 EML3Q32P44 896 aa8.53□□□□□ -1.04
TVP23B-209ENST00000581733 TNS4Q8IZW8 715 aa8.53□□□□□ -1.04
TVP23B-209ENST00000581733 DEPDC4Q8N2C3 294 aa8.53□□□□□ -1.04
TVP23B-209ENST00000581733 MKRN1Q9UHC7 482 aaKnown RBP8.53□□□□□ -1.04
TVP23B-209ENST00000581733 ARID1BQ8NFD5 2236 aaPredicted RBP8.53□□□□□ -1.04
TVP23B-209ENST00000581733 TTC21AQ8NDW8 1320 aa8.53□□□□□ -1.04
TVP23B-209ENST00000581733 PRR36Q9H6K5 1346 aa8.53□□□□□ -1.04
TVP23B-209ENST00000581733 COL3A1P02461 1466 aaPredicted RBP8.52□□□□□ -1.05
TVP23B-209ENST00000581733 LMTK3Q96Q04 1460 aa8.52□□□□□ -1.05
TVP23B-209ENST00000581733 FYB1O15117 783 aa8.52□□□□□ -1.05
TVP23B-209ENST00000581733 NOS3P29474 1203 aa8.52□□□□□ -1.05
TVP23B-209ENST00000581733 KCNQ4P56696 695 aa8.52□□□□□ -1.05
TVP23B-209ENST00000581733 NCOA3Q9Y6Q9 1424 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms