RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 JAG2Q9Y219 1238 aa13.73□□□□□ -0.21
TOP3A-210ENST00000580713 SNAP23O00161 211 aa13.72□□□□□ -0.21
TOP3A-210ENST00000580713 TLR2O60603 784 aa13.72□□□□□ -0.21
TOP3A-210ENST00000580713 IGKV5-2P06315 115 aa13.72□□□□□ -0.21
TOP3A-210ENST00000580713 PRMT2P55345 433 aa13.72□□□□□ -0.21
TOP3A-210ENST00000580713 LACTBP83111 547 aaPredicted RBP13.72□□□□□ -0.21
TOP3A-210ENST00000580713 CHRNDQ07001 517 aa13.72□□□□□ -0.21
TOP3A-210ENST00000580713 CCDC184Q52MB2 194 aa13.72□□□□□ -0.21
TOP3A-210ENST00000580713 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.72□□□□□ -0.21
TOP3A-210ENST00000580713 UBE3BQ7Z3V4 1068 aa13.72□□□□□ -0.21
TOP3A-210ENST00000580713 ZNF804AQ7Z570 1209 aa13.72□□□□□ -0.21
TOP3A-210ENST00000580713 HELBQ8NG08 1087 aaPredicted RBP13.72□□□□□ -0.21
TOP3A-210ENST00000580713 NKX2-3Q8TAU0 364 aa13.72□□□□□ -0.21
TOP3A-210ENST00000580713 SHISA4Q96DD7 197 aa13.72□□□□□ -0.21
TOP3A-210ENST00000580713 BIN2Q9UBW5 565 aaPredicted RBP13.72□□□□□ -0.21
TOP3A-210ENST00000580713 PI4KAP2A4QPH2 592 aa13.71□□□□□ -0.21
TOP3A-210ENST00000580713 TAF5LO75529 589 aa13.71□□□□□ -0.21
TOP3A-210ENST00000580713 GNRH1P01148 92 aa13.71□□□□□ -0.21
TOP3A-210ENST00000580713 VGLL4Q14135 290 aa13.71□□□□□ -0.21
TOP3A-210ENST00000580713 WDR43Q15061 677 aaKnown RBP eCLIP13.71□□□□□ -0.21
TOP3A-210ENST00000580713 CWF19L2Q2TBE0 894 aaKnown RBP13.71□□□□□ -0.21
TOP3A-210ENST00000580713 CCDC30Q5VVM6 783 aa13.71□□□□□ -0.21
TOP3A-210ENST00000580713 KSR2Q6VAB6 950 aa13.71□□□□□ -0.21
TOP3A-210ENST00000580713 PI4KAP1Q8N8J0 262 aa13.71□□□□□ -0.21
TOP3A-210ENST00000580713 SP7Q8TDD2 431 aaPredicted RBP13.71□□□□□ -0.21
TOP3A-210ENST00000580713 TDRD3Q9H7E2 651 aaKnown RBP13.71□□□□□ -0.21
TOP3A-210ENST00000580713 ZNF70Q9UC06 446 aaPredicted RBP13.71□□□□□ -0.21
TOP3A-210ENST00000580713 LAMB1P07942 1786 aa13.71□□□□□ -0.22
TOP3A-210ENST00000580713 C19orf67A6NJJ6 358 aa13.7□□□□□ -0.22
TOP3A-210ENST00000580713 TCP10L2B9ZVM9 353 aa13.7□□□□□ -0.22
TOP3A-210ENST00000580713 CETPP11597 493 aa13.7□□□□□ -0.22
TOP3A-210ENST00000580713 FKBP1AP62942 108 aaKnown RBP13.7□□□□□ -0.22
TOP3A-210ENST00000580713 RAET1EQ8TD07 263 aa13.7□□□□□ -0.22
TOP3A-210ENST00000580713 CHMP4AQ9BY43 222 aa13.7□□□□□ -0.22
TOP3A-210ENST00000580713 ZBTB47Q9UFB7 747 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-210ENST00000580713 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-210ENST00000580713 NEURL1BA8MQ27 555 aa13.69□□□□□ -0.22
TOP3A-210ENST00000580713 BTBD19C9JJ37 291 aa13.69□□□□□ -0.22
TOP3A-210ENST00000580713 FMNL1O95466 1100 aaPredicted RBP13.69□□□□□ -0.22
TOP3A-210ENST00000580713 HOXD10P28358 340 aa13.69□□□□□ -0.22
TOP3A-210ENST00000580713 GRK4P32298 578 aa13.69□□□□□ -0.22
TOP3A-210ENST00000580713 PSMC4P43686 418 aa13.69□□□□□ -0.22
TOP3A-210ENST00000580713 TNNI2P48788 182 aa13.69□□□□□ -0.22
TOP3A-210ENST00000580713 CDAN1Q8IWY9 1227 aa13.69□□□□□ -0.22
TOP3A-210ENST00000580713 TMEM39BQ9GZU3 492 aa13.69□□□□□ -0.22
TOP3A-210ENST00000580713 RNF208Q9H0X6 261 aa13.69□□□□□ -0.22
TOP3A-210ENST00000580713 ANKRD18BA2A2Z9 1011 aa13.68□□□□□ -0.22
TOP3A-210ENST00000580713 H7C1W4 665 aa13.68□□□□□ -0.22
TOP3A-210ENST00000580713 ZBTB7BO15156 539 aaPredicted RBP13.68□□□□□ -0.22
TOP3A-210ENST00000580713 GJB1P08034 283 aa13.68□□□□□ -0.22
TOP3A-210ENST00000580713 CCL5P13501 91 aa13.68□□□□□ -0.22
TOP3A-210ENST00000580713 IL1R1P14778 569 aa13.68□□□□□ -0.22
TOP3A-210ENST00000580713 GJA8P48165 433 aa13.68□□□□□ -0.22
TOP3A-210ENST00000580713 GNAI1P63096 354 aa13.68□□□□□ -0.22
TOP3A-210ENST00000580713 SNAPC2Q13487 334 aa13.68□□□□□ -0.22
TOP3A-210ENST00000580713 C8orf58Q8NAV2 365 aa13.68□□□□□ -0.22
TOP3A-210ENST00000580713 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.68□□□□□ -0.22
TOP3A-210ENST00000580713 LRCH3Q96II8 777 aa13.68□□□□□ -0.22
TOP3A-210ENST00000580713 TRIM47Q96LD4 638 aa13.68□□□□□ -0.22
TOP3A-210ENST00000580713 PRO3102Q9H379 93 aa13.68□□□□□ -0.22
TOP3A-210ENST00000580713 SRRDQ9UH36 339 aa13.68□□□□□ -0.22
TOP3A-210ENST00000580713 TTF2Q9UNY4 1162 aaKnown RBP13.68□□□□□ -0.22
TOP3A-210ENST00000580713 ECM29Q5VYK3 1845 aa13.68□□□□□ -0.22
TOP3A-210ENST00000580713 CUL9Q8IWT3 2517 aa13.68□□□□□ -0.22
TOP3A-210ENST00000580713 MYH3P11055 1940 aa13.68□□□□□ -0.22
TOP3A-210ENST00000580713 A0A0C4DFX4 3053 aa13.67□□□□□ -0.22
TOP3A-210ENST00000580713 SPDYE5A6NIY4 337 aa13.67□□□□□ -0.22
TOP3A-210ENST00000580713 SOX1O00570 391 aaPredicted RBP13.67□□□□□ -0.22
TOP3A-210ENST00000580713 PLIN1O60240 522 aa13.67□□□□□ -0.22
TOP3A-210ENST00000580713 FARP2O94887 1054 aaPredicted RBP13.67□□□□□ -0.22
TOP3A-210ENST00000580713 ZNF853P0CG23 659 aa13.67□□□□□ -0.22
TOP3A-210ENST00000580713 MNX1P50219 401 aaPredicted RBP13.67□□□□□ -0.22
TOP3A-210ENST00000580713 UBXN2AP68543 259 aa13.67□□□□□ -0.22
TOP3A-210ENST00000580713 C15orf52Q6ZUT6 534 aaKnown RBP13.67□□□□□ -0.22
TOP3A-210ENST00000580713 SPOCK2Q92563 424 aa13.67□□□□□ -0.22
TOP3A-210ENST00000580713 TEPSINQ96N21 525 aa13.67□□□□□ -0.22
TOP3A-210ENST00000580713 ZCCHC17Q9NP64 241 aaKnown RBP13.67□□□□□ -0.22
TOP3A-210ENST00000580713 IFT57Q9NWB7 429 aa13.67□□□□□ -0.22
TOP3A-210ENST00000580713 CPA4Q9UI42 421 aa13.67□□□□□ -0.22
TOP3A-210ENST00000580713 CHMP3Q9Y3E7 222 aa13.67□□□□□ -0.22
TOP3A-210ENST00000580713 RIPOR2Q9Y4F9 1068 aa13.67□□□□□ -0.22
TOP3A-210ENST00000580713 OTOFQ9HC10 1997 aa13.67□□□□□ -0.22
TOP3A-210ENST00000580713 ZSWIM8A7E2V4 1837 aa13.67□□□□□ -0.22
TOP3A-210ENST00000580713 A0A1W2PPC1 479 aa13.66□□□□□ -0.22
TOP3A-210ENST00000580713 EVI5O60447 810 aa13.66□□□□□ -0.22
TOP3A-210ENST00000580713 OSBPP22059 807 aa13.66□□□□□ -0.22
TOP3A-210ENST00000580713 CALD1Q05682 793 aaKnown RBP13.66□□□□□ -0.22
TOP3A-210ENST00000580713 MFSD14BQ5SR56 506 aa13.66□□□□□ -0.22
TOP3A-210ENST00000580713 ERO1BQ86YB8 467 aa13.66□□□□□ -0.22
TOP3A-210ENST00000580713 DZIP1LQ8IYY4 767 aaKnown RBP13.66□□□□□ -0.22
TOP3A-210ENST00000580713 PLA2G12BQ9BX93 195 aa13.66□□□□□ -0.22
TOP3A-210ENST00000580713 STK31Q9BXU1 1019 aa13.66□□□□□ -0.22
TOP3A-210ENST00000580713 SERPINA10Q9UK55 444 aa13.66□□□□□ -0.22
TOP3A-210ENST00000580713 RANBP2P49792 3224 aaKnown RBP13.66□□□□□ -0.22
TOP3A-210ENST00000580713 MYPNQ86TC9 1320 aa13.65□□□□□ -0.22
TOP3A-210ENST00000580713 IRS2Q9Y4H2 1338 aa13.65□□□□□ -0.22
TOP3A-210ENST00000580713 IRF6O14896 467 aa13.65□□□□□ -0.22
TOP3A-210ENST00000580713 CSF1RP07333 972 aa13.65□□□□□ -0.22
TOP3A-210ENST00000580713 C17orf99Q6UX52 265 aa13.65□□□□□ -0.22
TOP3A-210ENST00000580713 UBE2Q1Q7Z7E8 422 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms