RNA–Protein interactions for RNA: ENST00000580034.2

RTTN-205, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 824 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-205ENST00000580034 DPEP1P16444 411 aa6.49□□□□□ -1.37
RTTN-205ENST00000580034 HMGB2P26583 209 aaKnown RBP6.49□□□□□ -1.37
RTTN-205ENST00000580034 RGS19P49795 217 aa6.49□□□□□ -1.37
RTTN-205ENST00000580034 TGFB2P61812 414 aa6.49□□□□□ -1.37
RTTN-205ENST00000580034 LAMC2Q13753 1193 aa6.49□□□□□ -1.37
RTTN-205ENST00000580034 AMIGO3Q86WK7 504 aa6.49□□□□□ -1.37
RTTN-205ENST00000580034 ANKRD24Q8TF21 1146 aa6.49□□□□□ -1.37
RTTN-205ENST00000580034 MPHOSPH9Q99550 1183 aa6.49□□□□□ -1.37
RTTN-205ENST00000580034 CABP1Q9NZU7 370 aa6.49□□□□□ -1.37
RTTN-205ENST00000580034 ITGB4P16144 1822 aa6.48□□□□□ -1.37
RTTN-205ENST00000580034 HSPA8P11142 646 aaKnown RBP6.48□□□□□ -1.37
RTTN-205ENST00000580034 MSX1P28360 303 aa6.48□□□□□ -1.37
RTTN-205ENST00000580034 CC2D2BQ6DHV5 1058 aa6.48□□□□□ -1.37
RTTN-205ENST00000580034 DCAF11Q8TEB1 546 aa6.48□□□□□ -1.37
RTTN-205ENST00000580034 LTV1Q96GA3 475 aaPredicted RBP6.48□□□□□ -1.37
RTTN-205ENST00000580034 CCDC87Q9NVE4 849 aa6.48□□□□□ -1.37
RTTN-205ENST00000580034 FAM229AH3BQW9 127 aa6.47□□□□□ -1.37
RTTN-205ENST00000580034 SSFA2P28290 1259 aa6.47□□□□□ -1.37
RTTN-205ENST00000580034 ERVK-9P63128 1117 aa6.47□□□□□ -1.37
RTTN-205ENST00000580034 DALRD3Q5D0E6 543 aaKnown RBP6.47□□□□□ -1.37
RTTN-205ENST00000580034 CYP2U1Q7Z449 544 aa6.47□□□□□ -1.37
RTTN-205ENST00000580034 ARHGEF10LQ9HCE6 1279 aa6.47□□□□□ -1.37
RTTN-205ENST00000580034 TTC21BQ7Z4L5 1316 aa6.47□□□□□ -1.37
RTTN-205ENST00000580034 GLTPD2A6NH11 291 aa6.46□□□□□ -1.38
RTTN-205ENST00000580034 CENPCQ03188 943 aa6.46□□□□□ -1.38
RTTN-205ENST00000580034 TRIM28Q13263 835 aaKnown RBP6.46□□□□□ -1.38
RTTN-205ENST00000580034 MPRIPQ6WCQ1 1025 aa6.46□□□□□ -1.38
RTTN-205ENST00000580034 MON2Q7Z3U7 1717 aa6.46□□□□□ -1.38
RTTN-205ENST00000580034 AVENQ9NQS1 362 aaPredicted RBP6.46□□□□□ -1.38
RTTN-205ENST00000580034 PIM2Q9P1W9 311 aa6.46□□□□□ -1.38
RTTN-205ENST00000580034 TTC21AQ8NDW8 1320 aa6.46□□□□□ -1.38
RTTN-205ENST00000580034 MEGF6O75095 1541 aa6.45□□□□□ -1.38
RTTN-205ENST00000580034 GRIK4Q16099 956 aa6.45□□□□□ -1.38
RTTN-205ENST00000580034 PARP9Q8IXQ6 854 aa6.45□□□□□ -1.38
RTTN-205ENST00000580034 ZCRB1Q8TBF4 217 aaKnown RBP6.45□□□□□ -1.38
RTTN-205ENST00000580034 RNF112Q9ULX5 631 aa6.45□□□□□ -1.38
RTTN-205ENST00000580034 PCDHGC4Q9Y5F7 938 aa6.45□□□□□ -1.38
RTTN-205ENST00000580034 PARP3Q9Y6F1 533 aa6.45□□□□□ -1.38
RTTN-205ENST00000580034 FIGNL1Q6PIW4 674 aa6.44□□□□□ -1.38
RTTN-205ENST00000580034 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.44□□□□□ -1.38
RTTN-205ENST00000580034 LINC00116Q8NCU8 138 aa6.44□□□□□ -1.38
RTTN-205ENST00000580034 ZSCAN10Q96SZ4 725 aaPredicted RBP6.44□□□□□ -1.38
RTTN-205ENST00000580034 ZCCHC2Q9C0B9 1178 aaKnown RBP6.44□□□□□ -1.38
RTTN-205ENST00000580034 CENPJQ9HC77 1338 aaPredicted RBP6.44□□□□□ -1.38
RTTN-205ENST00000580034 CASP8AP2Q9UKL3 1982 aa6.44□□□□□ -1.38
RTTN-205ENST00000580034 KTN1Q86UP2 1357 aaKnown RBP6.44□□□□□ -1.38
RTTN-205ENST00000580034 MAP2P11137 1827 aaKnown RBP6.43□□□□□ -1.38
RTTN-205ENST00000580034 DICER1Q9UPY3 1922 aaKnown RBP6.43□□□□□ -1.38
RTTN-205ENST00000580034 LMNB1P20700 586 aa6.43□□□□□ -1.38
RTTN-205ENST00000580034 CHRNA5P30532 468 aa6.43□□□□□ -1.38
RTTN-205ENST00000580034 IRAK1P51617 712 aa6.43□□□□□ -1.38
RTTN-205ENST00000580034 PCBP4P57723 403 aaKnown RBP6.43□□□□□ -1.38
RTTN-205ENST00000580034 TMF1P82094 1093 aa6.43□□□□□ -1.38
RTTN-205ENST00000580034 MAP2K1Q02750 393 aaPredicted RBP6.43□□□□□ -1.38
RTTN-205ENST00000580034 GRM1Q13255 1194 aa6.43□□□□□ -1.38
RTTN-205ENST00000580034 GNASQ5JWF2 1037 aa6.43□□□□□ -1.38
RTTN-205ENST00000580034 SMARCC1Q92922 1105 aaPredicted RBP6.43□□□□□ -1.38
RTTN-205ENST00000580034 CNKSR1Q969H4 720 aa6.43□□□□□ -1.38
RTTN-205ENST00000580034 ESYT1Q9BSJ8 1104 aa6.43□□□□□ -1.38
RTTN-205ENST00000580034 CRISPLD1Q9H336 500 aa6.43□□□□□ -1.38
RTTN-205ENST00000580034 RNF114Q9Y508 228 aa6.43□□□□□ -1.38
RTTN-205ENST00000580034 KDM6AO15550 1401 aaPredicted RBP6.42□□□□□ -1.38
RTTN-205ENST00000580034 TMEM88BA6NKF7 163 aa6.42□□□□□ -1.38
RTTN-205ENST00000580034 C9orf172C9J069 976 aa6.42□□□□□ -1.38
RTTN-205ENST00000580034 KCNA3P22001 575 aa6.42□□□□□ -1.38
RTTN-205ENST00000580034 SOX10P56693 466 aa6.42□□□□□ -1.38
RTTN-205ENST00000580034 C4orf17Q53FE4 359 aa6.42□□□□□ -1.38
RTTN-205ENST00000580034 NLGN1Q8N2Q7 840 aa6.42□□□□□ -1.38
RTTN-205ENST00000580034 MCOLN1Q9GZU1 580 aa6.42□□□□□ -1.38
RTTN-205ENST00000580034 RAB6BQ9NRW1 208 aa6.42□□□□□ -1.38
RTTN-205ENST00000580034 THSD7BQ9C0I4 1608 aa6.42□□□□□ -1.38
RTTN-205ENST00000580034 LTBP1Q14766 1721 aa6.42□□□□□ -1.38
RTTN-205ENST00000580034 DLEC1Q9Y238 1755 aa6.41□□□□□ -1.38
RTTN-205ENST00000580034 TAL1P17542 331 aaPredicted RBP6.41□□□□□ -1.38
RTTN-205ENST00000580034 GTF2E1P29083 439 aaPredicted RBP6.41□□□□□ -1.38
RTTN-205ENST00000580034 ADGRE1Q14246 886 aa6.41□□□□□ -1.38
RTTN-205ENST00000580034 TMEM214Q6NUQ4 689 aaKnown RBP6.41□□□□□ -1.38
RTTN-205ENST00000580034 NME9Q86XW9 330 aa6.41□□□□□ -1.38
RTTN-205ENST00000580034 TP53INP1Q96A56 240 aa6.41□□□□□ -1.38
RTTN-205ENST00000580034 PCMTD2Q9NV79 361 aa6.41□□□□□ -1.38
RTTN-205ENST00000580034 ABT1Q9ULW3 272 aaKnown RBP6.41□□□□□ -1.38
RTTN-205ENST00000580034 PCDH11XQ9BZA7 1347 aa6.41□□□□□ -1.38
RTTN-205ENST00000580034 PCDH11YQ9BZA8 1340 aa6.41□□□□□ -1.38
RTTN-205ENST00000580034 WDR33Q9C0J8 1336 aaKnown RBP6.41□□□□□ -1.38
RTTN-205ENST00000580034 LOC102724428A0A0B4J2F2 783 aa6.4□□□□□ -1.38
RTTN-205ENST00000580034 TRAK2O60296 914 aa6.4□□□□□ -1.38
RTTN-205ENST00000580034 ALAS2P22557 587 aa6.4□□□□□ -1.38
RTTN-205ENST00000580034 RFC4P35249 363 aa6.4□□□□□ -1.38
RTTN-205ENST00000580034 SCTRP47872 440 aa6.4□□□□□ -1.38
RTTN-205ENST00000580034 CLK2P49760 499 aaKnown RBP6.4□□□□□ -1.38
RTTN-205ENST00000580034 SIK1P57059 783 aa6.4□□□□□ -1.38
RTTN-205ENST00000580034 DGKZQ13574 1117 aa6.4□□□□□ -1.38
RTTN-205ENST00000580034 COL9A3Q14050 684 aaPredicted RBP6.4□□□□□ -1.38
RTTN-205ENST00000580034 MBTPS1Q14703 1052 aa6.4□□□□□ -1.38
RTTN-205ENST00000580034 DEFB115Q30KQ5 88 aa6.4□□□□□ -1.38
RTTN-205ENST00000580034 TRAPPC3LQ5T215 181 aa6.4□□□□□ -1.38
RTTN-205ENST00000580034 USHBP1Q8N6Y0 703 aa6.4□□□□□ -1.38
RTTN-205ENST00000580034 PNMA1Q8ND90 353 aa6.4□□□□□ -1.38
RTTN-205ENST00000580034 RAPGEF4Q8WZA2 1011 aa6.4□□□□□ -1.38
RTTN-205ENST00000580034 KRTAP4-11Q9BYQ6 195 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms