RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 FOXO4P98177 505 aa8.95□□□□□ -0.98
RNF43-204ENST00000580014 KCNH2Q12809 1159 aa8.95□□□□□ -0.98
RNF43-204ENST00000580014 RABL6Q3YEC7 729 aaPredicted RBP8.95□□□□□ -0.98
RNF43-204ENST00000580014 TPTE2Q6XPS3 522 aa8.95□□□□□ -0.98
RNF43-204ENST00000580014 RETREG2Q8NC44 543 aa8.95□□□□□ -0.98
RNF43-204ENST00000580014 ARMC2Q8NEN0 867 aa8.95□□□□□ -0.98
RNF43-204ENST00000580014 FAM89AQ96GI7 184 aa8.95□□□□□ -0.98
RNF43-204ENST00000580014 MTRQ99707 1265 aa8.95□□□□□ -0.98
RNF43-204ENST00000580014 MTFR1LQ9H019 292 aa8.95□□□□□ -0.98
RNF43-204ENST00000580014 C9orf78Q9NZ63 289 aaPredicted RBP8.95□□□□□ -0.98
RNF43-204ENST00000580014 TRMT112Q9UI30 125 aaKnown RBP8.95□□□□□ -0.98
RNF43-204ENST00000580014 NUP98P52948 1817 aa8.95□□□□□ -0.98
RNF43-204ENST00000580014 SH3TC1Q8TE82 1336 aa8.95□□□□□ -0.98
RNF43-204ENST00000580014 PALM3A6NDB9 673 aaPredicted RBP8.94□□□□□ -0.98
RNF43-204ENST00000580014 POTEMA6NI47 508 aa8.94□□□□□ -0.98
RNF43-204ENST00000580014 TLL1O43897 1013 aa8.94□□□□□ -0.98
RNF43-204ENST00000580014 GNAI2P04899 355 aa8.94□□□□□ -0.98
RNF43-204ENST00000580014 MMP10P09238 476 aa8.94□□□□□ -0.98
RNF43-204ENST00000580014 UBTFL1P0CB47 393 aaPredicted RBP8.94□□□□□ -0.98
RNF43-204ENST00000580014 HSP90B1P14625 803 aaKnown RBP8.94□□□□□ -0.98
RNF43-204ENST00000580014 PRR5LQ6MZQ0 368 aa8.94□□□□□ -0.98
RNF43-204ENST00000580014 UBE3BQ7Z3V4 1068 aa8.94□□□□□ -0.98
RNF43-204ENST00000580014 RPAP2Q8IXW5 612 aaPredicted RBP8.94□□□□□ -0.98
RNF43-204ENST00000580014 SYNE4Q8N205 404 aa8.94□□□□□ -0.98
RNF43-204ENST00000580014 ANKRD44Q8N8A2 993 aa8.94□□□□□ -0.98
RNF43-204ENST00000580014 GPKOWQ92917 476 aaPredicted RBP eCLIP8.94□□□□□ -0.98
RNF43-204ENST00000580014 SUCLG2Q96I99 432 aa8.94□□□□□ -0.98
RNF43-204ENST00000580014 GPSM3Q9Y4H4 160 aa8.94□□□□□ -0.98
RNF43-204ENST00000580014 ANKRD36CQ5JPF3 1778 aa8.94□□□□□ -0.98
RNF43-204ENST00000580014 IRS4O14654 1257 aaPredicted RBP8.93□□□□□ -0.98
RNF43-204ENST00000580014 PDE8AO60658 829 aa8.93□□□□□ -0.98
RNF43-204ENST00000580014 NEFLP07196 543 aa8.93□□□□□ -0.98
RNF43-204ENST00000580014 RFX1P22670 979 aa8.93□□□□□ -0.98
RNF43-204ENST00000580014 IRX6P78412 446 aaPredicted RBP8.93□□□□□ -0.98
RNF43-204ENST00000580014 ATP8B2P98198 1209 aa8.93□□□□□ -0.98
RNF43-204ENST00000580014 SF3B3Q15393 1217 aaKnown RBP8.93□□□□□ -0.98
RNF43-204ENST00000580014 ERFEQ4G0M1 354 aa8.93□□□□□ -0.98
RNF43-204ENST00000580014 EPHA10Q5JZY3 1008 aa8.93□□□□□ -0.98
RNF43-204ENST00000580014 BICDL1Q6ZP65 573 aa8.93□□□□□ -0.98
RNF43-204ENST00000580014 NBPF5PQ86XG9 351 aaPredicted RBP8.93□□□□□ -0.98
RNF43-204ENST00000580014 RTL9Q8NET4 1388 aa8.93□□□□□ -0.98
RNF43-204ENST00000580014 NRXN2Q9P2S2 1712 aa8.93□□□□□ -0.98
RNF43-204ENST00000580014 ABCC12Q96J65 1359 aa8.92□□□□□ -0.98
RNF43-204ENST00000580014 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.92□□□□□ -0.98
RNF43-204ENST00000580014 CRY2Q49AN0 593 aa8.92□□□□□ -0.98
RNF43-204ENST00000580014 CEP85Q6P2H3 762 aa8.92□□□□□ -0.98
RNF43-204ENST00000580014 PDXDC2PQ6P474 469 aa8.92□□□□□ -0.98
RNF43-204ENST00000580014 SIRT2Q8IXJ6 389 aa8.92□□□□□ -0.98
RNF43-204ENST00000580014 CNBD1Q8NA66 436 aa8.92□□□□□ -0.98
RNF43-204ENST00000580014 TTLL11Q8NHH1 800 aa8.92□□□□□ -0.98
RNF43-204ENST00000580014 SSH3Q8TE77 659 aa8.92□□□□□ -0.98
RNF43-204ENST00000580014 BRIP1Q9BX63 1249 aa8.92□□□□□ -0.98
RNF43-204ENST00000580014 IL21Q9HBE4 155 aa8.92□□□□□ -0.98
RNF43-204ENST00000580014 PODXL2Q9NZ53 605 aa8.92□□□□□ -0.98
RNF43-204ENST00000580014 TFIP11Q9UBB9 837 aaKnown RBP8.92□□□□□ -0.98
RNF43-204ENST00000580014 LRRFIP2Q9Y608 721 aaKnown RBP8.92□□□□□ -0.98
RNF43-204ENST00000580014 PARP3Q9Y6F1 533 aa8.92□□□□□ -0.98
RNF43-204ENST00000580014 HOXA10P31260 410 aaPredicted RBP8.91□□□□□ -0.98
RNF43-204ENST00000580014 RFX5P48382 616 aaPredicted RBP8.91□□□□□ -0.98
RNF43-204ENST00000580014 PTPN5P54829 565 aa8.91□□□□□ -0.98
RNF43-204ENST00000580014 CTSWP56202 376 aa8.91□□□□□ -0.98
RNF43-204ENST00000580014 PTK2Q05397 1052 aa8.91□□□□□ -0.98
RNF43-204ENST00000580014 HDAC1Q13547 482 aaPredicted RBP8.91□□□□□ -0.98
RNF43-204ENST00000580014 TJAP1Q5JTD0 557 aa8.91□□□□□ -0.98
RNF43-204ENST00000580014 MSL1Q68DK7 614 aa8.91□□□□□ -0.98
RNF43-204ENST00000580014 JARID2Q92833 1246 aaPredicted RBP8.91□□□□□ -0.98
RNF43-204ENST00000580014 BICC1Q9H694 974 aaKnown RBP8.91□□□□□ -0.98
RNF43-204ENST00000580014 C10orf71Q711Q0 1435 aa8.9□□□□□ -0.98
RNF43-204ENST00000580014 ZBTB7AO95365 584 aa8.9□□□□□ -0.98
RNF43-204ENST00000580014 HCLS1P14317 486 aaPredicted RBP8.9□□□□□ -0.98
RNF43-204ENST00000580014 LMOD1P29536 600 aaPredicted RBP8.9□□□□□ -0.98
RNF43-204ENST00000580014 PDE4CQ08493 712 aa8.9□□□□□ -0.98
RNF43-204ENST00000580014 LMBR1LQ6UX01 489 aa8.9□□□□□ -0.98
RNF43-204ENST00000580014 PDZRN3Q9UPQ7 1066 aa8.9□□□□□ -0.98
RNF43-204ENST00000580014 MAFBQ9Y5Q3 323 aaPredicted RBP8.9□□□□□ -0.98
RNF43-204ENST00000580014 PNMA6EA0A0J9YXQ4 647 aa8.89□□□□□ -0.99
RNF43-204ENST00000580014 FAM177BA6PVY3 158 aa8.89□□□□□ -0.99
RNF43-204ENST00000580014 ATP9BO43861 1147 aa8.89□□□□□ -0.99
RNF43-204ENST00000580014 GTF2E1P29083 439 aaPredicted RBP8.89□□□□□ -0.99
RNF43-204ENST00000580014 ST5P78524 1137 aa8.89□□□□□ -0.99
RNF43-204ENST00000580014 TBC1D9Q6ZT07 1266 aa8.89□□□□□ -0.99
RNF43-204ENST00000580014 CDAN1Q8IWY9 1227 aa8.89□□□□□ -0.99
RNF43-204ENST00000580014 ZNF592Q92610 1267 aa8.89□□□□□ -0.99
RNF43-204ENST00000580014 ZNF516Q92618 1163 aa8.89□□□□□ -0.99
RNF43-204ENST00000580014 NLRP3Q96P20 1036 aa8.89□□□□□ -0.99
RNF43-204ENST00000580014 SLC6A16Q9GZN6 736 aa8.89□□□□□ -0.99
RNF43-204ENST00000580014 COPRSQ9NQ92 184 aa8.89□□□□□ -0.99
RNF43-204ENST00000580014 PPP4R2Q9NY27 417 aa8.89□□□□□ -0.99
RNF43-204ENST00000580014 NOP58Q9Y2X3 529 aaKnown RBP8.89□□□□□ -0.99
RNF43-204ENST00000580014 SRGNP10124 158 aa8.88□□□□□ -0.99
RNF43-204ENST00000580014 POLD1P28340 1107 aa8.88□□□□□ -0.99
RNF43-204ENST00000580014 PDE6BP35913 854 aa8.88□□□□□ -0.99
RNF43-204ENST00000580014 MCCD1P59942 119 aaPredicted RBP8.88□□□□□ -0.99
RNF43-204ENST00000580014 PTPN12Q05209 780 aaKnown RBP8.88□□□□□ -0.99
RNF43-204ENST00000580014 CCDC152Q4G0S7 254 aa8.88□□□□□ -0.99
RNF43-204ENST00000580014 CRAMP1Q96RY5 1269 aa8.88□□□□□ -0.99
RNF43-204ENST00000580014 UNC93B1Q9H1C4 597 aa8.88□□□□□ -0.99
RNF43-204ENST00000580014 DCTPP1Q9H773 170 aa8.88□□□□□ -0.99
RNF43-204ENST00000580014 SPON1Q9HCB6 807 aa8.88□□□□□ -0.99
RNF43-204ENST00000580014 CD2APQ9Y5K6 639 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms