RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 RNF123Q5XPI4 1314 aa6.25□□□□□ -1.41
GAPLINC-202ENST00000579007 NPHP1O15259 732 aa6.25□□□□□ -1.41
GAPLINC-202ENST00000579007 NPR1P16066 1061 aa6.25□□□□□ -1.41
GAPLINC-202ENST00000579007 MCCD1P59942 119 aaPredicted RBP6.25□□□□□ -1.41
GAPLINC-202ENST00000579007 TAF7Q15545 349 aaPredicted RBP6.25□□□□□ -1.41
GAPLINC-202ENST00000579007 CCSER2Q9H7U1 834 aa6.25□□□□□ -1.41
GAPLINC-202ENST00000579007 NOP58Q9Y2X3 529 aaKnown RBP6.25□□□□□ -1.41
GAPLINC-202ENST00000579007 CNTNAP1P78357 1384 aa6.25□□□□□ -1.41
GAPLINC-202ENST00000579007 HTTP42858 3142 aa6.25□□□□□ -1.41
GAPLINC-202ENST00000579007 LAMB1P07942 1786 aa6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 ANXA1P04083 346 aa6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 MYL6BP14649 208 aa6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 GPTP24298 496 aa6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 DNAJB2P25686 324 aa6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 IARSP41252 1262 aaKnown RBP6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 ANAPC15P60006 121 aa6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 ECM1Q16610 540 aa6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 SUSD4Q5VX71 490 aa6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 CHRDL2Q6WN34 429 aa6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 NGEFQ8N5V2 710 aa6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 TMEM87AQ8NBN3 555 aa6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 RNF34Q969K3 372 aa6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 MS4A3Q96HJ5 214 aa6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 TAF1DQ9H5J8 278 aaPredicted RBP6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 CAPN10Q9HC96 672 aa6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 PCDHGC3Q9UN70 934 aa6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 ECM29Q5VYK3 1845 aa6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 ABCC4O15439 1325 aa6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 ERBB4Q15303 1308 aa6.24□□□□□ -1.41
GAPLINC-202ENST00000579007 ARAP2Q8WZ64 1704 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 ERVV-1B6SEH8 477 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 FZD9O00144 591 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 HSD3B2P26439 372 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 SCNN1AP37088 669 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 DPYDQ12882 1025 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 ZNF211Q13398 564 aaPredicted RBP6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 NR6A1Q15406 480 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 KRT24Q2M2I5 525 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 TMEM92Q6UXU6 159 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 LDHDQ86WU2 507 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 ZNF34Q8IZ26 560 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 MORC4Q8TE76 937 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 TSC1Q92574 1164 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 CDCA7LQ96GN5 454 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 PIF1Q9H611 641 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 CXXC1Q9P0U4 656 aaPredicted RBP6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 KLHL42Q9P2K6 505 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 TRIM35Q9UPQ4 493 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 CACNA1FO60840 1977 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 MAPK8IP3Q9UPT6 1336 aa6.23□□□□□ -1.41
GAPLINC-202ENST00000579007 CFAP99D6REC4 459 aa6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 PPEF1O14829 653 aaPredicted RBP6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 ITGBL1O95965 494 aaPredicted RBP6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 HOXA10P31260 410 aaPredicted RBP6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 SCNN1DP51172 638 aa6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 ARHGAP4P98171 946 aa6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 RNF187Q5TA31 235 aaPredicted RBP6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 ZNF746Q6NUN9 644 aaPredicted RBP6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 TPTE2Q6XPS3 522 aa6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 KIF6Q6ZMV9 814 aa6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 SYNE4Q8N205 404 aa6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 DEPDC4Q8N2C3 294 aa6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 FAM174AQ8TBP5 190 aa6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 PNISRQ8TF01 805 aaKnown RBP6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 ZSWIM4Q9H7M6 989 aa6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 TSPYL4Q9UJ04 414 aa6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 RRP7AQ9Y3A4 280 aaKnown RBP6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 CENPFP49454 3210 aa6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 CASP8AP2Q9UKL3 1982 aa6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 BRCA2P51587 3418 aa6.22□□□□□ -1.41
GAPLINC-202ENST00000579007 AKAP11Q9UKA4 1901 aa6.21□□□□□ -1.41
GAPLINC-202ENST00000579007 IQCA1LA6NCM1 817 aa6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 ZBBXA8MT70 800 aa6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 FOXN1O15353 648 aa6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 P4HBP07237 508 aaKnown RBP6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 EPHX2P34913 555 aa6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 TMPOP42166 694 aaKnown RBP6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 GCGRP47871 477 aa6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 FANCCQ00597 558 aa6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 FMR1Q06787 632 aaKnown RBP eCLIP6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 NCOA4Q13772 614 aa6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 TCEAL1Q15170 157 aa6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 MAP1SQ66K74 1059 aaPredicted RBP6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 CCDC146Q8IYE0 955 aa6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 RTKN2Q8IZC4 609 aa6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 NYXQ9GZU5 481 aa6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 TMEM134Q9H6X4 195 aa6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 HACL1Q9UJ83 578 aa6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 IQSEC3Q9UPP2 1182 aaPredicted RBP6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 MYBBP1AQ9BQG0 1328 aaKnown RBP6.21□□□□□ -1.42
GAPLINC-202ENST00000579007 OTOFQ9HC10 1997 aa6.2□□□□□ -1.42
GAPLINC-202ENST00000579007 PARNO95453 639 aaKnown RBP6.2□□□□□ -1.42
GAPLINC-202ENST00000579007 FBXO45P0C2W1 286 aa6.2□□□□□ -1.42
GAPLINC-202ENST00000579007 VEGFBP49765 207 aa6.2□□□□□ -1.42
GAPLINC-202ENST00000579007 ATP1A2P50993 1020 aa6.2□□□□□ -1.42
GAPLINC-202ENST00000579007 OCLNQ16625 522 aa6.2□□□□□ -1.42
GAPLINC-202ENST00000579007 AOC3Q16853 763 aa6.2□□□□□ -1.42
GAPLINC-202ENST00000579007 TRIM50Q86XT4 487 aa6.2□□□□□ -1.42
GAPLINC-202ENST00000579007 SMC5Q8IY18 1101 aa6.2□□□□□ -1.42
GAPLINC-202ENST00000579007 TNS4Q8IZW8 715 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms