RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 CYP7A1P22680 504 aa24.03■■□□□ 1.44
SMG8-203ENST00000578922 RPS6KB1P23443 525 aa24.03■■□□□ 1.44
SMG8-203ENST00000578922 ADGRA1Q86SQ6 560 aa24.03■■□□□ 1.44
SMG8-203ENST00000578922 STRBPQ96SI9 672 aaKnown RBP24.03■■□□□ 1.44
SMG8-203ENST00000578922 POLLQ9UGP5 575 aa24.03■■□□□ 1.44
SMG8-203ENST00000578922 ATP2B4P23634 1241 aa24.02■■□□□ 1.44
SMG8-203ENST00000578922 C6orf229H3BNL8 230 aa24.02■■□□□ 1.44
SMG8-203ENST00000578922 LIMCH1Q9UPQ0 1083 aa24.02■■□□□ 1.44
SMG8-203ENST00000578922 C2CD5Q86YS7 1000 aa24.01■■□□□ 1.43
SMG8-203ENST00000578922 LCORLQ8N3X6 602 aa24.01■■□□□ 1.43
SMG8-203ENST00000578922 CTNNA3Q9UI47 895 aa24.01■■□□□ 1.43
SMG8-203ENST00000578922 MYH13Q9UKX3 1938 aa24.01■■□□□ 1.43
SMG8-203ENST00000578922 E7EWF7 191 aa24.01■■□□□ 1.43
SMG8-203ENST00000578922 LARGE1O95461 756 aa24.01■■□□□ 1.43
SMG8-203ENST00000578922 ZNF804AQ7Z570 1209 aa24.01■■□□□ 1.43
SMG8-203ENST00000578922 TBC1D16Q8TBP0 767 aa24.01■■□□□ 1.43
SMG8-203ENST00000578922 MASTLQ96GX5 879 aa24.01■■□□□ 1.43
SMG8-203ENST00000578922 COL11A2P13942 1736 aaPredicted RBP24■■□□□ 1.43
SMG8-203ENST00000578922 CLCN1P35523 988 aa24■■□□□ 1.43
SMG8-203ENST00000578922 IMMTQ16891 758 aaKnown RBP24■■□□□ 1.43
SMG8-203ENST00000578922 SP8Q8IXZ3 490 aa24■■□□□ 1.43
SMG8-203ENST00000578922 ATP6V0A2Q9Y487 856 aa24■■□□□ 1.43
SMG8-203ENST00000578922 PRKAB2O43741 272 aa23.99■■□□□ 1.43
SMG8-203ENST00000578922 PRDX5P30044 214 aa23.99■■□□□ 1.43
SMG8-203ENST00000578922 CUL4AQ13619 759 aa23.99■■□□□ 1.43
SMG8-203ENST00000578922 LRRC2Q9BYS8 371 aa23.99■■□□□ 1.43
SMG8-203ENST00000578922 CHRNA5P30532 468 aa23.99■■□□□ 1.43
SMG8-203ENST00000578922 ALDH1B1P30837 517 aa23.99■■□□□ 1.43
SMG8-203ENST00000578922 ZNF384Q8TF68 577 aa23.99■■□□□ 1.43
SMG8-203ENST00000578922 PODXL2Q9NZ53 605 aa23.99■■□□□ 1.43
SMG8-203ENST00000578922 GOLGB1Q14789 3259 aaKnown RBP23.99■■□□□ 1.43
SMG8-203ENST00000578922 NAA16Q6N069 864 aaPredicted RBP23.98■■□□□ 1.43
SMG8-203ENST00000578922 DTNBO60941 627 aa23.98■■□□□ 1.43
SMG8-203ENST00000578922 TMC4Q7Z404 712 aa23.98■■□□□ 1.43
SMG8-203ENST00000578922 GAS2L3Q86XJ1 694 aa23.98■■□□□ 1.43
SMG8-203ENST00000578922 ZNF219Q9P2Y4 722 aaPredicted RBP23.98■■□□□ 1.43
SMG8-203ENST00000578922 H0YIN7 160 aa23.97■■□□□ 1.43
SMG8-203ENST00000578922 ZNF213O14771 459 aa23.97■■□□□ 1.43
SMG8-203ENST00000578922 RIMBP2O15034 1052 aa23.97■■□□□ 1.43
SMG8-203ENST00000578922 MECOMQ03112 1051 aa23.97■■□□□ 1.43
SMG8-203ENST00000578922 TDRD7Q8NHU6 1098 aaKnown RBP23.97■■□□□ 1.43
SMG8-203ENST00000578922 TPCN1Q9ULQ1 816 aa23.97■■□□□ 1.43
SMG8-203ENST00000578922 SLC4A4Q9Y6R1 1079 aa23.97■■□□□ 1.43
SMG8-203ENST00000578922 DDX49Q9Y6V7 483 aaKnown RBP23.97■■□□□ 1.43
SMG8-203ENST00000578922 TOB2Q14106 344 aaPredicted RBP23.96■■□□□ 1.43
SMG8-203ENST00000578922 CHST3Q7LGC8 479 aa23.96■■□□□ 1.43
SMG8-203ENST00000578922 EPB41L4AQ9HCS5 686 aaPredicted RBP23.96■■□□□ 1.43
SMG8-203ENST00000578922 PATL2C9JE40 543 aaKnown RBP23.96■■□□□ 1.43
SMG8-203ENST00000578922 Q6ZUG5 572 aa23.96■■□□□ 1.43
SMG8-203ENST00000578922 C15orf52Q6ZUT6 534 aaKnown RBP23.96■■□□□ 1.43
SMG8-203ENST00000578922 NSUN4Q96CB9 384 aaKnown RBP23.96■■□□□ 1.43
SMG8-203ENST00000578922 CD209Q9NNX6 404 aa23.96■■□□□ 1.43
SMG8-203ENST00000578922 PDS5AQ29RF7 1337 aaKnown RBP23.96■■□□□ 1.43
SMG8-203ENST00000578922 CACNA1SQ13698 1873 aa23.95■■□□□ 1.43
SMG8-203ENST00000578922 MAGEB6P1A0A0J9YX57 407 aa23.95■■□□□ 1.42
SMG8-203ENST00000578922 DYNLL1P63167 89 aaKnown RBP23.95■■□□□ 1.42
SMG8-203ENST00000578922 PKP1Q13835 747 aa23.95■■□□□ 1.42
SMG8-203ENST00000578922 ME3Q16798 604 aa23.95■■□□□ 1.42
SMG8-203ENST00000578922 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.95■■□□□ 1.42
SMG8-203ENST00000578922 QSER1Q2KHR3 1735 aa23.95■■□□□ 1.42
SMG8-203ENST00000578922 CCDC83Q8IWF9 413 aa23.95■■□□□ 1.42
SMG8-203ENST00000578922 IFNL3Q8IZI9 196 aa23.95■■□□□ 1.42
SMG8-203ENST00000578922 MPNDQ8N594 471 aa23.95■■□□□ 1.42
SMG8-203ENST00000578922 NECAB1Q8N987 351 aa23.95■■□□□ 1.42
SMG8-203ENST00000578922 GSG1L2A8MUP6 293 aa23.94■■□□□ 1.42
SMG8-203ENST00000578922 FGD1P98174 961 aa23.94■■□□□ 1.42
SMG8-203ENST00000578922 NAPBQ9H115 298 aa23.94■■□□□ 1.42
SMG8-203ENST00000578922 LRRC37AA6NMS7 1700 aa23.94■■□□□ 1.42
SMG8-203ENST00000578922 LAMA4Q16363 1823 aa23.94■■□□□ 1.42
SMG8-203ENST00000578922 DPP8Q6V1X1 898 aaPredicted RBP23.93■■□□□ 1.42
SMG8-203ENST00000578922 DHX32Q7L7V1 743 aaKnown RBP23.93■■□□□ 1.42
SMG8-203ENST00000578922 SDR42E1Q8WUS8 393 aa23.93■■□□□ 1.42
SMG8-203ENST00000578922 GRIK5Q16478 980 aa23.93■■□□□ 1.42
SMG8-203ENST00000578922 INTS4Q96HW7 963 aaKnown RBP23.93■■□□□ 1.42
SMG8-203ENST00000578922 NBPF3Q9H094 633 aa23.93■■□□□ 1.42
SMG8-203ENST00000578922 TMX4Q9H1E5 349 aaPredicted RBP23.93■■□□□ 1.42
SMG8-203ENST00000578922 HMGB1P09429 215 aaKnown RBP23.92■■□□□ 1.42
SMG8-203ENST00000578922 TDO2P48775 406 aa23.92■■□□□ 1.42
SMG8-203ENST00000578922 STK3Q13188 491 aa23.92■■□□□ 1.42
SMG8-203ENST00000578922 ANKRD1Q15327 319 aa23.92■■□□□ 1.42
SMG8-203ENST00000578922 DZIP1Q86YF9 867 aaKnown RBP23.92■■□□□ 1.42
SMG8-203ENST00000578922 WDR66Q8TBY9 1149 aa23.92■■□□□ 1.42
SMG8-203ENST00000578922 RIOK1Q9BRS2 568 aaKnown RBP23.92■■□□□ 1.42
SMG8-203ENST00000578922 ZNF445P59923 1031 aa23.92■■□□□ 1.42
SMG8-203ENST00000578922 TBC1D10CQ8IV04 446 aa23.92■■□□□ 1.42
SMG8-203ENST00000578922 BRF1Q92994 677 aa23.92■■□□□ 1.42
SMG8-203ENST00000578922 ZSCAN31Q96LW9 406 aaPredicted RBP23.92■■□□□ 1.42
SMG8-203ENST00000578922 LTBP1Q14766 1721 aa23.91■■□□□ 1.42
SMG8-203ENST00000578922 GNAT2P19087 354 aa23.91■■□□□ 1.42
SMG8-203ENST00000578922 MCTP1Q6DN14 999 aa23.91■■□□□ 1.42
SMG8-203ENST00000578922 TRIM44Q96DX7 344 aaPredicted RBP23.91■■□□□ 1.42
SMG8-203ENST00000578922 AATFQ9NY61 560 aaKnown RBP eCLIP23.91■■□□□ 1.42
SMG8-203ENST00000578922 LDHBP07195 334 aaKnown RBP23.91■■□□□ 1.42
SMG8-203ENST00000578922 ALDH8A1Q9H2A2 487 aaPredicted RBP23.91■■□□□ 1.42
SMG8-203ENST00000578922 SH2B1Q9NRF2 756 aaPredicted RBP23.91■■□□□ 1.42
SMG8-203ENST00000578922 LMBRD1Q9NUN5 540 aa23.91■■□□□ 1.42
SMG8-203ENST00000578922 IL1R1P14778 569 aa23.9■■□□□ 1.42
SMG8-203ENST00000578922 EXOSC10Q01780 885 aaKnown RBP23.9■■□□□ 1.42
SMG8-203ENST00000578922 CTDSPL2Q05D32 466 aa23.9■■□□□ 1.42
SMG8-203ENST00000578922 CCDC173Q0VFZ6 552 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms