RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 SLC27A3Q5K4L6 730 aa11.77□□□□□ -0.52
RTTN-202ENST00000578780 CDC5LQ99459 802 aaKnown RBP11.77□□□□□ -0.52
RTTN-202ENST00000578780 KCNF1Q9H3M0 494 aa11.77□□□□□ -0.52
RTTN-202ENST00000578780 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.77□□□□□ -0.52
RTTN-202ENST00000578780 USP25Q9UHP3 1055 aa11.77□□□□□ -0.52
RTTN-202ENST00000578780 ABCC12Q96J65 1359 aa11.77□□□□□ -0.52
RTTN-202ENST00000578780 FGFR2P21802 821 aa11.77□□□□□ -0.53
RTTN-202ENST00000578780 ZAP70P43403 619 aa11.77□□□□□ -0.53
RTTN-202ENST00000578780 KMT5BQ4FZB7 885 aa11.77□□□□□ -0.53
RTTN-202ENST00000578780 TPTE2Q6XPS3 522 aa11.77□□□□□ -0.53
RTTN-202ENST00000578780 CCDC129Q6ZRS4 1044 aa11.77□□□□□ -0.53
RTTN-202ENST00000578780 TICAM2Q86XR7 235 aa11.77□□□□□ -0.53
RTTN-202ENST00000578780 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.76□□□□□ -0.53
RTTN-202ENST00000578780 TRIM66O15016 1216 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 CCDC172P0C7W6 258 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 ZKSCAN1P17029 563 aaPredicted RBP11.76□□□□□ -0.53
RTTN-202ENST00000578780 SLFNL1Q499Z3 407 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 CREB3L3Q68CJ9 461 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 KCNB2Q92953 911 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 ZDHHC9Q9Y397 364 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 SNAP23O00161 211 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 RNF113AO15541 343 aaKnown RBP11.76□□□□□ -0.53
RTTN-202ENST00000578780 SLC5A1P13866 664 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 ADRA2BP18089 450 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 CASQ1P31415 396 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 MCAMP43121 646 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 UVSSAQ2YD98 709 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 CCDC102BQ68D86 513 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 PI16Q6UXB8 463 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 ANKRD18AQ8IVF6 992 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 CCDC24Q8N4L8 307 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 ZNF512BQ96KM6 892 aaPredicted RBP11.76□□□□□ -0.53
RTTN-202ENST00000578780 NLRP3Q96P20 1036 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 BRMS1Q9HCU9 246 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 HELLSQ9NRZ9 838 aa11.76□□□□□ -0.53
RTTN-202ENST00000578780 SLC27A2O14975 620 aa11.75□□□□□ -0.53
RTTN-202ENST00000578780 PHKA1P46020 1223 aa11.75□□□□□ -0.53
RTTN-202ENST00000578780 CHRNDQ07001 517 aa11.75□□□□□ -0.53
RTTN-202ENST00000578780 LRRFIP1Q32MZ4 808 aaKnown RBP11.75□□□□□ -0.53
RTTN-202ENST00000578780 ZMYM1Q5SVZ6 1142 aa11.75□□□□□ -0.53
RTTN-202ENST00000578780 SYT10Q6XYQ8 523 aa11.75□□□□□ -0.53
RTTN-202ENST00000578780 NOL8Q76FK4 1167 aaKnown RBP11.75□□□□□ -0.53
RTTN-202ENST00000578780 TMX3Q96JJ7 454 aa11.75□□□□□ -0.53
RTTN-202ENST00000578780 NOL10Q9BSC4 688 aaKnown RBP11.75□□□□□ -0.53
RTTN-202ENST00000578780 NPHP1O15259 732 aa11.75□□□□□ -0.53
RTTN-202ENST00000578780 UQCRFS1P1P0C7P4 283 aa11.75□□□□□ -0.53
RTTN-202ENST00000578780 CASTP20810 708 aaKnown RBP11.75□□□□□ -0.53
RTTN-202ENST00000578780 ADCK5Q3MIX3 580 aa11.75□□□□□ -0.53
RTTN-202ENST00000578780 RNF20Q5VTR2 975 aa11.75□□□□□ -0.53
RTTN-202ENST00000578780 JAKMIP1Q96N16 626 aaKnown RBP11.75□□□□□ -0.53
RTTN-202ENST00000578780 SPEF2Q9C093 1822 aa11.75□□□□□ -0.53
RTTN-202ENST00000578780 SMTNL1A8MU46 457 aa11.74□□□□□ -0.53
RTTN-202ENST00000578780 NFIXQ14938 502 aa11.74□□□□□ -0.53
RTTN-202ENST00000578780 TXNRD1Q16881 649 aa11.74□□□□□ -0.53
RTTN-202ENST00000578780 TSGA10IPQ3SY00 556 aa11.74□□□□□ -0.53
RTTN-202ENST00000578780 MUM1L1Q5H9M0 696 aa11.74□□□□□ -0.53
RTTN-202ENST00000578780 ZNF397Q8NF99 534 aaPredicted RBP11.74□□□□□ -0.53
RTTN-202ENST00000578780 TOMM22Q9NS69 142 aa11.74□□□□□ -0.53
RTTN-202ENST00000578780 LCMT1Q9UIC8 334 aa11.74□□□□□ -0.53
RTTN-202ENST00000578780 C4AP0C0L4 1744 aa11.74□□□□□ -0.53
RTTN-202ENST00000578780 MYO1CO00159 1063 aa11.74□□□□□ -0.53
RTTN-202ENST00000578780 CPA1P15085 419 aa11.74□□□□□ -0.53
RTTN-202ENST00000578780 ARID4AP29374 1257 aaPredicted RBP11.74□□□□□ -0.53
RTTN-202ENST00000578780 C10orf67Q8IYJ2 551 aa11.74□□□□□ -0.53
RTTN-202ENST00000578780 PROM2Q8N271 834 aa11.74□□□□□ -0.53
RTTN-202ENST00000578780 GPATCH11Q8N954 259 aa11.74□□□□□ -0.53
RTTN-202ENST00000578780 TM6SF1Q9BZW5 370 aa11.74□□□□□ -0.53
RTTN-202ENST00000578780 BSDC1Q9NW68 430 aaPredicted RBP11.74□□□□□ -0.53
RTTN-202ENST00000578780 COL24A1Q17RW2 1714 aa11.73□□□□□ -0.53
RTTN-202ENST00000578780 COL4A1P02462 1669 aa11.73□□□□□ -0.53
RTTN-202ENST00000578780 CARMIL3Q8ND23 1372 aa11.73□□□□□ -0.53
RTTN-202ENST00000578780 ZFYP08048 801 aaPredicted RBP11.73□□□□□ -0.53
RTTN-202ENST00000578780 RXRBP28702 533 aa11.73□□□□□ -0.53
RTTN-202ENST00000578780 CELF1Q92879 486 aaKnown RBP11.73□□□□□ -0.53
RTTN-202ENST00000578780 TTC14Q96N46 770 aa11.73□□□□□ -0.53
RTTN-202ENST00000578780 ZSWIM6Q9HCJ5 1215 aa11.73□□□□□ -0.53
RTTN-202ENST00000578780 U3KPZ7 1027 aaPredicted RBP11.73□□□□□ -0.53
RTTN-202ENST00000578780 MAST3O60307 1309 aa11.73□□□□□ -0.53
RTTN-202ENST00000578780 MBD3O95983 291 aa11.72□□□□□ -0.53
RTTN-202ENST00000578780 TTF1Q15361 905 aaPredicted RBP11.72□□□□□ -0.53
RTTN-202ENST00000578780 WASHC4Q2M389 1173 aa11.72□□□□□ -0.53
RTTN-202ENST00000578780 ZGPATQ8N5A5 531 aaKnown RBP11.72□□□□□ -0.53
RTTN-202ENST00000578780 HMG20BQ9P0W2 317 aa11.72□□□□□ -0.53
RTTN-202ENST00000578780 CYP46A1Q9Y6A2 500 aa11.72□□□□□ -0.53
RTTN-202ENST00000578780 M0R2C6 588 aa11.72□□□□□ -0.53
RTTN-202ENST00000578780 GYS1P13807 737 aa11.72□□□□□ -0.53
RTTN-202ENST00000578780 PSMA5P28066 241 aa11.72□□□□□ -0.53
RTTN-202ENST00000578780 AK2P54819 239 aa11.72□□□□□ -0.53
RTTN-202ENST00000578780 RPS8P62241 208 aaKnown RBP11.72□□□□□ -0.53
RTTN-202ENST00000578780 OSBP2Q969R2 916 aa11.72□□□□□ -0.53
RTTN-202ENST00000578780 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.72□□□□□ -0.53
RTTN-202ENST00000578780 CWC22Q9HCG8 908 aaKnown RBP11.72□□□□□ -0.53
RTTN-202ENST00000578780 PDRG1Q9NUG6 133 aa11.72□□□□□ -0.53
RTTN-202ENST00000578780 MINPP1Q9UNW1 487 aa11.72□□□□□ -0.53
RTTN-202ENST00000578780 APBA3O96018 575 aa11.71□□□□□ -0.53
RTTN-202ENST00000578780 BCAMP50895 628 aa11.71□□□□□ -0.53
RTTN-202ENST00000578780 SATB1Q01826 763 aa11.71□□□□□ -0.53
RTTN-202ENST00000578780 CUL4AQ13619 759 aa11.71□□□□□ -0.53
RTTN-202ENST00000578780 VPS53Q5VIR6 699 aa11.71□□□□□ -0.53
RTTN-202ENST00000578780 FAM43BQ6ZT52 329 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms