RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 ABCF2Q9UG63 623 aa26.62■■□□□ 1.85
CDC42EP4-203ENST00000578516 UQCRFS1P1P0C7P4 283 aa26.61■■□□□ 1.85
CDC42EP4-203ENST00000578516 ZAP70P43403 619 aa26.61■■□□□ 1.85
CDC42EP4-203ENST00000578516 CRKP46108 304 aa26.61■■□□□ 1.85
CDC42EP4-203ENST00000578516 RBM5P52756 815 aaKnown RBP eCLIP26.61■■□□□ 1.85
CDC42EP4-203ENST00000578516 HDAC1Q13547 482 aaPredicted RBP26.61■■□□□ 1.85
CDC42EP4-203ENST00000578516 CCDC158Q5M9N0 1113 aa26.61■■□□□ 1.85
CDC42EP4-203ENST00000578516 OTUD7AQ8TE49 926 aaPredicted RBP26.61■■□□□ 1.85
CDC42EP4-203ENST00000578516 PRMT6Q96LA8 375 aaPredicted RBP26.61■■□□□ 1.85
CDC42EP4-203ENST00000578516 PGAP2Q9UHJ9 254 aa26.61■■□□□ 1.85
CDC42EP4-203ENST00000578516 CLRN2A0PK11 232 aa26.6■■□□□ 1.85
CDC42EP4-203ENST00000578516 IFIT2P09913 472 aaKnown RBP26.6■■□□□ 1.85
CDC42EP4-203ENST00000578516 DLGAP5Q15398 846 aa26.6■■□□□ 1.85
CDC42EP4-203ENST00000578516 TSHZ3Q63HK5 1081 aa26.6■■□□□ 1.85
CDC42EP4-203ENST00000578516 USP48Q86UV5 1035 aa26.6■■□□□ 1.85
CDC42EP4-203ENST00000578516 PASKQ96RG2 1323 aa26.6■■□□□ 1.85
CDC42EP4-203ENST00000578516 SALL1Q9NSC2 1324 aa26.6■■□□□ 1.85
CDC42EP4-203ENST00000578516 ZNF384Q8TF68 577 aa26.59■■□□□ 1.85
CDC42EP4-203ENST00000578516 PDS5AQ29RF7 1337 aaKnown RBP26.59■■□□□ 1.85
CDC42EP4-203ENST00000578516 SPDYE2BA6NHP3 402 aa26.58■■□□□ 1.85
CDC42EP4-203ENST00000578516 LDHBP07195 334 aaKnown RBP26.58■■□□□ 1.85
CDC42EP4-203ENST00000578516 SPDYE6P0CI01 402 aa26.58■■□□□ 1.85
CDC42EP4-203ENST00000578516 PIH1D3Q9NQM4 214 aaKnown RBP26.58■■□□□ 1.85
CDC42EP4-203ENST00000578516 ZBTB22O15209 634 aa26.57■■□□□ 1.84
CDC42EP4-203ENST00000578516 CYP2E1P05181 493 aaPredicted RBP26.57■■□□□ 1.84
CDC42EP4-203ENST00000578516 ZC3H15Q8WU90 426 aaKnown RBP26.57■■□□□ 1.84
CDC42EP4-203ENST00000578516 EDC3Q96F86 508 aaKnown RBP26.57■■□□□ 1.84
CDC42EP4-203ENST00000578516 ANTXR1Q9H6X2 564 aa26.57■■□□□ 1.84
CDC42EP4-203ENST00000578516 MYH7P12883 1935 aa26.57■■□□□ 1.84
CDC42EP4-203ENST00000578516 AAMPQ13685 434 aa26.56■■□□□ 1.84
CDC42EP4-203ENST00000578516 PRAMEF18Q5VWM3 479 aa26.56■■□□□ 1.84
CDC42EP4-203ENST00000578516 KRT26Q7Z3Y9 468 aa26.56■■□□□ 1.84
CDC42EP4-203ENST00000578516 MTMR14Q8NCE2 650 aa26.56■■□□□ 1.84
CDC42EP4-203ENST00000578516 TDRD3Q9H7E2 651 aaKnown RBP26.56■■□□□ 1.84
CDC42EP4-203ENST00000578516 HSPA6P17066 643 aa26.55■■□□□ 1.84
CDC42EP4-203ENST00000578516 TEKT1Q969V4 418 aa26.55■■□□□ 1.84
CDC42EP4-203ENST00000578516 DCPSQ96C86 337 aaKnown RBP26.55■■□□□ 1.84
CDC42EP4-203ENST00000578516 ZNF512BQ96KM6 892 aaPredicted RBP26.55■■□□□ 1.84
CDC42EP4-203ENST00000578516 SERPINA10Q9UK55 444 aa26.55■■□□□ 1.84
CDC42EP4-203ENST00000578516 DAGLAQ9Y4D2 1042 aa26.55■■□□□ 1.84
CDC42EP4-203ENST00000578516 CDK5RAP2Q96SN8 1893 aa26.55■■□□□ 1.84
CDC42EP4-203ENST00000578516 CACNB3P54284 484 aa26.54■■□□□ 1.84
CDC42EP4-203ENST00000578516 ANKRD45Q5TZF3 282 aa26.54■■□□□ 1.84
CDC42EP4-203ENST00000578516 B4GALNT3Q6L9W6 998 aa26.54■■□□□ 1.84
CDC42EP4-203ENST00000578516 ZNF408Q9H9D4 720 aa26.54■■□□□ 1.84
CDC42EP4-203ENST00000578516 SUGT1Q9Y2Z0 365 aa26.54■■□□□ 1.84
CDC42EP4-203ENST00000578516 MECOMQ03112 1051 aa26.53■■□□□ 1.84
CDC42EP4-203ENST00000578516 ERICH6Q7L0X2 663 aa26.53■■□□□ 1.84
CDC42EP4-203ENST00000578516 DZIP1Q86YF9 867 aaKnown RBP26.53■■□□□ 1.84
CDC42EP4-203ENST00000578516 DNAJC2Q99543 621 aaKnown RBP26.53■■□□□ 1.84
CDC42EP4-203ENST00000578516 BOLA2Q9H3K6 86 aa26.53■■□□□ 1.84
CDC42EP4-203ENST00000578516 VEZTQ9HBM0 779 aa26.53■■□□□ 1.84
CDC42EP4-203ENST00000578516 MAST3O60307 1309 aa26.53■■□□□ 1.84
CDC42EP4-203ENST00000578516 APOBEC3HQ6NTF7 200 aaKnown RBP26.52■■□□□ 1.84
CDC42EP4-203ENST00000578516 CDC37L1Q7L3B6 337 aa26.52■■□□□ 1.84
CDC42EP4-203ENST00000578516 RWDD1Q9H446 243 aaPredicted RBP26.52■■□□□ 1.84
CDC42EP4-203ENST00000578516 RAI14Q9P0K7 980 aa26.52■■□□□ 1.84
CDC42EP4-203ENST00000578516 ZNF70Q9UC06 446 aaPredicted RBP26.52■■□□□ 1.84
CDC42EP4-203ENST00000578516 SULF1Q8IWU6 871 aa26.51■■□□□ 1.83
CDC42EP4-203ENST00000578516 SMC5Q8IY18 1101 aa26.51■■□□□ 1.83
CDC42EP4-203ENST00000578516 ZGPATQ8N5A5 531 aaKnown RBP26.51■■□□□ 1.83
CDC42EP4-203ENST00000578516 ZDHHC15Q96MV8 337 aa26.51■■□□□ 1.83
CDC42EP4-203ENST00000578516 PITPNM2Q9BZ72 1349 aa26.5■■□□□ 1.83
CDC42EP4-203ENST00000578516 APLP1P51693 650 aa26.5■■□□□ 1.83
CDC42EP4-203ENST00000578516 HDLBPQ00341 1268 aaKnown RBP26.5■■□□□ 1.83
CDC42EP4-203ENST00000578516 SPDYE2Q495Y8 402 aa26.5■■□□□ 1.83
CDC42EP4-203ENST00000578516 GCC1Q96CN9 775 aa26.5■■□□□ 1.83
CDC42EP4-203ENST00000578516 CDCA5Q96FF9 252 aa26.5■■□□□ 1.83
CDC42EP4-203ENST00000578516 LNPKQ9C0E8 428 aa26.5■■□□□ 1.83
CDC42EP4-203ENST00000578516 LRP2BPQ9P2M1 347 aa26.5■■□□□ 1.83
CDC42EP4-203ENST00000578516 CST9Q5W186 159 aa26.49■■□□□ 1.83
CDC42EP4-203ENST00000578516 HHIPL2Q6UWX4 724 aa26.49■■□□□ 1.83
CDC42EP4-203ENST00000578516 CDAN1Q8IWY9 1227 aa26.49■■□□□ 1.83
CDC42EP4-203ENST00000578516 NSUN4Q96CB9 384 aaKnown RBP26.49■■□□□ 1.83
CDC42EP4-203ENST00000578516 GAKO14976 1311 aa26.48■■□□□ 1.83
CDC42EP4-203ENST00000578516 TCP10L2B9ZVM9 353 aa26.48■■□□□ 1.83
CDC42EP4-203ENST00000578516 GOLIM4O00461 696 aa26.48■■□□□ 1.83
CDC42EP4-203ENST00000578516 CELF2O95319 508 aaKnown RBP26.48■■□□□ 1.83
CDC42EP4-203ENST00000578516 MMP14P50281 582 aa26.48■■□□□ 1.83
CDC42EP4-203ENST00000578516 SPTY2D1Q68D10 685 aaPredicted RBP26.48■■□□□ 1.83
CDC42EP4-203ENST00000578516 ADGRA1Q86SQ6 560 aa26.48■■□□□ 1.83
CDC42EP4-203ENST00000578516 SSC5DA1L4H1 1573 aa26.48■■□□□ 1.83
CDC42EP4-203ENST00000578516 AK9Q5TCS8 1911 aa26.47■■□□□ 1.83
CDC42EP4-203ENST00000578516 MROH7-TTC4A0A0A0MT08 1334 aa26.47■■□□□ 1.83
CDC42EP4-203ENST00000578516 SALL3Q9BXA9 1300 aa26.47■■□□□ 1.83
CDC42EP4-203ENST00000578516 IDH1O75874 414 aaKnown RBP26.47■■□□□ 1.83
CDC42EP4-203ENST00000578516 CENPBP07199 599 aaPredicted RBP26.47■■□□□ 1.83
CDC42EP4-203ENST00000578516 ATP5JP18859 108 aa26.47■■□□□ 1.83
CDC42EP4-203ENST00000578516 APOBEC3FQ8IUX4 373 aaKnown RBP26.47■■□□□ 1.83
CDC42EP4-203ENST00000578516 CHGBP05060 677 aa26.46■■□□□ 1.83
CDC42EP4-203ENST00000578516 SLFNL1Q499Z3 407 aa26.46■■□□□ 1.83
CDC42EP4-203ENST00000578516 CDC42EP5Q6NZY7 148 aa26.46■■□□□ 1.83
CDC42EP4-203ENST00000578516 ECHDC1Q9NTX5 307 aa26.46■■□□□ 1.83
CDC42EP4-203ENST00000578516 FZD1Q9UP38 647 aa26.46■■□□□ 1.83
CDC42EP4-203ENST00000578516 FOCADQ5VW36 1801 aa26.46■■□□□ 1.83
CDC42EP4-203ENST00000578516 CNTNAP1P78357 1384 aa26.46■■□□□ 1.83
CDC42EP4-203ENST00000578516 MYO1BO43795 1136 aa26.45■■□□□ 1.82
CDC42EP4-203ENST00000578516 MAP4K4O95819 1239 aaPredicted RBP26.45■■□□□ 1.82
CDC42EP4-203ENST00000578516 BTDP43251 543 aa26.45■■□□□ 1.82
CDC42EP4-203ENST00000578516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms