RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 ZAP70P43403 619 aa9.72□□□□□ -0.85
SKA2-203ENST00000578105 MAP3K12Q12852 859 aa9.72□□□□□ -0.85
SKA2-203ENST00000578105 TRDNQ13061 729 aa9.72□□□□□ -0.85
SKA2-203ENST00000578105 WASHC4Q2M389 1173 aa9.72□□□□□ -0.85
SKA2-203ENST00000578105 IFFO2Q5TF58 517 aa9.72□□□□□ -0.85
SKA2-203ENST00000578105 RALYLQ86SE5 291 aaKnown RBP9.72□□□□□ -0.85
SKA2-203ENST00000578105 MARCH10Q8NA82 808 aaPredicted RBP9.72□□□□□ -0.85
SKA2-203ENST00000578105 OSBP2Q969R2 916 aa9.72□□□□□ -0.85
SKA2-203ENST00000578105 ARXQ96QS3 562 aa9.72□□□□□ -0.85
SKA2-203ENST00000578105 SEC62Q99442 399 aaKnown RBP9.72□□□□□ -0.85
SKA2-203ENST00000578105 DDX19AQ9NUU7 478 aaKnown RBP9.72□□□□□ -0.85
SKA2-203ENST00000578105 SPATA31A6Q5VVP1 1343 aa9.72□□□□□ -0.85
SKA2-203ENST00000578105 DOCK2Q92608 1830 aa9.72□□□□□ -0.85
SKA2-203ENST00000578105 DDX60Q8IY21 1712 aaKnown RBP9.71□□□□□ -0.85
SKA2-203ENST00000578105 A0A0G2JS52 829 aa9.71□□□□□ -0.86
SKA2-203ENST00000578105 H3BQV1 296 aa9.71□□□□□ -0.86
SKA2-203ENST00000578105 GPAA1O43292 621 aa9.71□□□□□ -0.86
SKA2-203ENST00000578105 NTSR2O95665 410 aa9.71□□□□□ -0.86
SKA2-203ENST00000578105 ADORA1P30542 326 aa9.71□□□□□ -0.86
SKA2-203ENST00000578105 MCAMP43121 646 aa9.71□□□□□ -0.86
SKA2-203ENST00000578105 SF3B3Q15393 1217 aaKnown RBP9.71□□□□□ -0.86
SKA2-203ENST00000578105 SUSD4Q5VX71 490 aa9.71□□□□□ -0.86
SKA2-203ENST00000578105 CCDC102BQ68D86 513 aa9.71□□□□□ -0.86
SKA2-203ENST00000578105 CCDC129Q6ZRS4 1044 aa9.71□□□□□ -0.86
SKA2-203ENST00000578105 NECAB1Q8N987 351 aa9.71□□□□□ -0.86
SKA2-203ENST00000578105 BRF1Q92994 677 aa9.71□□□□□ -0.86
SKA2-203ENST00000578105 TMEM87BQ96K49 555 aa9.71□□□□□ -0.86
SKA2-203ENST00000578105 ZNF396Q96N95 335 aaPredicted RBP9.71□□□□□ -0.86
SKA2-203ENST00000578105 PANK2Q9BZ23 570 aa9.71□□□□□ -0.86
SKA2-203ENST00000578105 NYXQ9GZU5 481 aa9.71□□□□□ -0.86
SKA2-203ENST00000578105 CNNM2Q9H8M5 875 aa9.71□□□□□ -0.86
SKA2-203ENST00000578105 GNL3LQ9NVN8 582 aaKnown RBP9.71□□□□□ -0.86
SKA2-203ENST00000578105 CNPY2Q9Y2B0 182 aa9.71□□□□□ -0.86
SKA2-203ENST00000578105 PDS5AQ29RF7 1337 aaKnown RBP9.71□□□□□ -0.86
SKA2-203ENST00000578105 SCN7AQ01118 1682 aa9.71□□□□□ -0.86
SKA2-203ENST00000578105 SYCE3A1L190 88 aa9.7□□□□□ -0.86
SKA2-203ENST00000578105 GOLGA6L4A6NEF3 574 aa9.7□□□□□ -0.86
SKA2-203ENST00000578105 M0R2C6 588 aa9.7□□□□□ -0.86
SKA2-203ENST00000578105 SEMA3EO15041 775 aa9.7□□□□□ -0.86
SKA2-203ENST00000578105 CDKL5O76039 1030 aa9.7□□□□□ -0.86
SKA2-203ENST00000578105 ADAMTS2O95450 1211 aa9.7□□□□□ -0.86
SKA2-203ENST00000578105 FGAP02671 866 aa9.7□□□□□ -0.86
SKA2-203ENST00000578105 RCAN1P53805 252 aa9.7□□□□□ -0.86
SKA2-203ENST00000578105 DNM1Q05193 864 aaKnown RBP9.7□□□□□ -0.86
SKA2-203ENST00000578105 UBE4AQ14139 1066 aa9.7□□□□□ -0.86
SKA2-203ENST00000578105 SLC10A5Q5PT55 438 aa9.7□□□□□ -0.86
SKA2-203ENST00000578105 FOXD4L5Q5VV16 416 aaPredicted RBP9.7□□□□□ -0.86
SKA2-203ENST00000578105 CPLX2Q6PUV4 134 aaKnown RBP9.7□□□□□ -0.86
SKA2-203ENST00000578105 STOX1Q6ZVD7 989 aa9.7□□□□□ -0.86
SKA2-203ENST00000578105 FNBP4Q8N3X1 1017 aaPredicted RBP9.7□□□□□ -0.86
SKA2-203ENST00000578105 FOXD4L4Q8WXT5 416 aaPredicted RBP9.7□□□□□ -0.86
SKA2-203ENST00000578105 PNPLA7Q6ZV29 1317 aa9.7□□□□□ -0.86
SKA2-203ENST00000578105 SALL1Q9NSC2 1324 aa9.7□□□□□ -0.86
SKA2-203ENST00000578105 TCHHQ07283 1943 aa9.7□□□□□ -0.86
SKA2-203ENST00000578105 ESPNB1AK53 854 aa9.69□□□□□ -0.86
SKA2-203ENST00000578105 CTAGE5O15320 804 aa9.69□□□□□ -0.86
SKA2-203ENST00000578105 FIBPO43427 364 aa9.69□□□□□ -0.86
SKA2-203ENST00000578105 PCP11498 1178 aaKnown RBP9.69□□□□□ -0.86
SKA2-203ENST00000578105 PDIA3P30101 505 aaKnown RBP9.69□□□□□ -0.86
SKA2-203ENST00000578105 SCRN1Q12765 414 aa9.69□□□□□ -0.86
SKA2-203ENST00000578105 RESTQ13127 1097 aa9.69□□□□□ -0.86
SKA2-203ENST00000578105 SLC9C2Q5TAH2 1124 aa9.69□□□□□ -0.86
SKA2-203ENST00000578105 NHSQ6T4R5 1651 aa9.69□□□□□ -0.86
SKA2-203ENST00000578105 MB21D2Q8IYB1 491 aaPredicted RBP9.69□□□□□ -0.86
SKA2-203ENST00000578105 SPATA5Q8NB90 893 aa9.69□□□□□ -0.86
SKA2-203ENST00000578105 NSUN7Q8NE18 718 aaKnown RBP9.69□□□□□ -0.86
SKA2-203ENST00000578105 SPATA32Q96LK8 384 aa9.69□□□□□ -0.86
SKA2-203ENST00000578105 NACAP1Q9BZK3 213 aa9.69□□□□□ -0.86
SKA2-203ENST00000578105 RBSNQ9H1K0 784 aa9.69□□□□□ -0.86
SKA2-203ENST00000578105 NIP7Q9Y221 180 aaKnown RBP eCLIP9.69□□□□□ -0.86
SKA2-203ENST00000578105 NDUFB9Q9Y6M9 179 aa9.69□□□□□ -0.86
SKA2-203ENST00000578105 TIAM2Q8IVF5 1701 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 THSD7AQ9UPZ6 1657 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 NID2Q14112 1375 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 PTPDC1A2A3K4 754 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 PATL2C9JE40 543 aaKnown RBP9.68□□□□□ -0.86
SKA2-203ENST00000578105 LCE2BO14633 110 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 GADD45BO75293 160 aaPredicted RBP9.68□□□□□ -0.86
SKA2-203ENST00000578105 RPS6KA4O75676 772 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 CCDC192P0DO97 292 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 PDE6AP16499 860 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 ITPK1Q13572 414 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 PPP2R5BQ15173 497 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 CDC37L1Q7L3B6 337 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 BRAPQ7Z569 592 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 ZSCAN30Q86W11 494 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 TMTC2Q8N394 836 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 AIDAQ96BJ3 306 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 LARP6Q9BRS8 491 aaKnown RBP9.68□□□□□ -0.86
SKA2-203ENST00000578105 KRT23Q9C075 422 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 PUS7LQ9H0K6 701 aaKnown RBP9.68□□□□□ -0.86
SKA2-203ENST00000578105 RNF41Q9H4P4 317 aaPredicted RBP9.68□□□□□ -0.86
SKA2-203ENST00000578105 BSDC1Q9NW68 430 aaPredicted RBP9.68□□□□□ -0.86
SKA2-203ENST00000578105 RBM27Q9P2N5 1060 aaKnown RBP9.68□□□□□ -0.86
SKA2-203ENST00000578105 CCDC39Q9UFE4 941 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 NSFL1CQ9UNZ2 370 aaKnown RBP9.68□□□□□ -0.86
SKA2-203ENST00000578105 CCDC9Q9Y3X0 531 aaKnown RBP9.68□□□□□ -0.86
SKA2-203ENST00000578105 TAF6LQ9Y6J9 622 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 KAT6BQ8WYB5 2073 aa9.68□□□□□ -0.86
SKA2-203ENST00000578105 COL24A1Q17RW2 1714 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms