RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 PRC1O43663 620 aa32.68■■■□□ 2.82
LIMD2-203ENST00000578067 SERPINB2P05120 415 aa32.68■■■□□ 2.82
LIMD2-203ENST00000578067 L1TD1Q5T7N2 865 aaKnown RBP32.68■■■□□ 2.82
LIMD2-203ENST00000578067 IFNL3Q8IZI9 196 aa32.68■■■□□ 2.82
LIMD2-203ENST00000578067 KLRK1P26718 216 aa32.68■■■□□ 2.82
LIMD2-203ENST00000578067 EVCP57679 992 aa32.68■■■□□ 2.82
LIMD2-203ENST00000578067 TRDNQ13061 729 aa32.68■■■□□ 2.82
LIMD2-203ENST00000578067 GPT2Q8TD30 523 aa32.68■■■□□ 2.82
LIMD2-203ENST00000578067 RAI14Q9P0K7 980 aa32.68■■■□□ 2.82
LIMD2-203ENST00000578067 CYP7A1P22680 504 aa32.67■■■□□ 2.82
LIMD2-203ENST00000578067 HIBADHP31937 336 aaKnown RBP32.67■■■□□ 2.82
LIMD2-203ENST00000578067 ST5P78524 1137 aa32.67■■■□□ 2.82
LIMD2-203ENST00000578067 TBC1D10CQ8IV04 446 aa32.67■■■□□ 2.82
LIMD2-203ENST00000578067 LCORLQ8N3X6 602 aa32.67■■■□□ 2.82
LIMD2-203ENST00000578067 CHMP4CQ96CF2 233 aa32.67■■■□□ 2.82
LIMD2-203ENST00000578067 NAPBQ9H115 298 aa32.67■■■□□ 2.82
LIMD2-203ENST00000578067 EPB41L4AQ9HCS5 686 aaPredicted RBP32.67■■■□□ 2.82
LIMD2-203ENST00000578067 PDS5AQ29RF7 1337 aaKnown RBP32.66■■■□□ 2.82
LIMD2-203ENST00000578067 GSG1L2A8MUP6 293 aa32.66■■■□□ 2.82
LIMD2-203ENST00000578067 JAK2O60674 1132 aa32.66■■■□□ 2.82
LIMD2-203ENST00000578067 PDIA3P30101 505 aaKnown RBP32.66■■■□□ 2.82
LIMD2-203ENST00000578067 MBD3O95983 291 aa32.65■■■□□ 2.82
LIMD2-203ENST00000578067 ANTXR2P58335 489 aa32.65■■■□□ 2.82
LIMD2-203ENST00000578067 SMARCC2Q8TAQ2 1214 aa32.65■■■□□ 2.82
LIMD2-203ENST00000578067 TMEM87AQ8NBN3 555 aa32.65■■■□□ 2.82
LIMD2-203ENST00000578067 TFCP2L1Q9NZI6 479 aa32.65■■■□□ 2.82
LIMD2-203ENST00000578067 ISY1Q9ULR0 285 aaKnown RBP32.65■■■□□ 2.82
LIMD2-203ENST00000578067 RPGRQ92834 1020 aaKnown RBP32.64■■■□□ 2.82
LIMD2-203ENST00000578067 NACAP1Q9BZK3 213 aa32.64■■■□□ 2.82
LIMD2-203ENST00000578067 SLC4A4Q9Y6R1 1079 aa32.64■■■□□ 2.82
LIMD2-203ENST00000578067 CAVIN1Q6NZI2 390 aaKnown RBP32.63■■■□□ 2.81
LIMD2-203ENST00000578067 USP48Q86UV5 1035 aa32.63■■■□□ 2.81
LIMD2-203ENST00000578067 MIGA1Q8NAN2 632 aa32.63■■■□□ 2.81
LIMD2-203ENST00000578067 NAP1L2Q9ULW6 460 aaPredicted RBP32.63■■■□□ 2.81
LIMD2-203ENST00000578067 PLSCR1O15162 318 aa32.63■■■□□ 2.81
LIMD2-203ENST00000578067 CRY2Q49AN0 593 aa32.63■■■□□ 2.81
LIMD2-203ENST00000578067 GDPD2Q9HCC8 539 aa32.63■■■□□ 2.81
LIMD2-203ENST00000578067 GPHNQ9NQX3 736 aaPredicted RBP32.63■■■□□ 2.81
LIMD2-203ENST00000578067 CNPY2Q9Y2B0 182 aa32.63■■■□□ 2.81
LIMD2-203ENST00000578067 PRKAB2O43741 272 aa32.62■■■□□ 2.81
LIMD2-203ENST00000578067 CDC37L1Q7L3B6 337 aa32.62■■■□□ 2.81
LIMD2-203ENST00000578067 NSUN7Q8NE18 718 aaKnown RBP32.62■■■□□ 2.81
LIMD2-203ENST00000578067 ZBTB22O15209 634 aa32.61■■■□□ 2.81
LIMD2-203ENST00000578067 CCT2P78371 535 aaKnown RBP32.61■■■□□ 2.81
LIMD2-203ENST00000578067 ADGRA1Q86SQ6 560 aa32.61■■■□□ 2.81
LIMD2-203ENST00000578067 LEMD3Q9Y2U8 911 aa32.61■■■□□ 2.81
LIMD2-203ENST00000578067 IRS2Q9Y4H2 1338 aa32.61■■■□□ 2.81
LIMD2-203ENST00000578067 ANKIB1Q9P2G1 1089 aa32.61■■■□□ 2.81
LIMD2-203ENST00000578067 MAGEB6P1A0A0J9YX57 407 aa32.6■■■□□ 2.81
LIMD2-203ENST00000578067 CTDNEP1O95476 244 aa32.6■■■□□ 2.81
LIMD2-203ENST00000578067 HMGN5P82970 282 aaKnown RBP32.6■■■□□ 2.81
LIMD2-203ENST00000578067 DDR1Q08345 913 aa32.6■■■□□ 2.81
LIMD2-203ENST00000578067 FAM184AQ8NB25 1140 aa32.6■■■□□ 2.81
LIMD2-203ENST00000578067 DDX11Q96FC9 970 aa32.6■■■□□ 2.81
LIMD2-203ENST00000578067 TDO2P48775 406 aa32.59■■■□□ 2.81
LIMD2-203ENST00000578067 POLRMTO00411 1230 aaKnown RBP32.58■■■□□ 2.81
LIMD2-203ENST00000578067 APBA3O96018 575 aa32.58■■■□□ 2.81
LIMD2-203ENST00000578067 NAA16Q6N069 864 aaPredicted RBP32.58■■■□□ 2.81
LIMD2-203ENST00000578067 TXNRD3Q86VQ6 643 aa32.58■■■□□ 2.81
LIMD2-203ENST00000578067 NCOA5Q9HCD5 579 aaKnown RBP32.58■■■□□ 2.81
LIMD2-203ENST00000578067 NSFL1CQ9UNZ2 370 aaKnown RBP32.58■■■□□ 2.81
LIMD2-203ENST00000578067 CACNA1SQ13698 1873 aa32.58■■■□□ 2.81
LIMD2-203ENST00000578067 XDHP47989 1333 aa32.58■■■□□ 2.81
LIMD2-203ENST00000578067 PTPDC1A2A3K4 754 aa32.58■■■□□ 2.81
LIMD2-203ENST00000578067 DNM1Q05193 864 aaKnown RBP32.58■■■□□ 2.81
LIMD2-203ENST00000578067 CYB5R4Q7L1T6 521 aa32.58■■■□□ 2.81
LIMD2-203ENST00000578067 RBM17Q96I25 401 aaKnown RBP32.58■■■□□ 2.81
LIMD2-203ENST00000578067 BRPF3Q9ULD4 1205 aa32.58■■■□□ 2.81
LIMD2-203ENST00000578067 KIF3AQ9Y496 699 aa32.58■■■□□ 2.81
LIMD2-203ENST00000578067 EP400Q96L91 3159 aa32.57■■■□□ 2.81
LIMD2-203ENST00000578067 KLF18A0A0U1RQI7 1052 aa32.57■■■□□ 2.8
LIMD2-203ENST00000578067 RIOK1Q9BRS2 568 aaKnown RBP32.56■■■□□ 2.8
LIMD2-203ENST00000578067 NEDD4P46934 1319 aa32.56■■■□□ 2.8
LIMD2-203ENST00000578067 B4E1Z4 1266 aa32.56■■■□□ 2.8
LIMD2-203ENST00000578067 CTDSPL2Q05D32 466 aa32.56■■■□□ 2.8
LIMD2-203ENST00000578067 CSPP1Q1MSJ5 1256 aa32.56■■■□□ 2.8
LIMD2-203ENST00000578067 ZSCAN23Q3MJ62 389 aa32.56■■■□□ 2.8
LIMD2-203ENST00000578067 GADD45BO75293 160 aaPredicted RBP32.55■■■□□ 2.8
LIMD2-203ENST00000578067 ZNF827Q17R98 1081 aa32.55■■■□□ 2.8
LIMD2-203ENST00000578067 AKNAD1Q5T1N1 836 aa32.55■■■□□ 2.8
LIMD2-203ENST00000578067 FERMT3Q86UX7 667 aa32.55■■■□□ 2.8
LIMD2-203ENST00000578067 CNNM2Q9H8M5 875 aa32.55■■■□□ 2.8
LIMD2-203ENST00000578067 ANGEL1Q9UNK9 670 aaKnown RBP32.55■■■□□ 2.8
LIMD2-203ENST00000578067 SALL1Q9NSC2 1324 aa32.55■■■□□ 2.8
LIMD2-203ENST00000578067 CHAF1AQ13111 956 aaPredicted RBP32.55■■■□□ 2.8
LIMD2-203ENST00000578067 ZNF384Q8TF68 577 aa32.55■■■□□ 2.8
LIMD2-203ENST00000578067 AKT1S1Q96B36 256 aa32.55■■■□□ 2.8
LIMD2-203ENST00000578067 NSUN4Q96CB9 384 aaKnown RBP32.55■■■□□ 2.8
LIMD2-203ENST00000578067 TMEM87BQ96K49 555 aa32.55■■■□□ 2.8
LIMD2-203ENST00000578067 RBM27Q9P2N5 1060 aaKnown RBP32.55■■■□□ 2.8
LIMD2-203ENST00000578067 TCHHQ07283 1943 aa32.54■■■□□ 2.8
LIMD2-203ENST00000578067 RXRBP28702 533 aa32.54■■■□□ 2.8
LIMD2-203ENST00000578067 MRE11P49959 708 aa32.54■■■□□ 2.8
LIMD2-203ENST00000578067 ZNF445P59923 1031 aa32.54■■■□□ 2.8
LIMD2-203ENST00000578067 GAS2L3Q86XJ1 694 aa32.54■■■□□ 2.8
LIMD2-203ENST00000578067 TIAM2Q8IVF5 1701 aa32.54■■■□□ 2.8
LIMD2-203ENST00000578067 NKX2-3Q8TAU0 364 aa32.54■■■□□ 2.8
LIMD2-203ENST00000578067 MYH13Q9UKX3 1938 aa32.54■■■□□ 2.8
LIMD2-203ENST00000578067 GOLGA8BA8MQT2 603 aa32.53■■■□□ 2.8
LIMD2-203ENST00000578067 H3BQV1 296 aa32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms