RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 B3GALT4O96024 378 aa9.41□□□□□ -0.9
SMCHD1-202ENST00000577300 SPINK2P20155 84 aa9.41□□□□□ -0.9
SMCHD1-202ENST00000577300 PTPN12Q05209 780 aaKnown RBP9.41□□□□□ -0.9
SMCHD1-202ENST00000577300 SOX4Q06945 474 aaPredicted RBP9.41□□□□□ -0.9
SMCHD1-202ENST00000577300 HP1BP3Q5SSJ5 553 aaPredicted RBP9.41□□□□□ -0.9
SMCHD1-202ENST00000577300 C2CD4AQ8NCU7 369 aaPredicted RBP9.41□□□□□ -0.9
SMCHD1-202ENST00000577300 EHD4Q9H223 541 aa9.41□□□□□ -0.9
SMCHD1-202ENST00000577300 ZNF576Q9H609 170 aa9.41□□□□□ -0.9
SMCHD1-202ENST00000577300 ZFYVE1Q9HBF4 777 aa9.41□□□□□ -0.9
SMCHD1-202ENST00000577300 DRD2P14416 443 aa9.4□□□□□ -0.9
SMCHD1-202ENST00000577300 MAOBP27338 520 aa9.4□□□□□ -0.9
SMCHD1-202ENST00000577300 RXRBP28702 533 aa9.4□□□□□ -0.9
SMCHD1-202ENST00000577300 POU4F3Q15319 338 aa9.4□□□□□ -0.9
SMCHD1-202ENST00000577300 DDX54Q8TDD1 881 aaKnown RBP9.4□□□□□ -0.9
SMCHD1-202ENST00000577300 ALKBH8Q96BT7 664 aaKnown RBP9.4□□□□□ -0.9
SMCHD1-202ENST00000577300 RBCK1Q9BYM8 510 aa9.4□□□□□ -0.9
SMCHD1-202ENST00000577300 WDR64B1ANS9 1081 aa9.39□□□□□ -0.91
SMCHD1-202ENST00000577300 EIF1AYO14602 144 aaKnown RBP9.39□□□□□ -0.91
SMCHD1-202ENST00000577300 DTX1Q86Y01 620 aa9.39□□□□□ -0.91
SMCHD1-202ENST00000577300 GIMAP7Q8NHV1 300 aa9.39□□□□□ -0.91
SMCHD1-202ENST00000577300 EZH1Q92800 747 aaPredicted RBP9.39□□□□□ -0.91
SMCHD1-202ENST00000577300 CCDC74AQ96AQ1 378 aa9.39□□□□□ -0.91
SMCHD1-202ENST00000577300 DMRTB1Q96MA1 342 aa9.39□□□□□ -0.91
SMCHD1-202ENST00000577300 MFSD14AQ96MC6 490 aa9.39□□□□□ -0.91
SMCHD1-202ENST00000577300 TRIM56Q9BRZ2 755 aaKnown RBP9.39□□□□□ -0.91
SMCHD1-202ENST00000577300 NIF3L1Q9GZT8 377 aa9.39□□□□□ -0.91
SMCHD1-202ENST00000577300 FAM95CA0A1B0GW59 222 aa9.38□□□□□ -0.91
SMCHD1-202ENST00000577300 CTSBP07858 339 aa9.38□□□□□ -0.91
SMCHD1-202ENST00000577300 ADH5P11766 374 aa9.38□□□□□ -0.91
SMCHD1-202ENST00000577300 USP11P51784 963 aa9.38□□□□□ -0.91
SMCHD1-202ENST00000577300 CDPF1Q6NVV7 123 aa9.38□□□□□ -0.91
SMCHD1-202ENST00000577300 PRPF40BQ6NWY9 871 aaKnown RBP9.38□□□□□ -0.91
SMCHD1-202ENST00000577300 TMC1Q8TDI8 760 aa9.38□□□□□ -0.91
SMCHD1-202ENST00000577300 YIPF2Q9BWQ6 316 aa9.38□□□□□ -0.91
SMCHD1-202ENST00000577300 CPSF6Q16630 551 aaKnown RBP eCLIP9.37□□□□□ -0.91
SMCHD1-202ENST00000577300 PAOXQ6QHF9 649 aa9.37□□□□□ -0.91
SMCHD1-202ENST00000577300 FBLIM1Q8WUP2 373 aa9.37□□□□□ -0.91
SMCHD1-202ENST00000577300 ABCB6Q9NP58 842 aa9.37□□□□□ -0.91
SMCHD1-202ENST00000577300 SOWAHDA6NJG2 315 aa9.36□□□□□ -0.91
SMCHD1-202ENST00000577300 F13BP05160 661 aa9.36□□□□□ -0.91
SMCHD1-202ENST00000577300 NFKBIBQ15653 356 aa9.36□□□□□ -0.91
SMCHD1-202ENST00000577300 RPS26P11Q5JNZ5 115 aaPredicted RBP9.36□□□□□ -0.91
SMCHD1-202ENST00000577300 CSRNP1Q96S65 589 aa9.36□□□□□ -0.91
SMCHD1-202ENST00000577300 CORO1BQ9BR76 489 aa9.36□□□□□ -0.91
SMCHD1-202ENST00000577300 ATG3Q9NT62 314 aa9.36□□□□□ -0.91
SMCHD1-202ENST00000577300 PIM2Q9P1W9 311 aa9.36□□□□□ -0.91
SMCHD1-202ENST00000577300 GNEQ9Y223 722 aaKnown RBP9.36□□□□□ -0.91
SMCHD1-202ENST00000577300 GP2P55259 537 aaKnown RBP9.35□□□□□ -0.91
SMCHD1-202ENST00000577300 KRTAP9-2Q9BYQ4 174 aa9.35□□□□□ -0.91
SMCHD1-202ENST00000577300 TRAK1Q9UPV9 953 aa9.35□□□□□ -0.91
SMCHD1-202ENST00000577300 ACTL7BQ9Y614 415 aa9.35□□□□□ -0.91
SMCHD1-202ENST00000577300 TMEM238LA0A1B0GVL6 79 aa9.34□□□□□ -0.91
SMCHD1-202ENST00000577300 GADD45BO75293 160 aaPredicted RBP9.34□□□□□ -0.91
SMCHD1-202ENST00000577300 AP3B2Q13367 1082 aa9.34□□□□□ -0.91
SMCHD1-202ENST00000577300 MCTP1Q6DN14 999 aa9.34□□□□□ -0.91
SMCHD1-202ENST00000577300 GLIS3Q8NEA6 775 aa9.34□□□□□ -0.91
SMCHD1-202ENST00000577300 SYNGAP1Q96PV0 1343 aa9.33□□□□□ -0.92
SMCHD1-202ENST00000577300 ADAMTS4O75173 837 aa9.33□□□□□ -0.92
SMCHD1-202ENST00000577300 ECEL1O95672 775 aa9.33□□□□□ -0.92
SMCHD1-202ENST00000577300 FBXL6Q8N531 539 aa9.33□□□□□ -0.92
SMCHD1-202ENST00000577300 METTL22Q9BUU2 404 aaPredicted RBP9.33□□□□□ -0.92
SMCHD1-202ENST00000577300 OSBPL1AQ9BXW6 950 aa9.33□□□□□ -0.92
SMCHD1-202ENST00000577300 GSX1Q9H4S2 264 aaPredicted RBP9.33□□□□□ -0.92
SMCHD1-202ENST00000577300 RAD18Q9NS91 495 aa9.33□□□□□ -0.92
SMCHD1-202ENST00000577300 PRKAG2Q9UGJ0 569 aa9.33□□□□□ -0.92
SMCHD1-202ENST00000577300 LEMD3Q9Y2U8 911 aa9.33□□□□□ -0.92
SMCHD1-202ENST00000577300 OAS3Q9Y6K5 1087 aaKnown RBP9.33□□□□□ -0.92
SMCHD1-202ENST00000577300 COL17A1Q9UMD9 1497 aaPredicted RBP9.33□□□□□ -0.92
SMCHD1-202ENST00000577300 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.32□□□□□ -0.92
SMCHD1-202ENST00000577300 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.32□□□□□ -0.92
SMCHD1-202ENST00000577300 HOXA10P31260 410 aaPredicted RBP9.32□□□□□ -0.92
SMCHD1-202ENST00000577300 GRM2Q14416 872 aa9.32□□□□□ -0.92
SMCHD1-202ENST00000577300 AKAP4Q5JQC9 854 aa9.32□□□□□ -0.92
SMCHD1-202ENST00000577300 ZAR1Q86SH2 424 aa9.32□□□□□ -0.92
SMCHD1-202ENST00000577300 BRD1O95696 1058 aa9.31□□□□□ -0.92
SMCHD1-202ENST00000577300 WNT11O96014 354 aa9.31□□□□□ -0.92
SMCHD1-202ENST00000577300 FOSL1P15407 271 aa9.31□□□□□ -0.92
SMCHD1-202ENST00000577300 MAP7Q14244 749 aa9.31□□□□□ -0.92
SMCHD1-202ENST00000577300 EPS8L3Q8TE67 593 aaKnown RBP9.31□□□□□ -0.92
SMCHD1-202ENST00000577300 ACSS3Q9H6R3 686 aa9.31□□□□□ -0.92
SMCHD1-202ENST00000577300 DCTN4Q9UJW0 460 aa9.31□□□□□ -0.92
SMCHD1-202ENST00000577300 AOC2O75106 756 aa9.3□□□□□ -0.92
SMCHD1-202ENST00000577300 ADMP35318 185 aa9.3□□□□□ -0.92
SMCHD1-202ENST00000577300 IRAK1P51617 712 aa9.3□□□□□ -0.92
SMCHD1-202ENST00000577300 DYMQ7RTS9 669 aa9.3□□□□□ -0.92
SMCHD1-202ENST00000577300 TMC7Q7Z402 723 aa9.3□□□□□ -0.92
SMCHD1-202ENST00000577300 SHISA5Q8N114 240 aa9.3□□□□□ -0.92
SMCHD1-202ENST00000577300 GATA6Q92908 595 aa9.3□□□□□ -0.92
SMCHD1-202ENST00000577300 TBC1D32Q96NH3 1257 aa9.3□□□□□ -0.92
SMCHD1-202ENST00000577300 WDR18Q9BV38 432 aa9.3□□□□□ -0.92
SMCHD1-202ENST00000577300 NFICP08651 508 aa9.29□□□□□ -0.92
SMCHD1-202ENST00000577300 FAAP100Q0VG06 881 aa9.29□□□□□ -0.92
SMCHD1-202ENST00000577300 MSMPQ1L6U9 139 aa9.29□□□□□ -0.92
SMCHD1-202ENST00000577300 SEMA6CQ9H3T2 930 aa9.29□□□□□ -0.92
SMCHD1-202ENST00000577300 FAM105AQ9NUU6 356 aa9.29□□□□□ -0.92
SMCHD1-202ENST00000577300 AP4E1Q9UPM8 1137 aa9.29□□□□□ -0.92
SMCHD1-202ENST00000577300 KRTAP9-6A0A140TA67 174 aa9.28□□□□□ -0.92
SMCHD1-202ENST00000577300 RAB6AP20340 208 aa9.28□□□□□ -0.92
SMCHD1-202ENST00000577300 PDE3AQ14432 1141 aa9.28□□□□□ -0.92
SMCHD1-202ENST00000577300 BIN2Q9UBW5 565 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms